FFCP PHASE1:Hg19::chr12:20848471..20848483,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=53919|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13819|TSSclassifier=S|UniProt=|association_with_transcript=-11bp_to_ENST00000497911_5end|coexpression_cluster_id=C1305|description=CAGE_peak_8_at_SLCO1C1_5end|id=chr12:20848471..20848483,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000047;3.08e-14;2|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;9.63e-13;82!UBERON:0006222;5.77e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.17e-104!57;UBERON:0005068!8.17e-104!57;UBERON:0006241!8.17e-104!57;UBERON:0007135!8.17e-104!57;UBERON:0002616!1.23e-90!59;UBERON:0001017!1.50e-85!82;UBERON:0005743!6.90e-85!86;UBERON:0002780!1.04e-83!41;UBERON:0001890!1.04e-83!41;UBERON:0006240!1.04e-83!41;UBERON:0003080!1.54e-81!42;UBERON:0000955!1.57e-78!69;UBERON:0006238!1.57e-78!69;UBERON:0002346!1.75e-78!90;UBERON:0000073!7.69e-76!94;UBERON:0001016!7.69e-76!94;UBERON:0001893!7.66e-74!34;UBERON:0002020!1.80e-73!34;UBERON:0003528!1.80e-73!34;UBERON:0003075!3.84e-72!86;UBERON:0007284!3.84e-72!86;UBERON:0002791!6.26e-71!33;UBERON:0001869!2.65e-68!32;UBERON:0000956!1.72e-58!25;UBERON:0000203!1.72e-58!25;UBERON:0003056!3.34e-57!61;UBERON:0002619!7.01e-56!22;UBERON:0001950!1.38e-49!20;UBERON:0007023!8.31e-47!115;UBERON:0000033!3.90e-44!123;UBERON:0000153!1.54e-43!129;UBERON:0007811!1.54e-43!129;UBERON:0000924!1.26e-41!173;UBERON:0006601!1.26e-41!173;UBERON:0004121!2.93e-37!169;UBERON:0000025!6.48e-24!194;UBERON:0003076!3.16e-22!15;UBERON:0003057!3.16e-22!15;UBERON:0000200!2.97e-19!6;UBERON:0001871!7.42e-19!7;UBERON:0002298!3.30e-18!8;UBERON:0004111!5.29e-18!241;UBERON:0000477!7.09e-18!286;UBERON:0000349!7.54e-17!5;UBERON:0002420!8.40e-17!9;UBERON:0007245!8.40e-17!9;UBERON:0010009!8.40e-17!9;UBERON:0010011!8.40e-17!9;UBERON:0000454!8.40e-17!9;UBERON:0002308!3.23e-16!9;UBERON:0000125!3.23e-16!9;UBERON:0001872!6.81e-16!5;UBERON:0000483!9.69e-16!309;UBERON:0000119!1.81e-15!312;UBERON:0004733!6.69e-15!12;UBERON:0002028!6.69e-15!12;UBERON:0007277!6.69e-15!12;UBERON:0004732!1.20e-13!13;UBERON:0000064!1.57e-12!219;UBERON:0000475!4.05e-12!365;UBERON:0009663!2.32e-11!7;UBERON:0001894!3.28e-11!7;UBERON:0006222!3.28e-11!7;UBERON:0001896!1.48e-10!3;UBERON:0005290!1.48e-10!3;UBERON:0010096!1.48e-10!3;UBERON:0002771!1.96e-10!3;UBERON:0002021!6.65e-10!5;UBERON:0002240!7.46e-10!3;UBERON:0006331!1.45e-09!3;UBERON:0000988!2.08e-09!3;UBERON:0000369!4.58e-08!4;UBERON:0002435!4.58e-08!4;UBERON:0000204!4.58e-08!4;UBERON:0010082!4.58e-08!4;UBERON:0001954!5.31e-08!2;UBERON:0003022!5.31e-08!2;UBERON:0002421!5.31e-08!2;UBERON:0002600!5.31e-08!2;UBERON:0002680!8.62e-08!9;UBERON:0001895!8.62e-08!9;UBERON:0010092!8.62e-08!9;UBERON:0000481!1.16e-07!347;UBERON:0001876!1.41e-07!2;UBERON:0001870!2.20e-07!2;UBERON:0001897!2.34e-07!2;UBERON:0000062!3.74e-07!511;UBERON:0002148!8.27e-07!2;UBERON:0009662!8.27e-07!2|ontology_enrichment_uberon_v019=UBERON:0001869;7.48e-48;32!UBERON:0002619;8.42e-47;22!UBERON:0001893;1.01e-42;34!UBERON:0002791;1.11e-41;32!UBERON:0000956;4.03e-41;25!UBERON:0000203;4.03e-41;25!UBERON:0002780;4.37e-40;41!UBERON:0001890;4.37e-40;41!UBERON:0000200;1.55e-39;6!UBERON:0003528;1.05e-38;34!UBERON:0002020;1.05e-38;34!UBERON:0000073;1.29e-36;53!UBERON:0002616;1.29e-36;53!UBERON:0001950;2.05e-36;20!UBERON:0001017;7.86e-24;75!UBERON:0000349;2.17e-22;5!UBERON:0000955;7.53e-19;68!UBERON:0001016;2.86e-17;83!UBERON:0000369;1.68e-15;4!UBERON:0002435;1.68e-15;4!UBERON:0000204;1.68e-15;4!UBERON:0001954;4.54e-15;2!UBERON:0003022;4.54e-15;2!UBERON:0002421;4.54e-15;2!UBERON:0002600;4.54e-15;2!UBERON:0002771;1.19e-14;2!UBERON:0002702;3.08e-14;2!UBERON:0001872;1.63e-12;5!UBERON:0002420;3.66e-12;9!UBERON:0007245;3.66e-12;9!UBERON:0010009;3.66e-12;9!UBERON:0010011;3.66e-12;9!UBERON:0000454;3.66e-12;9!UBERON:0001896;3.81e-10;3!UBERON:0005290;3.81e-10;3!UBERON:0001870;8.55e-10;3!UBERON:0005383;8.55e-10;3!UBERON:0005382;8.55e-10;3!UBERON:0001871;2.00e-09;6!UBERON:0001894;4.41e-09;7!UBERON:0009663;4.41e-09;7!UBERON:0011216;2.16e-08;132!UBERON:0007023;4.57e-08;114!UBERON:0002581;5.77e-08;1!UBERON:0001882;5.77e-08;1!UBERON:0002022;5.77e-08;1!UBERON:0001874;5.77e-08;1!UBERON:0003112;5.77e-08;1!UBERON:0011158;5.77e-08;1!UBERON:0007190;5.77e-08;1!UBERON:0003128;5.77e-08;1!UBERON:0005403;5.77e-08;1!UBERON:0001703;5.77e-08;1!UBERON:0002241;5.77e-08;1!UBERON:0002346;8.40e-08;4!UBERON:0000923;8.40e-08;4!UBERON:0010316;8.40e-08;4!UBERON:0005291;8.40e-08;4!UBERON:0000125;3.65e-07;9!UBERON:0002308;3.65e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0002780,2.45e-59,41;UBERON:0001890,2.45e-59,41;UBERON:0003080,2.45e-59,41;UBERON:0006240,2.45e-59,41;UBERON:0001049,1.21e-57,56;UBERON:0005068,1.21e-57,56;UBERON:0006241,1.21e-57,56;UBERON:0007135,1.21e-57,56;UBERON:0000073,1.24e-55,53;UBERON:0002616,1.24e-55,53;UBERON:0001869,1.18e-54,32;UBERON:0001893,2.41e-51,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=53919 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13819 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-11bp_to_ENST00000497911_5end | |||
|coexpression_cluster_id=C1305 | |||
|description=CAGE_peak_8_at_SLCO1C1_5end | |||
|id=chr12:20848471..20848483,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.08e-14;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.63e-13;82!UBERON:0006222;5.77e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p8@SLCO1C1 | |||
}} |
Revision as of 22:06, 10 September 2013
Short description: | p8@SLCO1C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_SLCO1C1_5end |
Coexpression cluster: | C1305_neuroectodermal_medulla_retina_peripheral_hippocampus_caudate_pituitary |
Association with transcript: | -11bp_to_ENST00000497911_5end |
EntrezGene: | SLCO1C1 |
HGNC: | 13819 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.