FFCP PHASE1:Hg19::chr12:13367481..13367517,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:13367481..13367517,+|id=chr12:13367481..13367517,+|ontology_enrichment_celltype=CL:0000055!1.73e-15!180;CL:0000057!5.84e-13!75;CL:0002371!1.09e-08!591|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000048,4.24e-07,427;CL:0000057,9.23e-07,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!8.34e-10!659;UBERON:0000926!9.36e-10!448;UBERON:0004120!9.36e-10!448;UBERON:0006603!9.36e-10!448;UBERON:0000467!1.32e-09!625;UBERON:0004872!1.85e-09!84;UBERON:0000480!1.92e-09!626;UBERON:0000914!5.82e-09!83;UBERON:0002329!5.82e-09!83;UBERON:0003077!5.82e-09!83;UBERON:0003059!5.82e-09!83;UBERON:0007282!5.82e-09!83;UBERON:0009618!5.82e-09!83;UBERON:0007285!5.82e-09!83;UBERON:0003102!9.03e-08!95;UBERON:0000055!1.17e-07!69;UBERON:0004290!2.13e-07!70;UBERON:0001981!3.76e-07!60;UBERON:0007500!3.76e-07!60;UBERON:0004537!3.76e-07!60;UBERON:0006965!3.76e-07!60;UBERON:0000486!3.94e-07!82;UBERON:0001637!7.98e-07!42;UBERON:0003509!7.98e-07!42;UBERON:0004572!7.98e-07!42|ontology_enrichment_uberon_v019=UBERON:0002067;2.27e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.66e-09,167;UBERON:0007524,3.59e-09,73;UBERON:0004923,4.30e-09,66;UBERON:0002329,8.98e-09,71;UBERON:0003059,8.98e-09,71;UBERON:0007282,8.98e-09,71;UBERON:0004290,8.98e-09,71;UBERON:0009618,8.98e-09,71;UBERON:0003077,1.51e-08,72;UBERON:0007285,1.51e-08,72;UBERON:0000926,5.44e-08,315;UBERON:0004120,5.44e-08,315;UBERON:0006603,5.44e-08,315;UBERON:0000486,6.46e-08,83;UBERON:0002067,1.62e-07,9;UBERON:0004016,1.62e-07,9;UBERON:0010083,1.62e-07,9;UBERON:0007503,2.52e-07,78|phase1_expression=0.363356758541113,1.2846031433459,0.986680828671798,2.00146596706261,0.893922188854576,5.23403114460221,0,0.631719873426831,0,0.245733936501509,0,1.31064823278103,0.263766978228454,0.74259811776028,0.662794751455832,4.03395087871065,0.602694528023977,0.730310090387373,0,0.246242116153576,0.408001382488506,0.313454721478088,0.286235987131057,0.684372125364421,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,1.45398238779565,0.377875943688809,0.242584061187816,1.39457422143411,0.411167888021826,1.23882548358041,5.46615545412086,2.30544635876191,1.18241114944293,1.03423704220986,0,0,1.50593871634084,0.272906150057846,0.224723484445085,2.14258724659632,0,1.27867425159808,3.29851300186716,0.598390972864896,0.426224750532694,0.290209238628584,0.56738522469114,0.622822248995575,5.7787193009051,3.12889751052121,1.08594422352558,1.81619850790011,0,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,0.361439152384566,0,2.75208386025565,0,0,0.0945348171640679,0.443458794925128,0.175669571386252,0.130979075497713,0,0,0,0,0.398873881556595,0,0,0,0.79504962946682,0.860234595106124,0,1.13061588384802,0.838998872419812,2.47606237746061,1.67195973229448,0,0.35576626268671,1.00416183829401,0,0.760272105718513,1.22031028774085,2.20597848207521,0.81014194788176,0.267899184852239,0.22452937262617,0.563057402416611,1.53316637465883,0.949265659568129,2.38162267109529,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,2.0078563452417,1.41867352879343,0.560677600142307,1.06748995729705,0.49333509683432,0,0.538842688278752,0.490385709340376,0,0.576175924479999,0.234321431833797,2.80944069147288,1.1409436430889,4.18456305545043,1.40921398372518,0.971237666208789,1.82586048712923,0.408308342509787,1.96534907698829,1.23990937410919,1.18800285728205,4.69807165629258,0.910161361938026,0,0.168336113954066,1.7516592782075,0.554128230968366,0.877955241761676,3.0648779579902,1.65261864797256,0.567160915800105,0.538168907066586,0,0.847727604638247,2.40072876867522,1.03052529238439,0.515281080091258,0.18611685633159,0.675105328965065,0.68205903612839,0.757301322732344,0.460249493211497,0.646584227275248,1.42003837006646,0.806016785821122,0.508681776931463,0.193260853163297,0.272746120590835,0.286804595389004,0.121973706129595,0,0,0,0,0,4.69348596989448,2.57296375277154,0,4.17931135228781,2.88751792667834,0,0.168584690078102,0.241011029883482,0,0,0,0.269662616320329,0.392442930250692,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.219500570817251,0,0.904760751704678,0.185176890317059,0,1.03993478527958,1.44331342025273,0.115930404975077,0,1.44366447761074,1.38895653772983,0.951270761172991,0,0,1.47730203652438,0,1.48631162288728,0,0,0.141775097242386,0.0895585227028483,0,0.766765358330422,0,0,0.207328115540772,0,0.12624243342638,0.571481048629521,0.763976851116555,1.17217447210047,3.4214489204541,5.44985711327615,0,2.85826432630578,0,0.43596006883328,0.4400297149257,0,0,4.22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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:13367481..13367517,+ | |||
|id=chr12:13367481..13367517,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.73e-15!180;CL:0000057!5.84e-13!75;CL:0002371!1.09e-08!591 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.24e-07,427;CL:0000057,9.23e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!8.34e-10!659;UBERON:0000926!9.36e-10!448;UBERON:0004120!9.36e-10!448;UBERON:0006603!9.36e-10!448;UBERON:0000467!1.32e-09!625;UBERON:0004872!1.85e-09!84;UBERON:0000480!1.92e-09!626;UBERON:0000914!5.82e-09!83;UBERON:0002329!5.82e-09!83;UBERON:0003077!5.82e-09!83;UBERON:0003059!5.82e-09!83;UBERON:0007282!5.82e-09!83;UBERON:0009618!5.82e-09!83;UBERON:0007285!5.82e-09!83;UBERON:0003102!9.03e-08!95;UBERON:0000055!1.17e-07!69;UBERON:0004290!2.13e-07!70;UBERON:0001981!3.76e-07!60;UBERON:0007500!3.76e-07!60;UBERON:0004537!3.76e-07!60;UBERON:0006965!3.76e-07!60;UBERON:0000486!3.94e-07!82;UBERON:0001637!7.98e-07!42;UBERON:0003509!7.98e-07!42;UBERON:0004572!7.98e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;2.27e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.66e-09,167;UBERON:0007524,3.59e-09,73;UBERON:0004923,4.30e-09,66;UBERON:0002329,8.98e-09,71;UBERON:0003059,8.98e-09,71;UBERON:0007282,8.98e-09,71;UBERON:0004290,8.98e-09,71;UBERON:0009618,8.98e-09,71;UBERON:0003077,1.51e-08,72;UBERON:0007285,1.51e-08,72;UBERON:0000926,5.44e-08,315;UBERON:0004120,5.44e-08,315;UBERON:0006603,5.44e-08,315;UBERON:0000486,6.46e-08,83;UBERON:0002067,1.62e-07,9;UBERON:0004016,1.62e-07,9;UBERON:0010083,1.62e-07,9;UBERON:0007503,2.52e-07,78 | |||
|phase1_expression=0.363356758541113,1.2846031433459,0.986680828671798,2.00146596706261,0.893922188854576,5.23403114460221,0,0.631719873426831,0,0.245733936501509,0,1.31064823278103,0.263766978228454,0.74259811776028,0.662794751455832,4.03395087871065,0.602694528023977,0.730310090387373,0,0.246242116153576,0.408001382488506,0.313454721478088,0.286235987131057,0.684372125364421,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,1.45398238779565,0.377875943688809,0.242584061187816,1.39457422143411,0.411167888021826,1.23882548358041,5.46615545412086,2.30544635876191,1.18241114944293,1.03423704220986,0,0,1.50593871634084,0.272906150057846,0.224723484445085,2.14258724659632,0,1.27867425159808,3.29851300186716,0.598390972864896,0.426224750532694,0.290209238628584,0.56738522469114,0.622822248995575,5.7787193009051,3.12889751052121,1.08594422352558,1.81619850790011,0,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,0.361439152384566,0,2.75208386025565,0,0,0.0945348171640679,0.443458794925128,0.175669571386252,0.130979075497713,0,0,0,0,0.398873881556595,0,0,0,0.79504962946682,0.860234595106124,0,1.13061588384802,0.838998872419812,2.47606237746061,1.67195973229448,0,0.35576626268671,1.00416183829401,0,0.760272105718513,1.22031028774085,2.20597848207521,0.81014194788176,0.267899184852239,0.22452937262617,0.563057402416611,1.53316637465883,0.949265659568129,2.38162267109529,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,2.0078563452417,1.41867352879343,0.560677600142307,1.06748995729705,0.49333509683432,0,0.538842688278752,0.490385709340376,0,0.576175924479999,0.234321431833797,2.80944069147288,1.1409436430889,4.18456305545043,1.40921398372518,0.971237666208789,1.82586048712923,0.408308342509787,1.96534907698829,1.23990937410919,1.18800285728205,4.69807165629258,0.910161361938026,0,0.168336113954066,1.7516592782075,0.554128230968366,0.877955241761676,3.0648779579902,1.65261864797256,0.567160915800105,0.538168907066586,0,0.847727604638247,2.40072876867522,1.03052529238439,0.515281080091258,0.18611685633159,0.675105328965065,0.68205903612839,0.757301322732344,0.460249493211497,0.646584227275248,1.42003837006646,0.806016785821122,0.508681776931463,0.193260853163297,0.272746120590835,0.286804595389004,0.121973706129595,0,0,0,0,0,4.69348596989448,2.57296375277154,0,4.17931135228781,2.88751792667834,0,0.168584690078102,0.241011029883482,0,0,0,0.269662616320329,0.392442930250692,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.219500570817251,0,0.904760751704678,0.185176890317059,0,1.03993478527958,1.44331342025273,0.115930404975077,0,1.44366447761074,1.38895653772983,0.951270761172991,0,0,1.47730203652438,0,1.48631162288728,0,0,0.141775097242386,0.0895585227028483,0,0.766765358330422,0,0,0.207328115540772,0,0.12624243342638,0.571481048629521,0.763976851116555,1.17217447210047,3.4214489204541,5.44985711327615,0,2.85826432630578,0,0.43596006883328,0.4400297149257,0,0,4.22651376278,0.797814349754612,0,0.771622122786426,2.83698264046557,0.532844358032199,0.428933980974443,0.542621605391443,0,1.95441710576241,0.355391948742546,1.58390374586686,0,0,0.199945982364114,4.86495122564762,0,2.10833939483032,0,0,0,1.88215698667853,4.10952645100767,0.537182889719687,0,0,0,0,0,0,1.54657762555539,0.335032530668698,4.46557126157214,0,0,0,0.12269149171914,0.500170521059677,1.35632511849868,1.45579603071565,4.10386674233472,1.10391690523754,0.937131319941706,0.902838299183157,2.27407504055985,0,1.32845119707087,0.737476674166813,0.60818530127658,0,0,0,0.215714200818617,0,0.909382714338778,1.66435439510497,1.20956117331872,0.248107807818777,0.153461973288062,0.561320188866147,1.15325234330131,0,0.482561763430822,1.48418066444991,3.70103265126373,1.06537035187876,0.98552587216571,2.07701771673448,1.62694529843943,0,0,0.828728900423067,0.34444334449382,0.728364672026868,0.393373244878272,0,0.308061348417659,0,0,0.105551628892876,0,0.680374821106063,0.431831832204279,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0.386682873168488,2.92692372517824,2.30255512089194,1.51620229732984,0.322260734604821,1.16013355131383,1.10794615640931,0.267096106940212,0,0.192190067365106,0,0.10115778085555,0.929691098594572,1.25924938732256,0,0,0,0,1.29726953372744,0.143124886741991,0.372158369359667,0,0,0,2.1396949401696,0,3.13979456079692,0.179872457583315,0.54907405947211,0.471249609382746,1.01091240786658,0,1.26377536871694,0,2.43713489631284,3.16950440270266,0.136499911407986,0.141405431953713,1.13008116620243,0.551365343546124,1.32687795048244,0.438450885253763,0,3.27947376023316,0,0.92947049429925,1.40847801266121,0,0,0.7133421029625,0,1.89996871767898,3.29294892959902,0,0,0,0.670302275535787,2.17781969722645,0,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,5.34120355637366,0,1.47024129588619,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0.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| |||
|short_description=p@chr12:13367481..13367517,+ | |||
}} |
Revision as of 21:51, 10 September 2013
Short description: | p@chr12:13367481..13367517, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:13367481..13367517, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.24e-07 | 427 |
fibroblast | 9.23e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.66e-09 | 167 |
dense mesenchyme tissue | 3.59e-09 | 73 |
organ component layer | 4.30e-09 | 66 |
somite | 8.98e-09 | 71 |
presomitic mesoderm | 8.98e-09 | 71 |
presumptive segmental plate | 8.98e-09 | 71 |
dermomyotome | 8.98e-09 | 71 |
trunk paraxial mesoderm | 8.98e-09 | 71 |
paraxial mesoderm | 1.51e-08 | 72 |
presumptive paraxial mesoderm | 1.51e-08 | 72 |
mesoderm | 5.44e-08 | 315 |
mesoderm-derived structure | 5.44e-08 | 315 |
presumptive mesoderm | 5.44e-08 | 315 |
multilaminar epithelium | 6.46e-08 | 83 |
dermis | 1.62e-07 | 9 |
dermatome | 1.62e-07 | 9 |
future dermis | 1.62e-07 | 9 |
epithelial vesicle | 2.52e-07 | 78 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.