FFCP PHASE1:Hg19::chr11:6340354..6340378,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3179|description=CAGE_peak_at_chr11:6340354..6340378,+|id=chr11:6340354..6340378,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002615;1.62e-12;3|ontology_enrichment_celltype_v019_2=CL:0002615,1.76e-12,3|ontology_enrichment_development_v019=UBERON:0006603;1.29e-08;65|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;1.36e-08;2|ontology_enrichment_disease_v019_2=DOID:114,8.50e-09,2|ontology_enrichment_uberon=UBERON:0007023!1.21e-19!115;UBERON:0000468!5.02e-09!659;UBERON:0007100!4.21e-07!27;UBERON:0004457!6.53e-07!12;UBERON:0000042!6.53e-07!12;UBERON:0003688!8.00e-07!6;UBERON:0002358!8.00e-07!6;UBERON:0003684!8.00e-07!6;UBERON:0001178!8.00e-07!6|ontology_enrichment_uberon_v019=UBERON:0007100;2.34e-11;25!UBERON:0000160;5.44e-10;17!UBERON:0005409;6.44e-10;22!UBERON:0005904;1.68e-09;4!UBERON:0003135;7.12e-09;11!UBERON:0002108;1.34e-07;4!UBERON:0004921;1.44e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.52e-17,114;UBERON:0007100,5.94e-13,27;UBERON:0000160,5.37e-10,17;UBERON:0005904,2.25e-09,4;UBERON:0003135,8.83e-09,11;UBERON:0005409,1.21e-08,25;UBERON:0002108,1.83e-07,4;UBERON:0000948,2.59e-07,24;UBERON:0005498,2.59e-07,24;UBERON:0004140,2.59e-07,24;UBERON:0009881,2.59e-07,24;UBERON:0004141,2.59e-07,24;UBERON:0003084,2.59e-07,24;UBERON:0007005,2.59e-07,24;UBERON:0004139,2.59e-07,24;UBERON:0004291,2.59e-07,24;UBERON:0003103,3.74e-07,68|phase1_expression=0.908391896352783,0.642301571672949,1.69145284915165,3.00219895059391,1.34088328328186,2.61701557230111,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0,0.221729397462564,0.175669571386252,0.851363990735132,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0,0.794455084879313,0.286836620748814,0,0,2.1349799145941,0,0,0.134710672069688,0.163461903113459,0.302714855289863,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0.300476117813194,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0.206105058476878,0.772921620136887,0.18611685633159,0.506328996723799,0.292311015483596,1.26216887122057,0,0.161646056818812,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0.121973706129595,0.662648841607426,0,0.518305275076852,0.252320850875628,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0,0.220587945464788,0.435758888184812,0.474541238222193,0.269662616320329,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.469634776943287,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,1.91699884393266,2.29723871668228,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.630809660135739,0.468565659970853,0.601892199455438,0,0,0,0.737476674166813,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,1.07423381301644,0.841980283299221,0.768834895534206,0.511707249066704,0.482561763430822,0,0,0,0,0,0,0,0,0,0.114814448164607,0.364182336013434,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,4.62681758070868,0,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,0.412164046590889,0,0,0,0,1.6068392984416,0.290012154876366,0.308097234229289,0,0.137836572484531,0,0,0.255679882248303,0.267096106940212,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0.424216295861138,1.13008116620243,0,0,0.438450885253763,0.578775534266688,0,0.405820753925408,0.6196469961995,0,0,0,0.35667105148125,0,0.422215270595328,0.329294892959902,0,0.349934720244983,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0.23874448473769,0,0,0,1.1253553312841,0,0,0,6.97367958878744,0.828851746593443,0,0,0,0.311039587661807,0,0,0,2.95930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,1.84680620409113,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,2.56526937059684,1.83309043480088,1.18608451472249,0.123563938946503,0.208843899010911,0.067401132980677,0,0,0,0,0,3.15667522279512,4.83962864194656,0,0.568679216656392,0,0,0,0,0.313932918407225,0,0,0,0,0,0,1.04836000945218,0.171986032471617,0,0,0,2.61870344518732,0,0.451961481561065,0,0,0.0633107959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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3179 | |||
|description=CAGE_peak_at_chr11:6340354..6340378,+ | |||
|id=chr11:6340354..6340378,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002615;1.62e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.76e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.29e-08;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.36e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.50e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.21e-19!115;UBERON:0000468!5.02e-09!659;UBERON:0007100!4.21e-07!27;UBERON:0004457!6.53e-07!12;UBERON:0000042!6.53e-07!12;UBERON:0003688!8.00e-07!6;UBERON:0002358!8.00e-07!6;UBERON:0003684!8.00e-07!6;UBERON:0001178!8.00e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.34e-11;25!UBERON:0000160;5.44e-10;17!UBERON:0005409;6.44e-10;22!UBERON:0005904;1.68e-09;4!UBERON:0003135;7.12e-09;11!UBERON:0002108;1.34e-07;4!UBERON:0004921;1.44e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.52e-17,114;UBERON:0007100,5.94e-13,27;UBERON:0000160,5.37e-10,17;UBERON:0005904,2.25e-09,4;UBERON:0003135,8.83e-09,11;UBERON:0005409,1.21e-08,25;UBERON:0002108,1.83e-07,4;UBERON:0000948,2.59e-07,24;UBERON:0005498,2.59e-07,24;UBERON:0004140,2.59e-07,24;UBERON:0009881,2.59e-07,24;UBERON:0004141,2.59e-07,24;UBERON:0003084,2.59e-07,24;UBERON:0007005,2.59e-07,24;UBERON:0004139,2.59e-07,24;UBERON:0004291,2.59e-07,24;UBERON:0003103,3.74e-07,68 | |||
|phase1_expression=0.908391896352783,0.642301571672949,1.69145284915165,3.00219895059391,1.34088328328186,2.61701557230111,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0,0.221729397462564,0.175669571386252,0.851363990735132,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0,0.794455084879313,0.286836620748814,0,0,2.1349799145941,0,0,0.134710672069688,0.163461903113459,0.302714855289863,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0.300476117813194,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0.206105058476878,0.772921620136887,0.18611685633159,0.506328996723799,0.292311015483596,1.26216887122057,0,0.161646056818812,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0.121973706129595,0.662648841607426,0,0.518305275076852,0.252320850875628,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0,0.220587945464788,0.435758888184812,0.474541238222193,0.269662616320329,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.469634776943287,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,1.91699884393266,2.29723871668228,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.630809660135739,0.468565659970853,0.601892199455438,0,0,0,0.737476674166813,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,1.07423381301644,0.841980283299221,0.768834895534206,0.511707249066704,0.482561763430822,0,0,0,0,0,0,0,0,0,0.114814448164607,0.364182336013434,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,4.62681758070868,0,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,0.412164046590889,0,0,0,0,1.6068392984416,0.290012154876366,0.308097234229289,0,0.137836572484531,0,0,0.255679882248303,0.267096106940212,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0.424216295861138,1.13008116620243,0,0,0.438450885253763,0.578775534266688,0,0.405820753925408,0.6196469961995,0,0,0,0.35667105148125,0,0.422215270595328,0.329294892959902,0,0.349934720244983,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0.23874448473769,0,0,0,1.1253553312841,0,0,0,6.97367958878744,0.828851746593443,0,0,0,0.311039587661807,0,0,0,2.95930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,1.84680620409113,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,2.56526937059684,1.83309043480088,1.18608451472249,0.123563938946503,0.208843899010911,0.067401132980677,0,0,0,0,0,3.15667522279512,4.83962864194656,0,0.568679216656392,0,0,0,0,0.313932918407225,0,0,0,0,0,0,1.04836000945218,0.171986032471617,0,0,0,2.61870344518732,0,0.451961481561065,0,0,0.0633107959558787,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,1.95497680890578,4.35404805622199,0.717873024576814,1.79711100449092,1.71690419254628,2.67805748930247,7.18863155607971,0,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0.137539436597234,0,0,0,0.182248669974074,0,0.236417121897595,0.157363764404994,0,0,0,1.42939065274673,1.98627591109629,0,0,0,0,0,0,0.511164065356265,0.113312091520126,0,0,0,0,0,0,0.320362237703084,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0.332787154610557,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0.302461847526478,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0,1.03018711554838,0.673498977531838,0,0,0,0.260994291965212,0.226705925512272,0,0,0,0,0,0,0,0.168942440653073,0,0.690860683462397,0,0.414775308455192,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0,0.192687675289379,0,0.478901577171454,0.205116364240755,0,0.207471757392654,0.322951291263702,1.42769420259154,0,0,0,0,0,0,1.39241355481392,1.88025820873143,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0,3.47347824872506,0,0,0,0,0,0,0.266107110487916,0,0,0.0679697329768317,0.0657727735628491,0,0,3.61068227112365,0,0,3.65263488203798,0,0,0.643288897589907,0,0,0,0,0,0,0,0.860454717640555,0.236664001461131,0.170426809518315,0.846774100381858,0,0,0,0,0,0,0,0.410651227424988,2.3196288626764,0.485710993059139,0,0,0,0,0,0,1.08043821351123,1.5299169235277,0,7.35444965261716,0,0,0.297046400327086,0.4226557275834,0.849635573439084,0.469919589899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| |||
|short_description=p@chr11:6340354..6340378,+ | |||
}} |
Revision as of 18:39, 10 September 2013
Short description: | p@chr11:6340354..6340378, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:6340354..6340378, + |
Coexpression cluster: | C3179_smooth_aorta_heart_vagina_umbilical_bladder_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.76e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.52e-17 | 114 |
primary circulatory organ | 5.94e-13 | 27 |
intestine | 5.37e-10 | 17 |
duct of male reproductive system | 2.25e-09 | 4 |
male reproductive organ | 8.83e-09 | 11 |
gastrointestinal system | 1.21e-08 | 25 |
small intestine | 1.83e-07 | 4 |
heart | 2.59e-07 | 24 |
primitive heart tube | 2.59e-07 | 24 |
primary heart field | 2.59e-07 | 24 |
anterior lateral plate mesoderm | 2.59e-07 | 24 |
heart tube | 2.59e-07 | 24 |
heart primordium | 2.59e-07 | 24 |
cardiac mesoderm | 2.59e-07 | 24 |
cardiogenic plate | 2.59e-07 | 24 |
heart rudiment | 2.59e-07 | 24 |
compound organ | 3.74e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.50e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.