FFCP PHASE1:Hg19::chr11:62752220..62752231,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9356|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10970|TSSclassifier=S|UniProt=|association_with_transcript=-58bp_to_ENST00000421062,ENST00000458333_5end|coexpression_cluster_id=C2149|description=CAGE_peak_4_at_SLC22A6_5end|id=chr11:62752220..62752231,-|ontology_enrichment_celltype=CL:0002575!6.02e-10!2|ontology_enrichment_celltype_v019=CL:0002575;1.34e-40;2!CL:0000669;7.00e-21;4|ontology_enrichment_celltype_v019_2=CL:0002575,1.34e-40,2;CL:0000669,7.00e-21,4|ontology_enrichment_development_v019=UBERON:0006241;2.08e-27;3!UBERON:0003057;2.08e-27;3!UBERON:0003056;7.76e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.66e-97!57;UBERON:0005068!2.66e-97!57;UBERON:0006241!2.66e-97!57;UBERON:0007135!2.66e-97!57;UBERON:0002616!1.38e-78!59;UBERON:0005743!3.97e-76!86;UBERON:0001017!5.55e-76!82;UBERON:0003075!3.10e-73!86;UBERON:0007284!3.10e-73!86;UBERON:0002780!9.03e-73!41;UBERON:0001890!9.03e-73!41;UBERON:0006240!9.03e-73!41;UBERON:0003080!6.48e-71!42;UBERON:0002346!1.27e-69!90;UBERON:0000955!3.88e-69!69;UBERON:0006238!3.88e-69!69;UBERON:0000073!3.18e-68!94;UBERON:0001016!3.18e-68!94;UBERON:0002020!3.59e-60!34;UBERON:0003528!3.59e-60!34;UBERON:0001893!2.08e-59!34;UBERON:0002791!2.94e-56!33;UBERON:0007023!4.33e-53!115;UBERON:0001869!6.79e-53!32;UBERON:0003056!8.05e-51!61;UBERON:0000033!2.29e-40!123;UBERON:0000153!4.05e-38!129;UBERON:0007811!4.05e-38!129;UBERON:0002619!1.73e-35!22;UBERON:0002308!3.61e-35!9;UBERON:0000125!3.61e-35!9;UBERON:0004121!1.71e-34!169;UBERON:0000924!1.68e-33!173;UBERON:0006601!1.68e-33!173;UBERON:0000956!5.48e-31!25;UBERON:0000203!5.48e-31!25;UBERON:0001950!3.56e-29!20;UBERON:0002420!1.31e-27!9;UBERON:0007245!1.31e-27!9;UBERON:0010009!1.31e-27!9;UBERON:0010011!1.31e-27!9;UBERON:0000454!1.31e-27!9;UBERON:0009663!3.08e-27!7;UBERON:0003076!5.42e-26!15;UBERON:0003057!5.42e-26!15;UBERON:0002298!6.92e-25!8;UBERON:0000025!7.93e-23!194;UBERON:0004111!1.06e-16!241;UBERON:0000369!1.67e-16!4;UBERON:0002435!1.67e-16!4;UBERON:0000204!1.67e-16!4;UBERON:0010082!1.67e-16!4;UBERON:0004733!4.35e-16!12;UBERON:0002028!4.35e-16!12;UBERON:0007277!4.35e-16!12;UBERON:0004732!8.96e-15!13;UBERON:0001894!2.26e-14!7;UBERON:0006222!2.26e-14!7;UBERON:0000483!5.22e-14!309;UBERON:0000119!8.70e-14!312;UBERON:0000477!1.08e-13!286;UBERON:0000988!1.48e-13!3;UBERON:0002240!1.90e-13!3;UBERON:0000349!2.44e-13!5;UBERON:0006331!2.76e-13!3;UBERON:0001896!3.53e-13!3;UBERON:0005290!3.53e-13!3;UBERON:0010096!3.53e-13!3;UBERON:0005383!7.09e-13!3;UBERON:0005382!7.09e-13!3;UBERON:0002021!7.21e-13!5;UBERON:0000475!3.78e-12!365;UBERON:0000064!2.76e-10!219;UBERON:0002148!1.14e-09!2;UBERON:0009662!1.14e-09!2;UBERON:0002360!3.12e-09!2;UBERON:0000094!3.12e-09!2;UBERON:0007645!3.12e-09!2;UBERON:0001873!3.67e-09!2;UBERON:0010122!3.67e-09!2;UBERON:0001897!4.89e-09!2;UBERON:0001954!5.10e-09!2;UBERON:0003022!5.10e-09!2;UBERON:0002421!5.10e-09!2;UBERON:0002600!5.10e-09!2;UBERON:0001875!7.33e-09!2;UBERON:0006514!7.33e-09!2;UBERON:0001871!2.76e-08!7;UBERON:0005174!3.09e-08!5;UBERON:0001137!3.09e-08!5;UBERON:0000062!6.56e-08!511;UBERON:0001872!8.30e-08!5;UBERON:0002680!1.59e-07!9;UBERON:0001895!1.59e-07!9;UBERON:0010092!1.59e-07!9;UBERON:0000481!5.83e-07!347|ontology_enrichment_uberon_v019=UBERON:0002240;2.08e-27;3!UBERON:0005174;2.08e-27;3!UBERON:0001137;2.08e-27;3!UBERON:0002360;2.60e-11;2!UBERON:0002148;2.60e-11;2!UBERON:0006331;2.60e-11;2!UBERON:0009662;2.60e-11;2!UBERON:0000094;2.60e-11;2!UBERON:0010743;2.60e-11;2!UBERON:0001897;4.09e-11;2!UBERON:0010225;4.09e-11;2!UBERON:0000988;5.73e-08;3!UBERON:0002114;5.73e-08;2!UBERON:0000489;8.34e-07;29|ontology_enrichment_uberon_v019_2=UBERON:0002240,2.38e-27,3;UBERON:0005174,2.38e-27,3;UBERON:0001137,2.38e-27,3;UBERON:0003076,1.35e-12,15;UBERON:0003057,1.35e-12,15;UBERON:0002148,2.47e-11,2;UBERON:0006331,2.47e-11,2;UBERON:0009662,2.47e-11,2;UBERON:0002360,2.73e-11,2;UBERON:0000094,2.73e-11,2;UBERON:0010743,2.73e-11,2;UBERON:0001897,4.09e-11,2;UBERON:0010225,4.09e-11,2;UBERON:0002114,5.18e-08,2;UBERON:0000988,5.54e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74121620447837,2.05886054286514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9356 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10970 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-58bp_to_ENST00000421062,ENST00000458333_5end | |||
|coexpression_cluster_id=C2149 | |||
|description=CAGE_peak_4_at_SLC22A6_5end | |||
|id=chr11:62752220..62752231,- | |||
|ontology_enrichment_celltype=CL:0002575!6.02e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:0002575;1.34e-40;2!CL:0000669;7.00e-21;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,1.34e-40,2;CL:0000669,7.00e-21,4 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.08e-27;3!UBERON:0003057;2.08e-27;3!UBERON:0003056;7.76e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.66e-97!57;UBERON:0005068!2.66e-97!57;UBERON:0006241!2.66e-97!57;UBERON:0007135!2.66e-97!57;UBERON:0002616!1.38e-78!59;UBERON:0005743!3.97e-76!86;UBERON:0001017!5.55e-76!82;UBERON:0003075!3.10e-73!86;UBERON:0007284!3.10e-73!86;UBERON:0002780!9.03e-73!41;UBERON:0001890!9.03e-73!41;UBERON:0006240!9.03e-73!41;UBERON:0003080!6.48e-71!42;UBERON:0002346!1.27e-69!90;UBERON:0000955!3.88e-69!69;UBERON:0006238!3.88e-69!69;UBERON:0000073!3.18e-68!94;UBERON:0001016!3.18e-68!94;UBERON:0002020!3.59e-60!34;UBERON:0003528!3.59e-60!34;UBERON:0001893!2.08e-59!34;UBERON:0002791!2.94e-56!33;UBERON:0007023!4.33e-53!115;UBERON:0001869!6.79e-53!32;UBERON:0003056!8.05e-51!61;UBERON:0000033!2.29e-40!123;UBERON:0000153!4.05e-38!129;UBERON:0007811!4.05e-38!129;UBERON:0002619!1.73e-35!22;UBERON:0002308!3.61e-35!9;UBERON:0000125!3.61e-35!9;UBERON:0004121!1.71e-34!169;UBERON:0000924!1.68e-33!173;UBERON:0006601!1.68e-33!173;UBERON:0000956!5.48e-31!25;UBERON:0000203!5.48e-31!25;UBERON:0001950!3.56e-29!20;UBERON:0002420!1.31e-27!9;UBERON:0007245!1.31e-27!9;UBERON:0010009!1.31e-27!9;UBERON:0010011!1.31e-27!9;UBERON:0000454!1.31e-27!9;UBERON:0009663!3.08e-27!7;UBERON:0003076!5.42e-26!15;UBERON:0003057!5.42e-26!15;UBERON:0002298!6.92e-25!8;UBERON:0000025!7.93e-23!194;UBERON:0004111!1.06e-16!241;UBERON:0000369!1.67e-16!4;UBERON:0002435!1.67e-16!4;UBERON:0000204!1.67e-16!4;UBERON:0010082!1.67e-16!4;UBERON:0004733!4.35e-16!12;UBERON:0002028!4.35e-16!12;UBERON:0007277!4.35e-16!12;UBERON:0004732!8.96e-15!13;UBERON:0001894!2.26e-14!7;UBERON:0006222!2.26e-14!7;UBERON:0000483!5.22e-14!309;UBERON:0000119!8.70e-14!312;UBERON:0000477!1.08e-13!286;UBERON:0000988!1.48e-13!3;UBERON:0002240!1.90e-13!3;UBERON:0000349!2.44e-13!5;UBERON:0006331!2.76e-13!3;UBERON:0001896!3.53e-13!3;UBERON:0005290!3.53e-13!3;UBERON:0010096!3.53e-13!3;UBERON:0005383!7.09e-13!3;UBERON:0005382!7.09e-13!3;UBERON:0002021!7.21e-13!5;UBERON:0000475!3.78e-12!365;UBERON:0000064!2.76e-10!219;UBERON:0002148!1.14e-09!2;UBERON:0009662!1.14e-09!2;UBERON:0002360!3.12e-09!2;UBERON:0000094!3.12e-09!2;UBERON:0007645!3.12e-09!2;UBERON:0001873!3.67e-09!2;UBERON:0010122!3.67e-09!2;UBERON:0001897!4.89e-09!2;UBERON:0001954!5.10e-09!2;UBERON:0003022!5.10e-09!2;UBERON:0002421!5.10e-09!2;UBERON:0002600!5.10e-09!2;UBERON:0001875!7.33e-09!2;UBERON:0006514!7.33e-09!2;UBERON:0001871!2.76e-08!7;UBERON:0005174!3.09e-08!5;UBERON:0001137!3.09e-08!5;UBERON:0000062!6.56e-08!511;UBERON:0001872!8.30e-08!5;UBERON:0002680!1.59e-07!9;UBERON:0001895!1.59e-07!9;UBERON:0010092!1.59e-07!9;UBERON:0000481!5.83e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;2.08e-27;3!UBERON:0005174;2.08e-27;3!UBERON:0001137;2.08e-27;3!UBERON:0002360;2.60e-11;2!UBERON:0002148;2.60e-11;2!UBERON:0006331;2.60e-11;2!UBERON:0009662;2.60e-11;2!UBERON:0000094;2.60e-11;2!UBERON:0010743;2.60e-11;2!UBERON:0001897;4.09e-11;2!UBERON:0010225;4.09e-11;2!UBERON:0000988;5.73e-08;3!UBERON:0002114;5.73e-08;2!UBERON:0000489;8.34e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,2.38e-27,3;UBERON:0005174,2.38e-27,3;UBERON:0001137,2.38e-27,3;UBERON:0003076,1.35e-12,15;UBERON:0003057,1.35e-12,15;UBERON:0002148,2.47e-11,2;UBERON:0006331,2.47e-11,2;UBERON:0009662,2.47e-11,2;UBERON:0002360,2.73e-11,2;UBERON:0000094,2.73e-11,2;UBERON:0010743,2.73e-11,2;UBERON:0001897,4.09e-11,2;UBERON:0010225,4.09e-11,2;UBERON:0002114,5.18e-08,2;UBERON:0000988,5.54e-08,3 | |||
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|short_description=p4@SLC22A6 | |||
}} |
Revision as of 18:37, 10 September 2013
Short description: | p4@SLC22A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SLC22A6_5end |
Coexpression cluster: | C2149_Pericytes_spinal_kidney_cerebral_temporal_duodenum_retina |
Association with transcript: | -58bp_to_ENST00000421062, ENST00000458333_5end |
EntrezGene: | SLC22A6 |
HGNC: | 10970 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 1.34e-40 | 2 |
pericyte cell | 7.00e-21 | 4 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 2.38e-27 | 3 |
dorsal region element | 2.38e-27 | 3 |
dorsum | 2.38e-27 | 3 |
posterior neural tube | 1.35e-12 | 15 |
chordal neural plate | 1.35e-12 | 15 |
locus ceruleus | 2.47e-11 | 2 |
brainstem nucleus | 2.47e-11 | 2 |
hindbrain nucleus | 2.47e-11 | 2 |
meninx | 2.73e-11 | 2 |
membrane organ | 2.73e-11 | 2 |
meningeal cluster | 2.73e-11 | 2 |
dorsal plus ventral thalamus | 4.09e-11 | 2 |
thalamic complex | 4.09e-11 | 2 |
duodenum | 5.18e-08 | 2 |
pons | 5.54e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.