FFCP PHASE1:Hg19::chr11:2154872..2154893,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3481|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=5466|TSSclassifier=S|UniProt=|association_with_transcript=10bp_to_uc001lvf.2_5end|coexpression_cluster_id=C172|description=CAGE_peak_38_at_IGF2_5end|id=chr11:2154872..2154893,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000349;2.88e-21;19!CL:0000182;3.80e-08;12!CL:0002541;5.28e-08;3!CL:0002537;7.83e-08;5!CL:0002577;9.19e-08;3|ontology_enrichment_celltype_v019_2=CL:0000349,2.77e-21,19;CL:0000182,3.22e-08,12;CL:0002541,4.83e-08,3;CL:0002577,8.15e-08,3;CL:0002537,9.85e-08,5|ontology_enrichment_development_v019=UBERON:0004161;5.86e-07;11|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!2.37e-14!14;UBERON:0000158!2.37e-14!14;UBERON:0000478!5.05e-10!24;UBERON:0003124!2.74e-08!7;UBERON:0004923!3.99e-08!57;UBERON:0000305!1.09e-07!7|ontology_enrichment_uberon_v019=UBERON:0000478;2.50e-21;24!UBERON:0005631;3.18e-18;10!UBERON:0000158;3.18e-18;10!UBERON:0000305;5.14e-12;7!UBERON:0002107;2.28e-11;19!UBERON:0006925;2.28e-11;19!UBERON:0001987;8.77e-10;4!UBERON:0002423;4.76e-08;25!UBERON:0003124;5.28e-08;3!UBERON:0000920;5.28e-08;3!UBERON:0000922;1.66e-07;49|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.09e-26,14;UBERON:0000158,3.09e-26,14;UBERON:0000478,2.48e-21,24;UBERON:0003124,3.52e-16,7;UBERON:0000305,6.74e-12,7;UBERON:0002107,2.16e-11,19;UBERON:0006925,2.16e-11,19;UBERON:0008836,2.16e-11,19;UBERON:0004871,2.71e-10,8;UBERON:0001987,7.97e-10,4;UBERON:0004340,7.97e-10,4;UBERON:0008835,1.70e-09,22;UBERON:0003894,1.70e-09,22;UBERON:0009854,5.63e-09,23;UBERON:0007499,4.59e-08,25;UBERON:0009497,4.59e-08,25;UBERON:0000015,4.59e-08,25;UBERON:0002423,4.59e-08,25;UBERON:0006235,4.59e-08,25;UBERON:0004161,4.59e-08,25;UBERON:0000920,4.83e-08,3;UBERON:0009856,1.16e-07,26|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,1.0007329835313,0.893922188854576,3.48935409640147,0,0,0,0,0,16.1646615376327,16.0897856719357,0.990130823680373,0.331397375727916,0,0,0,0,0.492484232307152,1.83600622119828,1.25381888591235,0,0,0,0,0,0,0,0,1.23852898652861,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0.579386075843295,0,0,0.0945348171640679,0,0.263504357079378,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0.622422070799533,0,0,2.4217188423189,4.03323147135999,0,0,0,0,0,0,0,0,0,0,0,2.47266929278557,0,0.718618141816238,0.168336113954066,0.500474079487857,0,0.438977620880838,0,0.751190294532984,0.226864366320042,0,0.427114777637135,0,0,0,0,0,0.168776332241266,0,0,0,0.323292113637624,0.355009592516614,0,0.169560592310488,0,0,0,0,0,1.62671520017326,1.34759371519982,0.252320850875628,0,0,0,0,2.78620756819187,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,3.80265104465493,1.96565443335525,1.18157981336281,0,9.47010976781974,0,0,0,0.201057944823262,0.555530670951178,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,4.79556075716608,0.22001485746285,0,3.57656445851882,0,0.531876233169741,1.04007436911366,0.514414748524284,0,0.532844358032199,1.00084595560703,21.7048642156577,0,0,0.355391948742546,1.58390374586686,0,0,0.199945982364114,0,0,0,0,0,0,0.434343920002738,1.84928690295345,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20844685094452,2.50085260529839,0.813795071099207,3.11956292296211,2.3195768543631,1.73472656537328,1.40569697991256,0,0,0,0,0.184369168541703,0,23.3003377380661,33.284912109653,0,0,0,2.72814814301633,16.6435439510497,13.0027826131763,0,0.61384789315225,0.280660094433074,0,3.58195074346692,0,4.45254199334973,0,0.177561725313127,0,0,0,8.09758312263869,0.200506470303285,0,0.34444334449382,0.910455840033585,0.655622074797121,0,0.308061348417659,0,0,0,0,0.170093705276516,0.647747748306418,1.54227252690289,0.812839312631559,1.00337954770971,0,0,0.447749509444357,0,0,0,0.328014645699706,0,1.54561517471583,0.0915694648183434,0,0,0,0,0.48335359146061,0.308097234229289,0.460511024178389,1.10269257987624,0,0.580066775656914,0.170453254832202,5.69805028139119,0,0.384380134730212,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,1.14378116354295,0.255897791311334,0.855877976067841,0,0,0.539617372749944,0.823611089208164,0,0,0,0,1.46290121726877,0,0,0.818999468447914,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.589494246078727,0,0,0,0.658589785919804,0.75894634753143,0.349934720244983,0,0,0,1.7887322147588,2.15252686335615,0,1.33029046061003,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3481 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5466 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=10bp_to_uc001lvf.2_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_38_at_IGF2_5end | |||
|id=chr11:2154872..2154893,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.88e-21;19!CL:0000182;3.80e-08;12!CL:0002541;5.28e-08;3!CL:0002537;7.83e-08;5!CL:0002577;9.19e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.77e-21,19;CL:0000182,3.22e-08,12;CL:0002541,4.83e-08,3;CL:0002577,8.15e-08,3;CL:0002537,9.85e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.86e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.37e-14!14;UBERON:0000158!2.37e-14!14;UBERON:0000478!5.05e-10!24;UBERON:0003124!2.74e-08!7;UBERON:0004923!3.99e-08!57;UBERON:0000305!1.09e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.50e-21;24!UBERON:0005631;3.18e-18;10!UBERON:0000158;3.18e-18;10!UBERON:0000305;5.14e-12;7!UBERON:0002107;2.28e-11;19!UBERON:0006925;2.28e-11;19!UBERON:0001987;8.77e-10;4!UBERON:0002423;4.76e-08;25!UBERON:0003124;5.28e-08;3!UBERON:0000920;5.28e-08;3!UBERON:0000922;1.66e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.09e-26,14;UBERON:0000158,3.09e-26,14;UBERON:0000478,2.48e-21,24;UBERON:0003124,3.52e-16,7;UBERON:0000305,6.74e-12,7;UBERON:0002107,2.16e-11,19;UBERON:0006925,2.16e-11,19;UBERON:0008836,2.16e-11,19;UBERON:0004871,2.71e-10,8;UBERON:0001987,7.97e-10,4;UBERON:0004340,7.97e-10,4;UBERON:0008835,1.70e-09,22;UBERON:0003894,1.70e-09,22;UBERON:0009854,5.63e-09,23;UBERON:0007499,4.59e-08,25;UBERON:0009497,4.59e-08,25;UBERON:0000015,4.59e-08,25;UBERON:0002423,4.59e-08,25;UBERON:0006235,4.59e-08,25;UBERON:0004161,4.59e-08,25;UBERON:0000920,4.83e-08,3;UBERON:0009856,1.16e-07,26 | |||
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| |||
|short_description=p38@IGF2 | |||
}} |
Revision as of 17:12, 10 September 2013
Short description: | p38@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_38_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 10bp_to_uc001lvf.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.77e-21 | 19 |
hepatocyte | 3.22e-08 | 12 |
chorionic membrane mesenchymal stem cell | 4.83e-08 | 3 |
placental epithelial cell | 8.15e-08 | 3 |
amnion mesenchymal stem cell | 9.85e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.09e-26 | 14 |
membranous layer | 3.09e-26 | 14 |
extraembryonic structure | 2.48e-21 | 24 |
chorion | 3.52e-16 | 7 |
amnion | 6.74e-12 | 7 |
liver | 2.16e-11 | 19 |
digestive gland | 2.16e-11 | 19 |
liver bud | 2.16e-11 | 19 |
somatic layer of lateral plate mesoderm | 2.71e-10 | 8 |
placenta | 7.97e-10 | 4 |
allantois | 7.97e-10 | 4 |
hepatic diverticulum | 1.70e-09 | 22 |
liver primordium | 1.70e-09 | 22 |
digestive tract diverticulum | 5.63e-09 | 23 |
epithelial sac | 4.59e-08 | 25 |
epithelium of foregut-midgut junction | 4.59e-08 | 25 |
anatomical boundary | 4.59e-08 | 25 |
hepatobiliary system | 4.59e-08 | 25 |
foregut-midgut junction | 4.59e-08 | 25 |
septum transversum | 4.59e-08 | 25 |
egg chorion | 4.83e-08 | 3 |
sac | 1.16e-07 | 26 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.