FFCP PHASE1:Hg19::chr11:69590101..69590112,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2249|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3682|TSSclassifier=S|UniProt=P08620|association_with_transcript=58bp_to_ENST00000168712,NM_002007,uc001opg.1,uc010rqj.1_5end|coexpression_cluster_id=C128|description=CAGE_peak_1_at_FGF4_5end|id=chr11:69590101..69590112,-|ontology_enrichment_celltype=CL:0002322!1.31e-32!5;CL:0000039!1.60e-15!7;CL:0000586!1.60e-15!7;CL:0000540!3.38e-10!6;CL:0000031!3.38e-10!6;CL:0000404!3.38e-10!6;CL:0000047!9.25e-08!8|ontology_enrichment_celltype_v019=CL:0002322;1.50e-55;5!CL:0000039;2.41e-26;7!CL:0000586;2.41e-26;7!CL:0002321;1.43e-18;15!CL:0000540;5.30e-17;6!CL:0000404;5.30e-17;6!CL:0000148;1.13e-10;10!CL:0000147;9.03e-08;14|ontology_enrichment_celltype_v019_2=CL:0002322,1.58e-55,5;CL:0000039,2.41e-26,7;CL:0000586,2.41e-26,7;CL:0000540,5.16e-17,6;CL:0000031,5.16e-17,6;CL:0000404,5.16e-17,6;CL:0000047,6.46e-13,8;CL:0000148,1.13e-10,10;CL:0000541,1.13e-10,10;CL:0000147,9.03e-08,14|ontology_enrichment_development_v019=UBERON:0009117;1.54e-18;10!UBERON:0005564;1.54e-18;10!CL:0000031;5.30e-17;6|ontology_enrichment_disease=DOID:3095!3.35e-10!22;DOID:2994!3.35e-10!22;DOID:0050619!1.07e-07!1;DOID:1357!1.07e-07!1;DOID:0060085!1.91e-07!1;DOID:3165!1.91e-07!1;DOID:0060121!1.91e-07!1;DOID:2438!1.91e-07!1;DOID:4418!1.91e-07!1;DOID:5409!3.49e-07!4|ontology_enrichment_disease_v019=DOID:3095;7.95e-13;22!DOID:2994;7.95e-13;22!DOID:0050619;3.08e-12;1!DOID:1357;3.08e-12;1|ontology_enrichment_disease_v019_2=DOID:3095,7.95e-13,22;DOID:2994,7.95e-13,22;DOID:0050619,3.45e-12,1;DOID:1357,3.45e-12,1|ontology_enrichment_uberon=UBERON:0000473!2.78e-20!8;UBERON:0003135!1.06e-14!11;UBERON:0002240!3.69e-09!3;UBERON:0001764!1.07e-07!1;UBERON:0001825!1.07e-07!1;UBERON:0000991!1.40e-07!21;UBERON:0009196!1.40e-07!21;UBERON:0009117!1.40e-07!21;UBERON:0005564!1.40e-07!21;UBERON:0002038!1.58e-07!1;UBERON:0009661!1.58e-07!1;UBERON:0002298!2.20e-07!8;UBERON:0004176!3.18e-07!22;UBERON:0003101!3.18e-07!22;UBERON:0000079!3.18e-07!22|ontology_enrichment_uberon_v019=UBERON:0000473;4.28e-23;8!UBERON:0003135;7.01e-17;11!UBERON:0000922;9.11e-13;49!UBERON:0001764;3.08e-12;1!UBERON:0001825;3.08e-12;1!UBERON:0000991;6.04e-09;21!UBERON:0003101;1.51e-08;22!UBERON:0000079;1.51e-08;22|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.28e-23,8;UBERON:0003135,7.01e-17,11;UBERON:0001764,3.45e-12,1;UBERON:0001825,3.45e-12,1;UBERON:0000991,6.04e-09,21;UBERON:0009196,6.04e-09,21;UBERON:0009117,6.04e-09,21;UBERON:0005564,6.04e-09,21;UBERON:0004176,1.51e-08,22;UBERON:0003101,1.51e-08,22;UBERON:0000079,1.51e-08,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0521085071801,14.3132149787204,20.2177460592962,14.823530867198,15.1392510525377,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5317405220781,0,0,0,15.9145616980369,1.78801267576404,3.32352270423348,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.29813602125492,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4794432940146,0,0,0,0.475680363110274,1.24240690242856,0,0,0.154348316215889,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,11.1450883402969,0,47.0168505110536,60.1239161847511,28.2117341571974,51.3950455549369,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@FGF4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2249 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3682 | |||
|TSSclassifier=S | |||
|UniProt=P08620 | |||
|association_with_transcript=58bp_to_ENST00000168712,NM_002007,uc001opg.1,uc010rqj.1_5end | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_1_at_FGF4_5end | |||
|id=chr11:69590101..69590112,- | |||
|ontology_enrichment_celltype=CL:0002322!1.31e-32!5;CL:0000039!1.60e-15!7;CL:0000586!1.60e-15!7;CL:0000540!3.38e-10!6;CL:0000031!3.38e-10!6;CL:0000404!3.38e-10!6;CL:0000047!9.25e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.50e-55;5!CL:0000039;2.41e-26;7!CL:0000586;2.41e-26;7!CL:0002321;1.43e-18;15!CL:0000540;5.30e-17;6!CL:0000404;5.30e-17;6!CL:0000148;1.13e-10;10!CL:0000147;9.03e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.58e-55,5;CL:0000039,2.41e-26,7;CL:0000586,2.41e-26,7;CL:0000540,5.16e-17,6;CL:0000031,5.16e-17,6;CL:0000404,5.16e-17,6;CL:0000047,6.46e-13,8;CL:0000148,1.13e-10,10;CL:0000541,1.13e-10,10;CL:0000147,9.03e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.54e-18;10!UBERON:0005564;1.54e-18;10!CL:0000031;5.30e-17;6 | |||
|ontology_enrichment_disease=DOID:3095!3.35e-10!22;DOID:2994!3.35e-10!22;DOID:0050619!1.07e-07!1;DOID:1357!1.07e-07!1;DOID:0060085!1.91e-07!1;DOID:3165!1.91e-07!1;DOID:0060121!1.91e-07!1;DOID:2438!1.91e-07!1;DOID:4418!1.91e-07!1;DOID:5409!3.49e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:3095;7.95e-13;22!DOID:2994;7.95e-13;22!DOID:0050619;3.08e-12;1!DOID:1357;3.08e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.95e-13,22;DOID:2994,7.95e-13,22;DOID:0050619,3.45e-12,1;DOID:1357,3.45e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.78e-20!8;UBERON:0003135!1.06e-14!11;UBERON:0002240!3.69e-09!3;UBERON:0001764!1.07e-07!1;UBERON:0001825!1.07e-07!1;UBERON:0000991!1.40e-07!21;UBERON:0009196!1.40e-07!21;UBERON:0009117!1.40e-07!21;UBERON:0005564!1.40e-07!21;UBERON:0002038!1.58e-07!1;UBERON:0009661!1.58e-07!1;UBERON:0002298!2.20e-07!8;UBERON:0004176!3.18e-07!22;UBERON:0003101!3.18e-07!22;UBERON:0000079!3.18e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.28e-23;8!UBERON:0003135;7.01e-17;11!UBERON:0000922;9.11e-13;49!UBERON:0001764;3.08e-12;1!UBERON:0001825;3.08e-12;1!UBERON:0000991;6.04e-09;21!UBERON:0003101;1.51e-08;22!UBERON:0000079;1.51e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.28e-23,8;UBERON:0003135,7.01e-17,11;UBERON:0001764,3.45e-12,1;UBERON:0001825,3.45e-12,1;UBERON:0000991,6.04e-09,21;UBERON:0009196,6.04e-09,21;UBERON:0009117,6.04e-09,21;UBERON:0005564,6.04e-09,21;UBERON:0004176,1.51e-08,22;UBERON:0003101,1.51e-08,22;UBERON:0000079,1.51e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0521085071801,14.3132149787204,20.2177460592962,14.823530867198,15.1392510525377,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5317405220781,0,0,0,15.9145616980369,1.78801267576404,3.32352270423348,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.29813602125492,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4794432940146,0,0,0,0.475680363110274,1.24240690242856,0,0,0.154348316215889,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,11.1450883402969,0,47.0168505110536,60.1239161847511,28.2117341571974,51.3950455549369,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@FGF4 | |||
}} |
Revision as of 19:24, 10 September 2013
Short description: | p1@FGF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_FGF4_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 58bp_to_ENST00000168712, NM_002007, uc001opg.1, uc010rqj.1_5end |
EntrezGene: | FGF4 |
HGNC: | 3682 |
UniProt: | P08620 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.58e-55 | 5 |
germ line cell | 2.41e-26 | 7 |
germ cell | 2.41e-26 | 7 |
neuron | 5.16e-17 | 6 |
neuroblast | 5.16e-17 | 6 |
electrically signaling cell | 5.16e-17 | 6 |
neuronal stem cell | 6.46e-13 | 8 |
melanocyte | 1.13e-10 | 10 |
melanoblast | 1.13e-10 | 10 |
pigment cell | 9.03e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 4.28e-23 | 8 |
male reproductive organ | 7.01e-17 | 11 |
maxillary sinus | 3.45e-12 | 1 |
paranasal sinus | 3.45e-12 | 1 |
gonad | 6.04e-09 | 21 |
indifferent external genitalia | 6.04e-09 | 21 |
indifferent gonad | 6.04e-09 | 21 |
gonad primordium | 6.04e-09 | 21 |
external genitalia | 1.51e-08 | 22 |
male organism | 1.51e-08 | 22 |
male reproductive system | 1.51e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.95e-13 | 22 |
germ cell cancer | 7.95e-13 | 22 |
paranasal sinus cancer | 3.45e-12 | 1 |
maxillary sinus cancer | 3.45e-12 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.