FFCP PHASE1:Hg19::chr11:208773..208814,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=60626 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29550 | |||
|TSSclassifier=S | |||
|UniProt=E9PLE5,E9PI04 | |||
|association_with_transcript=0bp_to_ENST00000526982,ENST00000528357_5end | |||
|description=CAGE_peak_2_at_RIC8A_5end | |||
|id=chr11:208773..208814,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.43e-24!180;CL:0000220!1.08e-16!246;CL:0002321!3.29e-16!248;CL:0002371!2.71e-14!591;CL:0000222!3.73e-14!119;CL:0000144!5.95e-14!625;CL:0000057!1.54e-12!75;CL:0000183!2.97e-12!59;CL:0000548!1.14e-10!679;CL:0000004!1.14e-10!679;CL:0000255!1.14e-10!679;CL:0000680!4.00e-10!57;CL:0000056!4.00e-10!57;CL:0000355!4.00e-10!57;CL:0000187!5.48e-10!54;CL:0000012!6.81e-10!682;CL:0000192!1.37e-09!42;CL:0000514!1.37e-09!42;CL:0000393!3.26e-08!60;CL:0000211!3.26e-08!60;CL:0000003!2.09e-07!722;CL:0000359!4.22e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.24e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.04e-16,250;CL:0000222,4.16e-14,121;CL:0000057,1.17e-12,76;CL:0000680,1.06e-09,58;CL:0000056,1.06e-09,58;CL:0000355,1.06e-09,58;CL:0000187,1.48e-09,55;CL:0000192,4.26e-09,43;CL:0000514,4.26e-09,43;CL:0000393,7.24e-08,61;CL:0000211,7.24e-08,61;CL:0000359,4.22e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003102;9.50e-08;50!UBERON:0002199;7.89e-07;46!UBERON:0002416;7.89e-07;46!UBERON:0002097;8.93e-07;41 | |||
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| |||
|short_description=p2@RIC8A | |||
}} |
Revision as of 17:11, 10 September 2013
Short description: | p2@RIC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RIC8A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000526982, ENST00000528357_5end |
EntrezGene: | RIC8A |
HGNC: | 29550 |
UniProt: | E9PLE5E9PI04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.04e-16 | 250 |
mesodermal cell | 4.16e-14 | 121 |
fibroblast | 1.17e-12 | 76 |
muscle precursor cell | 1.06e-09 | 58 |
myoblast | 1.06e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.06e-09 | 58 |
muscle cell | 1.48e-09 | 55 |
smooth muscle cell | 4.26e-09 | 43 |
smooth muscle myoblast | 4.26e-09 | 43 |
electrically responsive cell | 7.24e-08 | 61 |
electrically active cell | 7.24e-08 | 61 |
vascular associated smooth muscle cell | 4.22e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 2.84e-12 | 78 |
multilaminar epithelium | 8.18e-12 | 83 |
somite | 3.97e-10 | 71 |
presomitic mesoderm | 3.97e-10 | 71 |
presumptive segmental plate | 3.97e-10 | 71 |
dermomyotome | 3.97e-10 | 71 |
trunk paraxial mesoderm | 3.97e-10 | 71 |
dense mesenchyme tissue | 4.57e-10 | 73 |
paraxial mesoderm | 5.48e-10 | 72 |
presumptive paraxial mesoderm | 5.48e-10 | 72 |
integument | 6.36e-10 | 46 |
integumental system | 6.36e-10 | 46 |
surface structure | 8.27e-10 | 99 |
unilaminar epithelium | 3.09e-09 | 148 |
cell layer | 4.46e-09 | 309 |
trunk mesenchyme | 8.18e-09 | 122 |
epithelium | 1.10e-08 | 306 |
mesenchyme | 1.60e-08 | 160 |
entire embryonic mesenchyme | 1.60e-08 | 160 |
skin of body | 2.48e-08 | 41 |
skeletal muscle tissue | 6.30e-08 | 62 |
striated muscle tissue | 6.30e-08 | 62 |
myotome | 6.30e-08 | 62 |
muscle tissue | 7.68e-08 | 64 |
musculature | 7.68e-08 | 64 |
musculature of body | 7.68e-08 | 64 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.