FFCP PHASE1:Hg19::chr11:93517516..93517533,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9440|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2375|TSSclassifier=S|UniProt=E9PKQ4|association_with_transcript=0bp_to_ENST00000533359_5end|description=CAGE_peak_3_at_MED17_5end|id=chr11:93517516..93517533,+|ontology_enrichment_celltype=CL:0002319!7.40e-12!25;CL:0002321!1.29e-10!248;CL:0000133!1.64e-10!59;CL:0000220!5.23e-10!246;CL:0002139!4.11e-09!24;CL:0000221!5.89e-09!71;CL:0000333!9.40e-09!41;CL:0000095!4.32e-07!17;CL:0000123!4.32e-07!17;CL:0000071!9.73e-07!18;CL:0002546!9.73e-07!18|ontology_enrichment_celltype_v019=CL:0002319;3.57e-13;25!CL:0002139;5.19e-10;24!CL:0000095;1.07e-07;17!CL:0000071;3.25e-07;18!CL:0000115;3.69e-07;36|ontology_enrichment_celltype_v019_2=CL:0002319,2.68e-13,25;CL:0000133,4.19e-12,59;CL:0002321,2.11e-11,250;CL:0000333,5.72e-10,41;CL:0002139,8.51e-10,24;CL:0000221,2.26e-09,72;CL:0000095,6.17e-08,17;CL:0000123,6.17e-08,17;CL:0000047,2.68e-07,8;CL:0000071,3.78e-07,18;CL:0002546,3.78e-07,18;CL:0000115,3.83e-07,36;CL:0000066,8.30e-07,253|ontology_enrichment_development_v019=CL:0002546;3.25e-07;18!CL:0000133;5.27e-07;59|ontology_enrichment_disease=DOID:14566!9.85e-07!239|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!9.73e-07!18;UBERON:0004638!9.73e-07!18;UBERON:0004852!9.73e-07!18|ontology_enrichment_uberon_v019=UBERON:0004638;3.25e-07;18!UBERON:0001986;3.25e-07;18!UBERON:0004852;3.25e-07;18|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.78e-07,18;UBERON:0001986,3.78e-07,18;UBERON:0004852,3.78e-07,18|phase1_expression=0.726713517082227,0.856402095563933,0.563817616383885,0,1.34088328328186,0,0,0,0.522371256399677,0.982935746006035,2.09340350391728,1.74753097704138,0.791300934685361,0.990130823680373,0.994192127183747,2.01697543935533,4.21886169616784,3.65155045193687,1.46379839637152,2.95490539384291,1.42800483870977,0.313454721478088,6.5834277040143,6.02247470320691,4.77062030460251,0.840547463227464,2.13461532569859,1.65292640758726,0.393364276848904,0.767658796194425,0.928896739896456,0,1.8072355126695,0,2.32401601740905,2.13253848731132,3.22960483268332,0.553995408531877,0.802177789880567,0.868043482863407,0.447830948479849,1.29557466407592,0.257575567634187,0.436194716338694,0.377875943688809,0.970336244751265,0.697287110717054,1.23350366406548,0,0.28769239232215,1.2808035326455,0.709446689665756,0,1.93645405075148,0,0.564727018627814,0,0.449446968890169,0.306083892370903,0.641858054152187,1.27867425159808,0.989553900560148,0.797854630486527,0.426224750532694,1.16083695451434,0.56738522469114,0.622822248995575,0.75374599577023,1.5644487552606,0.65156653411535,0,1.47311054395026,0.316462387440884,0.211255286311942,0.425208599930087,0.419317291016752,0.786300418025466,0.150176892841506,0.32145117339416,0,0,0.182664153764634,0,0,0,2.13365111283254,0,0.574752439954483,0.661044872784862,0,0.569212969109448,0.587237189370939,1.91136614062614,5.28685314316103,3.36305137788922,1.58030450865046,2.75393678159366,1.96505381374582,2.67281948699362,0,0.651844533267181,0.946895611469467,0,0.779873198196215,0.883817722424512,0.443067789167242,1.08321545506006,0.640456598628376,0.260118695119756,0.328875809207352,0.276350017785848,0.579606171470105,1.03800594213442,1.87278579662799,2.09071047609954,0.793165398882963,0.766440987203842,1.37450978193052,1.26509846009751,0.318565414324097,0,0.950452044448374,1.05402583354441,0.511946444617674,2.49861453104692,0.473554504088034,0,2.82249440514625,2.94184215361858,3.04131248153878,0,2.01210257911091,1.15076305659177,0,3.00802746381534,1.44846518960824,3.9764297352555,1.45990461090791,4.53767122387526,2.21729397462564,2.63504357079378,0.851363990735132,0.364295288292542,0.370784442784429,0.649094787309367,0.522389211897802,0.26591592103773,1.43094374583205,1.14398982156026,1.85728750664782,3.37896092523399,4.30117297553062,2.42998351125316,3.39184765154406,2.93649605346934,1.37559020970034,2.08994966536811,2.84258435086262,4.26919515224052,4.68608857870538,3.22263453687318,0.760272105718513,3.41686880567437,2.57364156242108,4.86085168729056,2.14319347881791,1.12264686313085,1.68917220724983,4.5994991239765,3.79706263827252,3.29763139074733,1.31780417436063,0,0.436094052142534,0,1.13967460498122,1.98613771219828,3.15520282823695,0.709336764396714,1.68203280042692,3.20246987189115,2.22000793575444,0.622422070799533,2.02066008104532,2.12500474047496,1.05950199351452,2.88087962239999,0.937285727335186,0.312160076830321,0,0.597794722207204,0.822041490506354,0.971237666208789,0.842704840213491,0.816616685019573,1.10550885580591,0.516628905878827,1.18800285728205,0.741800787835671,0,0,1.85169725349473,1.12606667884768,0.554128230968366,1.31693286264251,0.30648779579902,0.45071417671979,1.58805056424029,2.51145489964407,1.06778694409284,0.423863802319124,3.60109315301283,0.92747276314595,1.54584324027377,0.558350568994769,2.36286865137773,1.85130309806277,3.02920529092937,0.828449087780694,1.45481451136931,2.84007674013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8,4.58915402247521,1.26698501011437,4.79347499787314,1.87052183685892,1.92979289023174,1.50424523575425,2.42491834298366,2.94760543171796,1.65833887891756,0.930896962757057,0.639701945702943,1.42838658878244,4.90875714753646,3.04166100049704,1.56984607612859,0.572824424503484,0.404234377916439,0.870866991587845,0.684466602170562,1.21233695426258,1.29099969706817,0.665320713092027,9.11716608442914,0.213454691755431,0,1.07790242527904,0,1.95586310692586,1.22068853494722,1.99727032255654,0.805095174364105,1.9234109538194|short_description=p3@MED17}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9440 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2375 | |||
|TSSclassifier=S | |||
|UniProt=E9PKQ4 | |||
|association_with_transcript=0bp_to_ENST00000533359_5end | |||
|description=CAGE_peak_3_at_MED17_5end | |||
|id=chr11:93517516..93517533,+ | |||
|ontology_enrichment_celltype=CL:0002319!7.40e-12!25;CL:0002321!1.29e-10!248;CL:0000133!1.64e-10!59;CL:0000220!5.23e-10!246;CL:0002139!4.11e-09!24;CL:0000221!5.89e-09!71;CL:0000333!9.40e-09!41;CL:0000095!4.32e-07!17;CL:0000123!4.32e-07!17;CL:0000071!9.73e-07!18;CL:0002546!9.73e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002319;3.57e-13;25!CL:0002139;5.19e-10;24!CL:0000095;1.07e-07;17!CL:0000071;3.25e-07;18!CL:0000115;3.69e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.68e-13,25;CL:0000133,4.19e-12,59;CL:0002321,2.11e-11,250;CL:0000333,5.72e-10,41;CL:0002139,8.51e-10,24;CL:0000221,2.26e-09,72;CL:0000095,6.17e-08,17;CL:0000123,6.17e-08,17;CL:0000047,2.68e-07,8;CL:0000071,3.78e-07,18;CL:0002546,3.78e-07,18;CL:0000115,3.83e-07,36;CL:0000066,8.30e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002546;3.25e-07;18!CL:0000133;5.27e-07;59 | |||
|ontology_enrichment_disease=DOID:14566!9.85e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!9.73e-07!18;UBERON:0004638!9.73e-07!18;UBERON:0004852!9.73e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.25e-07;18!UBERON:0001986;3.25e-07;18!UBERON:0004852;3.25e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.78e-07,18;UBERON:0001986,3.78e-07,18;UBERON:0004852,3.78e-07,18 | |||
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| |||
|short_description=p3@MED17 | |||
}} |
Revision as of 20:12, 10 September 2013
Short description: | p3@MED17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_MED17_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000533359_5end |
EntrezGene: | MED17 |
HGNC: | 2375 |
UniProt: | E9PKQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.68e-13 | 25 |
neurectodermal cell | 4.19e-12 | 59 |
embryonic cell | 2.11e-11 | 250 |
migratory neural crest cell | 5.72e-10 | 41 |
endothelial cell of vascular tree | 8.51e-10 | 24 |
ectodermal cell | 2.26e-09 | 72 |
neuron associated cell | 6.17e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 6.17e-08 | 17 |
neuronal stem cell | 2.68e-07 | 8 |
blood vessel endothelial cell | 3.78e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.78e-07 | 18 |
endothelial cell | 3.83e-07 | 36 |
epithelial cell | 8.30e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 3.78e-07 | 18 |
endothelium | 3.78e-07 | 18 |
cardiovascular system endothelium | 3.78e-07 | 18 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.