FFCP PHASE1:Hg19::chr12:51420055..51420066,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4891|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10908|TSSclassifier=S|UniProt=P49281|association_with_transcript=-131bp_to_ENST00000541174,NM_001174129,uc001rxh.1_5end|coexpression_cluster_id=C0|description=CAGE_peak_6_at_SLC11A2_5end|id=chr12:51420055..51420066,-|ontology_enrichment_celltype=CL:0000839!1.08e-19!70;CL:0000557!4.31e-19!71;CL:0002009!1.76e-17!65;CL:0002057!2.97e-17!42;CL:0002194!2.10e-16!63;CL:0000576!2.10e-16!63;CL:0000040!2.10e-16!63;CL:0000559!2.10e-16!63;CL:0000860!2.40e-16!45;CL:0000766!1.69e-15!76;CL:0002031!1.85e-14!124;CL:0002087!3.23e-11!119;CL:0000738!3.79e-11!140;CL:0000763!2.60e-10!112;CL:0000049!2.60e-10!112;CL:0000037!1.91e-08!172;CL:0000566!1.91e-08!172;CL:0002032!2.42e-08!165;CL:0000837!2.42e-08!165;CL:0000988!9.22e-08!182|ontology_enrichment_celltype_v019=CL:0000860;2.33e-42;33!CL:0002057;2.33e-42;33!CL:0000473;2.16e-36;39!CL:0000234;2.16e-36;39!CL:0000576;1.57e-24;48!CL:0000766;5.03e-17;69!CL:0000763;1.84e-07;100|ontology_enrichment_celltype_v019_2=CL:0000473,6.64e-48,48;CL:0000234,6.64e-48,48;CL:0000860,6.05e-47,42;CL:0002057,6.05e-47,42;CL:0002194,7.49e-47,59;CL:0000576,7.49e-47,59;CL:0000040,7.49e-47,59;CL:0000559,7.49e-47,59;CL:0002009,4.10e-45,61;CL:0000839,3.20e-41,66;CL:0000557,1.64e-40,67;CL:0000766,2.17e-40,72;CL:0000763,1.21e-26,108;CL:0000049,1.21e-26,108;CL:0002087,1.50e-22,115;CL:0002031,2.51e-21,120;CL:0000738,1.24e-19,136;CL:0002032,8.53e-17,161;CL:0000837,8.53e-17,161;CL:0000037,8.58e-16,168;CL:0000988,1.27e-14,177|ontology_enrichment_development_v019=CL:0002057;2.11e-34;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!8.07e-17!80;UBERON:0002390!2.64e-15!102;UBERON:0003061!2.64e-15!102;UBERON:0001474!4.40e-14!86;UBERON:0002405!5.05e-14!115;UBERON:0002193!5.82e-13!112;UBERON:0004765!3.44e-11!101;UBERON:0001434!3.44e-11!101;UBERON:0001049!5.75e-07!57;UBERON:0005068!5.75e-07!57;UBERON:0006241!5.75e-07!57;UBERON:0007135!5.75e-07!57|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.90e-35,76;UBERON:0001474,6.38e-32,82;UBERON:0002405,1.32e-29,93;UBERON:0004765,1.68e-28,90;UBERON:0002390,9.52e-28,98;UBERON:0003061,9.52e-28,98;UBERON:0001434,5.45e-25,100;UBERON:0002193,1.52e-24,108;UBERON:0002204,2.07e-13,167;UBERON:0003081,9.67e-12,203|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0.487932798790507,0,0.204000691244253,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0.142169232487422,0,2.76997704265939,2.00544447470142,2.38711957787437,0,0.32389366601898,0.257575567634187,0.290796477559129,0.377875943688809,0.242584061187816,1.39457422143411,6.57868620834921,4.95530193432166,2.8769239232215,2.0492856522328,2.12834006899727,4.48169384957604,10.973239620925,1.35426486594342,0.376484679085209,0.545812300115692,0.449446968890169,3.06083892370903,0.962787081228281,1.27867425159808,0.329851300186716,0.598390972864896,0.426224750532694,2.03146467040009,7.37600792098482,6.22822248995575,3.26623264833766,3.65038042894141,2.38907729175628,4.23779651843358,7.73383035573886,3.16462387440884,0,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0,0.270803863765016,0,0,0,0,0,0.14828656316206,0,1.04535523804977,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.087834785693126,0.0654895377488563,0.364295288292542,0.370784442784429,1.29818957461873,1.21890816109487,1.06366368415092,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,7.75560528296651,0,0,0,0.264818361626438,0,0.354668382198357,0,1.06748995729705,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0.161872944368132,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0.272746120590835,0,0.975789649036763,0.265059536642971,0.929551542956147,0.829288440122964,0.504641701751257,2.18986415445498,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.220587945464788,0.217879444092406,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0.882926198829301,0.737930631258681,0,0.219500570817251,0,0,0,0,0,0,0.231860809950154,0,0,0.462985512576611,0,0,0.858486162094873,0.246217006087397,1.63802985597466,0.445893486866185,0,0.16798212819886,0,0.0895585227028483,0,0,0.985326475791887,0.528290604079356,0.414656231081544,0.288239906833923,0.37872730027914,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0.410952645100767,0,0,0.394061520403854,0.646882724578552,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4891 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10908 | |||
|TSSclassifier=S | |||
|UniProt=P49281 | |||
|association_with_transcript=-131bp_to_ENST00000541174,NM_001174129,uc001rxh.1_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_SLC11A2_5end | |||
|id=chr12:51420055..51420066,- | |||
|ontology_enrichment_celltype=CL:0000839!1.08e-19!70;CL:0000557!4.31e-19!71;CL:0002009!1.76e-17!65;CL:0002057!2.97e-17!42;CL:0002194!2.10e-16!63;CL:0000576!2.10e-16!63;CL:0000040!2.10e-16!63;CL:0000559!2.10e-16!63;CL:0000860!2.40e-16!45;CL:0000766!1.69e-15!76;CL:0002031!1.85e-14!124;CL:0002087!3.23e-11!119;CL:0000738!3.79e-11!140;CL:0000763!2.60e-10!112;CL:0000049!2.60e-10!112;CL:0000037!1.91e-08!172;CL:0000566!1.91e-08!172;CL:0002032!2.42e-08!165;CL:0000837!2.42e-08!165;CL:0000988!9.22e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.33e-42;33!CL:0002057;2.33e-42;33!CL:0000473;2.16e-36;39!CL:0000234;2.16e-36;39!CL:0000576;1.57e-24;48!CL:0000766;5.03e-17;69!CL:0000763;1.84e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.64e-48,48;CL:0000234,6.64e-48,48;CL:0000860,6.05e-47,42;CL:0002057,6.05e-47,42;CL:0002194,7.49e-47,59;CL:0000576,7.49e-47,59;CL:0000040,7.49e-47,59;CL:0000559,7.49e-47,59;CL:0002009,4.10e-45,61;CL:0000839,3.20e-41,66;CL:0000557,1.64e-40,67;CL:0000766,2.17e-40,72;CL:0000763,1.21e-26,108;CL:0000049,1.21e-26,108;CL:0002087,1.50e-22,115;CL:0002031,2.51e-21,120;CL:0000738,1.24e-19,136;CL:0002032,8.53e-17,161;CL:0000837,8.53e-17,161;CL:0000037,8.58e-16,168;CL:0000988,1.27e-14,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.11e-34;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.07e-17!80;UBERON:0002390!2.64e-15!102;UBERON:0003061!2.64e-15!102;UBERON:0001474!4.40e-14!86;UBERON:0002405!5.05e-14!115;UBERON:0002193!5.82e-13!112;UBERON:0004765!3.44e-11!101;UBERON:0001434!3.44e-11!101;UBERON:0001049!5.75e-07!57;UBERON:0005068!5.75e-07!57;UBERON:0006241!5.75e-07!57;UBERON:0007135!5.75e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.90e-35,76;UBERON:0001474,6.38e-32,82;UBERON:0002405,1.32e-29,93;UBERON:0004765,1.68e-28,90;UBERON:0002390,9.52e-28,98;UBERON:0003061,9.52e-28,98;UBERON:0001434,5.45e-25,100;UBERON:0002193,1.52e-24,108;UBERON:0002204,2.07e-13,167;UBERON:0003081,9.67e-12,203 | |||
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| |||
|short_description=p6@SLC11A2 | |||
}} |
Revision as of 23:01, 10 September 2013
Short description: | p6@SLC11A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SLC11A2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -131bp_to_ENST00000541174, NM_001174129, uc001rxh.1_5end |
EntrezGene: | SLC11A2 |
HGNC: | 10908 |
UniProt: | P49281 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.64e-48 | 48 |
phagocyte | 6.64e-48 | 48 |
classical monocyte | 6.05e-47 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.05e-47 | 42 |
monopoietic cell | 7.49e-47 | 59 |
monocyte | 7.49e-47 | 59 |
monoblast | 7.49e-47 | 59 |
promonocyte | 7.49e-47 | 59 |
macrophage dendritic cell progenitor | 4.10e-45 | 61 |
myeloid lineage restricted progenitor cell | 3.20e-41 | 66 |
granulocyte monocyte progenitor cell | 1.64e-40 | 67 |
myeloid leukocyte | 2.17e-40 | 72 |
myeloid cell | 1.21e-26 | 108 |
common myeloid progenitor | 1.21e-26 | 108 |
nongranular leukocyte | 1.50e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 2.51e-21 | 120 |
leukocyte | 1.24e-19 | 136 |
hematopoietic oligopotent progenitor cell | 8.53e-17 | 161 |
hematopoietic multipotent progenitor cell | 8.53e-17 | 161 |
hematopoietic stem cell | 8.58e-16 | 168 |
hematopoietic cell | 1.27e-14 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.90e-35 | 76 |
bone element | 6.38e-32 | 82 |
immune system | 1.32e-29 | 93 |
skeletal element | 1.68e-28 | 90 |
hematopoietic system | 9.52e-28 | 98 |
blood island | 9.52e-28 | 98 |
skeletal system | 5.45e-25 | 100 |
hemolymphoid system | 1.52e-24 | 108 |
musculoskeletal system | 2.07e-13 | 167 |
lateral plate mesoderm | 9.67e-12 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.