FFCP PHASE1:Hg19::chr12:103835413..103835445,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=374470|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24729|TSSclassifier=S|UniProt=|association_with_transcript=-40bp_to_ENST00000552977_5end|coexpression_cluster_id=C47|description=CAGE_peak_2_at_C12orf42_5end|id=chr12:103835413..103835445,-|ontology_enrichment_celltype=CL:0000542!6.40e-37!53;CL:0000051!6.40e-37!53;CL:0000838!1.00e-35!52;CL:0000738!9.43e-30!140;CL:0002087!2.18e-28!119;CL:0000037!2.10e-26!172;CL:0000566!2.10e-26!172;CL:0002031!2.06e-25!124;CL:0000988!1.51e-23!182;CL:0002032!2.52e-23!165;CL:0000837!2.52e-23!165;CL:0000791!2.61e-19!18;CL:0000789!2.61e-19!18;CL:0002420!2.61e-19!18;CL:0002419!2.61e-19!18;CL:0000790!2.61e-19!18;CL:0000945!1.03e-18!24;CL:0000826!1.03e-18!24;CL:0000236!8.53e-17!14;CL:0000084!3.43e-15!25;CL:0000827!3.43e-15!25;CL:0000625!8.91e-14!11;CL:0000624!1.17e-08!6|ontology_enrichment_celltype_v019=CL:0000791;3.43e-34;18!CL:0000789;3.43e-34;18!CL:0002419;3.43e-34;18!CL:0000542;4.89e-30;53!CL:0000236;1.31e-27;13!CL:0000625;9.68e-24;11!CL:0000945;1.54e-23;24!CL:0000084;2.91e-23;25!CL:0000624;2.33e-14;6!CL:0002087;5.80e-09;104!CL:0000898;2.90e-08;3!CL:0000226;1.16e-07;3!CL:0000842;1.16e-07;3!CL:0000784;4.35e-07;3!CL:0000623;6.11e-07;3|ontology_enrichment_celltype_v019_2=CL:0000542,3.16e-53,53;CL:0000051,3.16e-53,53;CL:0000838,3.56e-51,52;CL:0000791,4.51e-34,18;CL:0000789,4.51e-34,18;CL:0002420,4.51e-34,18;CL:0002419,4.51e-34,18;CL:0000790,4.51e-34,18;CL:0000236,1.56e-29,14;CL:0002087,1.98e-26,115;CL:0000738,1.50e-25,136;CL:0000625,1.31e-23,11;CL:0000945,1.43e-23,24;CL:0000826,1.43e-23,24;CL:0000084,3.53e-23,25;CL:0000827,3.53e-23,25;CL:0002031,2.56e-19,120;CL:0000037,2.64e-19,168;CL:0000988,1.11e-17,177;CL:0002032,2.50e-15,161;CL:0000837,2.50e-15,161;CL:0000624,2.31e-14,6;CL:0000898,2.90e-08,3;CL:0000226,1.07e-07,3;CL:0000842,1.07e-07,3;CL:0000784,4.35e-07,3;CL:0000623,5.92e-07,3;CL:0000825,5.92e-07,3|ontology_enrichment_development_v019=CL:0000790;3.43e-34;18!CL:0000051;4.89e-30;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.39e-22!115;UBERON:0000178!6.84e-11!15;UBERON:0000179!6.84e-11!15;UBERON:0000463!6.84e-11!15;UBERON:0002390!1.84e-09!102;UBERON:0003061!1.84e-09!102;UBERON:0002193!5.29e-09!112;UBERON:0004177!4.77e-07!7|ontology_enrichment_uberon_v019=UBERON:0000178;2.01e-19;15!UBERON:0000179;2.01e-19;15!UBERON:0000463;2.01e-19;15!UBERON:0002390;4.67e-15;32!UBERON:0004177;1.09e-11;5!UBERON:0005057;1.09e-11;5!UBERON:0002193;1.52e-10;42!UBERON:0002106;5.54e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.96e-19,15;UBERON:0000179,1.96e-19,15;UBERON:0000463,1.96e-19,15;UBERON:0004177,7.39e-12,7;UBERON:0005057,7.39e-12,7;UBERON:0002106,5.67e-08,3;UBERON:0004854,5.67e-08,3;UBERON:0009034,5.67e-08,3;UBERON:0002095,5.67e-08,3;UBERON:0004782,5.67e-08,3;UBERON:0003281,5.67e-08,3;UBERON:0009664,5.67e-08,3;UBERON:0002296,5.67e-08,3;UBERON:0005602,5.67e-08,3;UBERON:0001179,5.67e-08,3;UBERON:0006293,5.67e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52164238968239,3.69452652524756,3.30585281517453,0,1.15148819429164,0.309632246632152,0,0,0,0,0,0,0,0.401088894940283,0.868043482863407,0,0.647787332037959,0,0,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0,0.272906150057846,0.224723484445085,0,0.641858054152187,0,0,0,0,0,0.56738522469114,0,0,1.0429658368404,0,1.21079900526674,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0.570025487482497,0.39783335439818,0.365328307529268,15.839662001519,20.753267227961,35.5803701545422,17.4959391252268,20.0197993518006,24.1396024780883,25.1197051658248,24.8053976179195,29.0298614245819,23.4894875748376,21.0250275468876,0,1.68152568894461,0,5.90129310341499,5.50215067848831,3.08402248499264,2.17342444007882,10.4295125322749,14.6768819777767,17.534405556712,1.11410456885174,5.30290633454707,7.3106185212595,5.95768500283034,0.384273959177026,0.520237390239513,5.59088875652499,9.67225062250469,5.506258628966,11.1214922371545,12.0393372640371,6.27213142829861,1.58633079776593,6.89796888483458,8.93431358254838,10.8798467568386,5.09704662918555,4.55758417699493,4.75226022224187,2.55977702432214,4.73550461271348,4.99722906209383,4.49876778883632,4.92676798152628,6.04820229674197,2.13952156626806,6.22744936696036,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.348259474598534,0.132957960518865,1.19245312152671,1.71598473234038,5.20040501861391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1673383622212,1.72502059887614,2.31017465303547,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=374470 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24729 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-40bp_to_ENST00000552977_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_2_at_C12orf42_5end | |||
|id=chr12:103835413..103835445,- | |||
|ontology_enrichment_celltype=CL:0000542!6.40e-37!53;CL:0000051!6.40e-37!53;CL:0000838!1.00e-35!52;CL:0000738!9.43e-30!140;CL:0002087!2.18e-28!119;CL:0000037!2.10e-26!172;CL:0000566!2.10e-26!172;CL:0002031!2.06e-25!124;CL:0000988!1.51e-23!182;CL:0002032!2.52e-23!165;CL:0000837!2.52e-23!165;CL:0000791!2.61e-19!18;CL:0000789!2.61e-19!18;CL:0002420!2.61e-19!18;CL:0002419!2.61e-19!18;CL:0000790!2.61e-19!18;CL:0000945!1.03e-18!24;CL:0000826!1.03e-18!24;CL:0000236!8.53e-17!14;CL:0000084!3.43e-15!25;CL:0000827!3.43e-15!25;CL:0000625!8.91e-14!11;CL:0000624!1.17e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.43e-34;18!CL:0000789;3.43e-34;18!CL:0002419;3.43e-34;18!CL:0000542;4.89e-30;53!CL:0000236;1.31e-27;13!CL:0000625;9.68e-24;11!CL:0000945;1.54e-23;24!CL:0000084;2.91e-23;25!CL:0000624;2.33e-14;6!CL:0002087;5.80e-09;104!CL:0000898;2.90e-08;3!CL:0000226;1.16e-07;3!CL:0000842;1.16e-07;3!CL:0000784;4.35e-07;3!CL:0000623;6.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.16e-53,53;CL:0000051,3.16e-53,53;CL:0000838,3.56e-51,52;CL:0000791,4.51e-34,18;CL:0000789,4.51e-34,18;CL:0002420,4.51e-34,18;CL:0002419,4.51e-34,18;CL:0000790,4.51e-34,18;CL:0000236,1.56e-29,14;CL:0002087,1.98e-26,115;CL:0000738,1.50e-25,136;CL:0000625,1.31e-23,11;CL:0000945,1.43e-23,24;CL:0000826,1.43e-23,24;CL:0000084,3.53e-23,25;CL:0000827,3.53e-23,25;CL:0002031,2.56e-19,120;CL:0000037,2.64e-19,168;CL:0000988,1.11e-17,177;CL:0002032,2.50e-15,161;CL:0000837,2.50e-15,161;CL:0000624,2.31e-14,6;CL:0000898,2.90e-08,3;CL:0000226,1.07e-07,3;CL:0000842,1.07e-07,3;CL:0000784,4.35e-07,3;CL:0000623,5.92e-07,3;CL:0000825,5.92e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.43e-34;18!CL:0000051;4.89e-30;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.39e-22!115;UBERON:0000178!6.84e-11!15;UBERON:0000179!6.84e-11!15;UBERON:0000463!6.84e-11!15;UBERON:0002390!1.84e-09!102;UBERON:0003061!1.84e-09!102;UBERON:0002193!5.29e-09!112;UBERON:0004177!4.77e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.01e-19;15!UBERON:0000179;2.01e-19;15!UBERON:0000463;2.01e-19;15!UBERON:0002390;4.67e-15;32!UBERON:0004177;1.09e-11;5!UBERON:0005057;1.09e-11;5!UBERON:0002193;1.52e-10;42!UBERON:0002106;5.54e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.96e-19,15;UBERON:0000179,1.96e-19,15;UBERON:0000463,1.96e-19,15;UBERON:0004177,7.39e-12,7;UBERON:0005057,7.39e-12,7;UBERON:0002106,5.67e-08,3;UBERON:0004854,5.67e-08,3;UBERON:0009034,5.67e-08,3;UBERON:0002095,5.67e-08,3;UBERON:0004782,5.67e-08,3;UBERON:0003281,5.67e-08,3;UBERON:0009664,5.67e-08,3;UBERON:0002296,5.67e-08,3;UBERON:0005602,5.67e-08,3;UBERON:0001179,5.67e-08,3;UBERON:0006293,5.67e-08,3 | |||
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|short_description=p2@C12orf42 | |||
}} |
Revision as of 20:31, 10 September 2013
Short description: | p2@C12orf42 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_C12orf42_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -40bp_to_ENST00000552977_5end |
EntrezGene: | C12orf42 |
HGNC: | 24729 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.16e-53 | 53 |
common lymphoid progenitor | 3.16e-53 | 53 |
lymphoid lineage restricted progenitor cell | 3.56e-51 | 52 |
mature alpha-beta T cell | 4.51e-34 | 18 |
alpha-beta T cell | 4.51e-34 | 18 |
immature T cell | 4.51e-34 | 18 |
mature T cell | 4.51e-34 | 18 |
immature alpha-beta T cell | 4.51e-34 | 18 |
B cell | 1.56e-29 | 14 |
nongranular leukocyte | 1.98e-26 | 115 |
leukocyte | 1.50e-25 | 136 |
CD8-positive, alpha-beta T cell | 1.31e-23 | 11 |
lymphocyte of B lineage | 1.43e-23 | 24 |
pro-B cell | 1.43e-23 | 24 |
T cell | 3.53e-23 | 25 |
pro-T cell | 3.53e-23 | 25 |
hematopoietic lineage restricted progenitor cell | 2.56e-19 | 120 |
hematopoietic stem cell | 2.64e-19 | 168 |
hematopoietic cell | 1.11e-17 | 177 |
hematopoietic oligopotent progenitor cell | 2.50e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.50e-15 | 161 |
CD4-positive, alpha-beta T cell | 2.31e-14 | 6 |
naive T cell | 2.90e-08 | 3 |
single nucleate cell | 1.07e-07 | 3 |
mononuclear cell | 1.07e-07 | 3 |
plasmacytoid dendritic cell | 4.35e-07 | 3 |
natural killer cell | 5.92e-07 | 3 |
pro-NK cell | 5.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.96e-19 | 15 |
haemolymphatic fluid | 1.96e-19 | 15 |
organism substance | 1.96e-19 | 15 |
hemopoietic organ | 7.39e-12 | 7 |
immune organ | 7.39e-12 | 7 |
spleen | 5.67e-08 | 3 |
gastrointestinal system mesentery | 5.67e-08 | 3 |
stomach region | 5.67e-08 | 3 |
mesentery | 5.67e-08 | 3 |
gastrointestinal system serosa | 5.67e-08 | 3 |
mesentery of stomach | 5.67e-08 | 3 |
gut mesentery | 5.67e-08 | 3 |
dorsal mesentery | 5.67e-08 | 3 |
dorsal mesogastrium | 5.67e-08 | 3 |
peritoneal cavity | 5.67e-08 | 3 |
spleen primordium | 5.67e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.