FFCP PHASE1:Hg19::chr12:53715328..53715411,-: Difference between revisions
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{{FFCP | 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643983117,17.4052940810506,12.7581007519558,25.8811780588666,50.3834462945125,18.5954668555592,29.3981471906747,29.1268422065005,26.6933218474264,36.8885369818443,34.7960245975979,15.9462638800167,19.9064723210551,51.6693260066753,32.0239689848145,61.8055151493673,76.4467467344097,48.5435035668512,46.3413325821669,79.5667606542794,43.0156586839398,17.490239285938,38.4056698156104,18.4131272105658,32.7988627632336,26.3371110523752,13.4881372702565,18.420554922326,11.653271711172,14.5632618610936,34.2817506861537,19.7789742047663,9.20411180101551,14.2769420259154,26.2054408397738,29.0205519435441,29.8988615590337,49.6760364446454,25.5526003963002,20.0204378557429,30.8320144280226,21.8862055496339,36.9120275727442,34.3866164942561,30.9049899488078,33.90078692459,27.9448002950216,12.6295283236398,3.90539049306924,13.0212681795746,13.8246466222717,24.6138664058199,33.4437237782881,16.3749688868467,44.495424822984,25.1691982450003,7.49982570229601,15.1327674998471,13.9602088974425,17.9853131167525,29.715294004484,51.2791244623218,22.6364172457392,14.0697347262042,14.4700101838268,50.4687700574544,26.0281480427442,20.6436834196852,7.54154831596809,21.5809565751618,20.0894918512089,46.4244321120036,21.0210742670302,23.5157830341199,35.8690898633289,51.7274342888157,39.8135443572907,16.8359386593353,28.388614490336,30.558607399817,17.2814915453523,23.6625047351153,37.9845722345115,40.7320074748774,14.8185467566825,21.3069387745967,25.1267172388099,43.9547911929619,36.2411599024847,48.5843656395453,30.1137274706205,11.0062902321942,25.0497248729243,53.3514638415572,31.5712145488441,36.0266773731643,37.80064728066,43.286913043035,33.5449863655711,83.4448522097807,26.4184976241679,19.7565844756338,34.0952914386173,24.4564994107992,15.1991959487421,9.89841497826829,14.9194435007358,10.9907168121022,24.9366879274206,24.8093587444213,24.2478508388022,29.1994232520305,35.179286885575,24.9975514047921,23.996851276667,27.7635128744522,16.0674005414234,22.019005603418,18.0607874770829,50.0135852152395,17.1338555281105,29.6718469431457,28.5674493878316,39.0594769075089,24.4953083174652,28.9859796622939,64.3448766658903,40.9745894863858,72.2181455765191,50.484470722281,45.1597414898797,34.6443771246365,41.3667439832419,41.5267266235952,44.2140814757694,8.29169439458779,19.8591352054839,25.8013118100187,29.0438606385763,46.7623707212684,36.4999320059644,33.639558774184,24.313214462259,22.6371251633206,33.0929456803381,40.7257628291484,24.7182034563536,21.946994850159,21.9555835320369,27.9213211335643,31.8047490715592,21.2379510515634,44.6431254469737,18.7712753922763,22.859150062196,29.7034210170489,19.9727032255654,24.1528552309231,34.3008286764459|short_description=p1@AAAS}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8086 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13666 | |||
|TSSclassifier=S | |||
|UniProt=Q5JB47,F8VUB6,F8VVJ5,Q9NRG9 | |||
|association_with_transcript=0bp_to_ENST00000394384,ENST00000546562,ENST00000547757,ENST00000548880,ENST00000549983,ENST00000552161,NM_001173466,NM_015665,uc001scr.3,uc001scs.3_5end | |||
|coexpression_cluster_id=C1171 | |||
|description=CAGE_peak_1_at_AAAS_5end | |||
|id=chr12:53715328..53715411,- | |||
|ontology_enrichment_celltype=CL:0002321!1.33e-17!248;CL:0000066!2.96e-17!254;CL:0000220!7.77e-17!246;CL:0000548!3.31e-16!679;CL:0000004!3.31e-16!679;CL:0000255!3.31e-16!679;CL:0000012!6.61e-16!682;CL:0000055!9.67e-11!180;CL:0000144!9.65e-10!625;CL:0000003!7.71e-09!722;CL:0000222!1.70e-08!119;CL:0000221!9.09e-08!71;CL:0000183!3.38e-07!59;CL:0000393!6.12e-07!60;CL:0000211!6.12e-07!60;CL:0000333!6.42e-07!41;CL:0000133!7.19e-07!59;CL:1000449!8.62e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000449;6.71e-08;15!CL:1000497;2.82e-07;17!CL:0002518;2.82e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.23e-17,253;CL:0002321,1.41e-17,250;CL:0000222,1.91e-08,121;CL:1000449,7.09e-08,15;CL:0000221,1.61e-07,72;CL:1000497,3.14e-07,17;CL:0002518,3.14e-07,17;CL:0000333,6.42e-07,41;CL:0000133,7.19e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.84e-13!239;DOID:162!2.21e-13!235;DOID:2531!1.53e-09!51;DOID:0060083!1.53e-09!51;DOID:1240!3.95e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;9.22e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.84e-13,239;DOID:162,2.21e-13,235;DOID:2531,1.53e-09,51;DOID:0060083,1.53e-09,51;DOID:1240,3.95e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0003104!5.26e-09!238;UBERON:0009142!5.26e-09!238;UBERON:0003914!5.52e-09!118;UBERON:0000490!8.47e-08!138;UBERON:0002049!4.79e-07!79;UBERON:0007798!4.79e-07!79;UBERON:0004211!8.62e-07!16;UBERON:0001285!8.62e-07!16;UBERON:0007684!8.62e-07!16;UBERON:0003220!8.62e-07!16;UBERON:0004208!8.62e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;6.71e-08;15!UBERON:0004819;6.71e-08;15!UBERON:0001285;6.71e-08;15!UBERON:0007684;6.71e-08;15!UBERON:0002113;9.73e-08;24!UBERON:0011143;9.73e-08;24!UBERON:0006554;2.16e-07;30!UBERON:0001008;2.16e-07;30!UBERON:0003914;6.79e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.33e-09,117;UBERON:0000490,4.83e-09,148;UBERON:0004211,7.09e-08,15;UBERON:0009773,7.09e-08,15;UBERON:0001231,7.09e-08,15;UBERON:0001285,7.09e-08,15;UBERON:0007684,7.09e-08,15;UBERON:0004208,7.09e-08,15;UBERON:0002049,2.61e-07,78;UBERON:0007798,2.61e-07,78;UBERON:0002100,2.67e-07,199;UBERON:0007503,3.71e-07,78;UBERON:0000055,5.38e-07,68;UBERON:0006555,5.96e-07,16;UBERON:0004819,5.96e-07,16 | |||
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| |||
|short_description=p1@AAAS | |||
}} |
Revision as of 23:17, 10 September 2013
Short description: | p1@AAAS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AAAS_5end |
Coexpression cluster: | C1171_Alveolar_Renal_Bronchial_Mesenchymal_Smooth_Keratinocyte_embryonic |
Association with transcript: | 0bp_to_ENST00000394384, ENST00000546562, ENST00000547757, ENST00000548880, ENST00000549983, ENST00000552161, NM_001173466, NM_015665, uc001scr.3, uc001scs.3_5end |
EntrezGene: | AAAS |
HGNC: | 13666 |
UniProt: | Q5JB47F8VUB6F8VVJ5Q9NRG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.23e-17 | 253 |
embryonic cell | 1.41e-17 | 250 |
mesodermal cell | 1.91e-08 | 121 |
epithelial cell of nephron | 7.09e-08 | 15 |
ectodermal cell | 1.61e-07 | 72 |
kidney cell | 3.14e-07 | 17 |
kidney epithelial cell | 3.14e-07 | 17 |
migratory neural crest cell | 6.42e-07 | 41 |
neurectodermal cell | 7.19e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 2.33e-09 | 117 |
unilaminar epithelium | 4.83e-09 | 148 |
nephron epithelium | 7.09e-08 | 15 |
renal tubule | 7.09e-08 | 15 |
nephron tubule | 7.09e-08 | 15 |
nephron | 7.09e-08 | 15 |
uriniferous tubule | 7.09e-08 | 15 |
nephrogenic mesenchyme | 7.09e-08 | 15 |
vasculature | 2.61e-07 | 78 |
vascular system | 2.61e-07 | 78 |
trunk | 2.67e-07 | 199 |
epithelial vesicle | 3.71e-07 | 78 |
vessel | 5.38e-07 | 68 |
excretory tube | 5.96e-07 | 16 |
kidney epithelium | 5.96e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.84e-13 | 239 |
cancer | 2.21e-13 | 235 |
hematologic cancer | 1.53e-09 | 51 |
immune system cancer | 1.53e-09 | 51 |
leukemia | 3.95e-08 | 39 |
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