FFCP PHASE1:Hg19::chr11:18417848..18417887,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3939|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6535|TSSclassifier=S|UniProt=|association_with_transcript=23bp_to_ENST00000379412_5end|description=CAGE_peak_5_at_LDHA_5end|id=chr11:18417848..18417887,+|ontology_enrichment_celltype=CL:0000133!4.52e-07!59;CL:0000066!9.07e-07!254|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000047,4.12e-09,8|ontology_enrichment_development_v019=UBERON:0008947;1.89e-09;29|ontology_enrichment_disease=DOID:162!1.16e-14!235;DOID:14566!5.01e-14!239;DOID:0050687!6.65e-14!143;DOID:305!1.27e-13!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,7.45e-08,106;DOID:0050687,2.64e-07,143;DOID:162,6.50e-07,235|ontology_enrichment_uberon=UBERON:0001737!6.31e-07!9|ontology_enrichment_uberon_v019=UBERON:0001737;3.98e-16;9!UBERON:0001557;3.98e-16;9|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.09e-16,9;UBERON:0001557,4.29e-08,19|phase1_expression=2.90685406832891,1.2846031433459,1.83240725324762,0,0.893922188854576,1.74467704820074,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0.487932798790507,0.123121058076788,0,0,1.43117993565528,0.958120975510189,0.376627918784408,0.152826811495903,0.0821005894499457,0.393553906568396,0,0.383829398097213,0,0.919421224478927,0,0,0.232401601740905,0,0.587200878669695,0,0,0,0.671746422719773,0,0,0.290796477559129,0,0.485168122375632,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0,1.03423704220986,0,2.70852973188684,0.188242339542605,0,0,1.22433556948361,0.320929027076094,0,0,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0.368277635987565,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0.255725123687061,1.0843174571537,0,0.289693037921647,0.795285947051099,0,0.378139268656271,0.221729397462564,0.527008714158756,4.45328856692223,0,0,0,0.174129737299267,0,0,0,0,0.39752481473341,0.860234595106124,0,0.56530794192401,0,0,0.626984899610432,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0,0.337834441449967,0,0,0,0,0,0.436094052142534,2.98183171017191,0.506522046658319,0.264818361626438,0,0.354668382198357,0,0,0,0.311211035399766,0,0.817309515567294,0,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0,0.280901613404497,0.204154171254893,0.245668634623536,0.309977343527296,1.18800285728205,0,0,0,0.673344455816265,0.500474079487857,0,0.438977620880838,0,0,1.02088964844019,0.717558542755448,0.213557388818567,0,0,0.309157587715317,0.257640540045629,0.18611685633159,0.675105328965065,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0.710019185033229,0.503760491138201,0.169560592310488,0.386521706326594,0.545492241181669,0.860413786167011,1.21973706129595,1.85541675650079,1.04574548582567,0.932949495138334,1.26160425437814,1.82488679537915,1.56449532329816,0,2.76269842704961,0.464367928031979,0.721879481669586,2.48444280083672,2.36018566109342,1.20505514941741,1.65440959098591,3.05031221729369,1.18635309555548,2.42696354688296,1.96221465125346,1.53898862778556,0.738155454624648,0,0,0,0,0.982827216677626,0,0,1.35287282397425,0.343135620597051,0.329250856225877,1.1240175325762,0.301586917234893,0.370353780634118,0,0,0,0.115930404975077,0,0.433099343283221,0.925971025153221,0.570762456703795,0.790204397959275,0.858486162094873,0.492434012174795,0,0,0,0,0.141775097242386,1.25381931783988,0.581267877027924,0,1.97065295158377,0.176096868026452,0,0.144119953416961,0,0.63497894292169,0.381988425558278,0,0,0.205654985406647,0.901029173531752,0.285826432630578,0.224262168690721,0.43596006883328,0.2933531432838,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,0,0.799266537048298,0.285955987316295,0,0,0,0,0,0,0,0.499864955910285,1.2162378064119,0,0,0,0,0,0.723906533337896,0,0,0.448340575974109,0.197030760201927,0.431255149719035,0.128343036279748,2.03275699377971,3.90419561572865,0.773288812777695,0.502548796003046,3.18969375826582,0.749007023947182,0,1.65766205374414,0.36807447515742,0.500170521059677,0,1.03985430765404,1.60586089917446,0.788512075169673,1.28855556491985,0.300946099727719,0,0,0.664225598535437,0.553107505625109,0.434418072340414,0,0,0,0,0,0,0,0.30239029332968,2.23297027036899,0.61384789315225,0,1.02511319404561,0,0.482561763430822,2.96836132889982,0.154209693802656,0.355123450626254,0.492762936082855,0.519254429183621,0.581051892299796,0.241718899183244,1.20303882181971,0.552485933615378,0.459257792658427,0.728364672026868,0.131124414959424,0.451199612907412,0.231046011313244,0,1.46139224653261,0.316654886678627,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,1.31555925987561,1.8300481571743,0.512900250232778,0,0.325378394664303,0.103041011647722,0.27470839445503,0.165018999841176,0,0.650060246036521,0,0.290012154876366,0.462145851343933,0.61401469890451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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3939 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6535 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=23bp_to_ENST00000379412_5end | |||
|description=CAGE_peak_5_at_LDHA_5end | |||
|id=chr11:18417848..18417887,+ | |||
|ontology_enrichment_celltype=CL:0000133!4.52e-07!59;CL:0000066!9.07e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.12e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.89e-09;29 | |||
|ontology_enrichment_disease=DOID:162!1.16e-14!235;DOID:14566!5.01e-14!239;DOID:0050687!6.65e-14!143;DOID:305!1.27e-13!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.45e-08,106;DOID:0050687,2.64e-07,143;DOID:162,6.50e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0001737!6.31e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.98e-16;9!UBERON:0001557;3.98e-16;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.09e-16,9;UBERON:0001557,4.29e-08,19 | |||
|phase1_expression=2.90685406832891,1.2846031433459,1.83240725324762,0,0.893922188854576,1.74467704820074,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0.487932798790507,0.123121058076788,0,0,1.43117993565528,0.958120975510189,0.376627918784408,0.152826811495903,0.0821005894499457,0.393553906568396,0,0.383829398097213,0,0.919421224478927,0,0,0.232401601740905,0,0.587200878669695,0,0,0,0.671746422719773,0,0,0.290796477559129,0,0.485168122375632,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0,1.03423704220986,0,2.70852973188684,0.188242339542605,0,0,1.22433556948361,0.320929027076094,0,0,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0.368277635987565,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0.255725123687061,1.0843174571537,0,0.289693037921647,0.795285947051099,0,0.378139268656271,0.221729397462564,0.527008714158756,4.45328856692223,0,0,0,0.174129737299267,0,0,0,0,0.39752481473341,0.860234595106124,0,0.56530794192401,0,0,0.626984899610432,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0,0.337834441449967,0,0,0,0,0,0.436094052142534,2.98183171017191,0.506522046658319,0.264818361626438,0,0.354668382198357,0,0,0,0.311211035399766,0,0.817309515567294,0,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0,0.280901613404497,0.204154171254893,0.245668634623536,0.309977343527296,1.18800285728205,0,0,0,0.673344455816265,0.500474079487857,0,0.438977620880838,0,0,1.02088964844019,0.717558542755448,0.213557388818567,0,0,0.309157587715317,0.257640540045629,0.18611685633159,0.675105328965065,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0.710019185033229,0.503760491138201,0.169560592310488,0.386521706326594,0.545492241181669,0.860413786167011,1.21973706129595,1.85541675650079,1.04574548582567,0.932949495138334,1.26160425437814,1.82488679537915,1.56449532329816,0,2.76269842704961,0.464367928031979,0.721879481669586,2.48444280083672,2.36018566109342,1.20505514941741,1.65440959098591,3.05031221729369,1.18635309555548,2.42696354688296,1.96221465125346,1.53898862778556,0.738155454624648,0,0,0,0,0.982827216677626,0,0,1.35287282397425,0.343135620597051,0.329250856225877,1.1240175325762,0.301586917234893,0.370353780634118,0,0,0,0.115930404975077,0,0.433099343283221,0.925971025153221,0.570762456703795,0.790204397959275,0.858486162094873,0.492434012174795,0,0,0,0,0.141775097242386,1.25381931783988,0.581267877027924,0,1.97065295158377,0.176096868026452,0,0.144119953416961,0,0.63497894292169,0.381988425558278,0,0,0.205654985406647,0.901029173531752,0.285826432630578,0.224262168690721,0.43596006883328,0.2933531432838,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,0,0.799266537048298,0.285955987316295,0,0,0,0,0,0,0,0.499864955910285,1.2162378064119,0,0,0,0,0,0.723906533337896,0,0,0.448340575974109,0.197030760201927,0.431255149719035,0.128343036279748,2.03275699377971,3.90419561572865,0.773288812777695,0.502548796003046,3.18969375826582,0.749007023947182,0,1.65766205374414,0.36807447515742,0.500170521059677,0,1.03985430765404,1.60586089917446,0.788512075169673,1.28855556491985,0.300946099727719,0,0,0.664225598535437,0.553107505625109,0.434418072340414,0,0,0,0,0,0,0,0.30239029332968,2.23297027036899,0.61384789315225,0,1.02511319404561,0,0.482561763430822,2.96836132889982,0.154209693802656,0.355123450626254,0.492762936082855,0.519254429183621,0.581051892299796,0.241718899183244,1.20303882181971,0.552485933615378,0.459257792658427,0.728364672026868,0.131124414959424,0.451199612907412,0.231046011313244,0,1.46139224653261,0.316654886678627,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,1.31555925987561,1.8300481571743,0.512900250232778,0,0.325378394664303,0.103041011647722,0.27470839445503,0.165018999841176,0,0.650060246036521,0,0.290012154876366,0.462145851343933,0.614014698904518,0.413509717453592,0.429680979473094,0.145016693914229,0,0.534192213880424,0.495854746082934,0.192190067365106,0.255225424989168,0.10115778085555,0.929691098594572,0.31481234683064,0.6970372701606,0.924100740528266,0.532306030317022,0,0.55597265731176,1.43124886741991,0,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0,0.54907405947211,0.117812402345686,0.404364963146632,1.58510321173008,0,0,0.243713489631284,0,0.545999645631943,0.424216295861138,0,1.10273068709225,0,0.876901770507525,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.573645408816206,0.0982490410131212,0,0.709522128141196,0.422215270595328,0,0.379473173765715,0.699869440489966,0.384888450902048,0.670302275535787,0,0,0,0,0,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,0.79312517629427,0.854592569019785,1.92495971052672,0.245040215981032,0.185803175125719,0.144269212976445,0.0711418433484141,1.75368900001705,0,0.5745161103971,0.211673582723883,0,0.28079717811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| |||
|short_description=p5@LDHA | |||
}} |
Revision as of 17:00, 10 September 2013
Short description: | p5@LDHA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_LDHA_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000379412_5end |
EntrezGene: | LDHA |
HGNC: | 6535 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.12e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.09e-16 | 9 |
upper respiratory tract | 4.29e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.45e-08 | 106 |
cell type cancer | 2.64e-07 | 143 |
cancer | 6.50e-07 | 235 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.