FFCP PHASE1:Hg19::chr11:132950834..132950835,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C14|description=CAGE_peak_at_chr11:132950834..132950835,-|id=chr11:132950834..132950835,-|ontology_enrichment_celltype=CL:0000764!4.37e-23!2;CL:0000765!4.37e-23!2;CL:0000050!4.37e-23!2;CL:0000038!4.37e-23!2;CL:0000558!4.37e-23!2;CL:0000547!4.37e-23!2;CL:0000549!4.37e-23!2;CL:0000550!4.37e-23!2;CL:0000552!4.37e-23!2|ontology_enrichment_celltype_v019=CL:0000764;3.06e-12;2!CL:0000558;3.06e-12;2|ontology_enrichment_celltype_v019_2=CL:0000764,2.90e-12,2;CL:0000765,2.90e-12,2;CL:0000050,2.90e-12,2;CL:0000038,2.90e-12,2;CL:0000558,2.90e-12,2;CL:0000547,2.90e-12,2;CL:0000549,2.90e-12,2;CL:0000550,2.90e-12,2;CL:0000552,2.90e-12,2|ontology_enrichment_development_v019=UBERON:0000358;2.09e-23;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!3.47e-36!15;UBERON:0000179!3.47e-36!15;UBERON:0000463!3.47e-36!15;UBERON:0007023!3.35e-10!115;UBERON:0000341!9.54e-07!2|ontology_enrichment_uberon_v019=UBERON:0000178;2.98e-71;15!UBERON:0000179;2.98e-71;15!UBERON:0000463;2.98e-71;15!UBERON:0002390;4.50e-31;32!UBERON:0002193;6.85e-18;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.14e-71,15;UBERON:0000179,3.14e-71,15;UBERON:0000463,3.14e-71,15;UBERON:0007023,3.63e-12,114;UBERON:0002390,8.56e-11,98;UBERON:0003061,8.56e-11,98;UBERON:0004535,8.68e-10,109;UBERON:0002193,8.68e-10,108;UBERON:0001009,1.61e-09,112|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04468565539302,2.29391162142713,1.70894156152249,2.38231775457789,1.23408681925858,1.29694662238543,0,11.8968776444141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0|short_description=p@chr11:132950834..132950835,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_at_chr11:132950834..132950835,- | |||
|id=chr11:132950834..132950835,- | |||
|ontology_enrichment_celltype=CL:0000764!4.37e-23!2;CL:0000765!4.37e-23!2;CL:0000050!4.37e-23!2;CL:0000038!4.37e-23!2;CL:0000558!4.37e-23!2;CL:0000547!4.37e-23!2;CL:0000549!4.37e-23!2;CL:0000550!4.37e-23!2;CL:0000552!4.37e-23!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.06e-12;2!CL:0000558;3.06e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.90e-12,2;CL:0000765,2.90e-12,2;CL:0000050,2.90e-12,2;CL:0000038,2.90e-12,2;CL:0000558,2.90e-12,2;CL:0000547,2.90e-12,2;CL:0000549,2.90e-12,2;CL:0000550,2.90e-12,2;CL:0000552,2.90e-12,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.09e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.47e-36!15;UBERON:0000179!3.47e-36!15;UBERON:0000463!3.47e-36!15;UBERON:0007023!3.35e-10!115;UBERON:0000341!9.54e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.98e-71;15!UBERON:0000179;2.98e-71;15!UBERON:0000463;2.98e-71;15!UBERON:0002390;4.50e-31;32!UBERON:0002193;6.85e-18;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.14e-71,15;UBERON:0000179,3.14e-71,15;UBERON:0000463,3.14e-71,15;UBERON:0007023,3.63e-12,114;UBERON:0002390,8.56e-11,98;UBERON:0003061,8.56e-11,98;UBERON:0004535,8.68e-10,109;UBERON:0002193,8.68e-10,108;UBERON:0001009,1.61e-09,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04468565539302,2.29391162142713,1.70894156152249,2.38231775457789,1.23408681925858,1.29694662238543,0,11.8968776444141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p@chr11:132950834..132950835,- | |||
}} |
Revision as of 16:44, 10 September 2013
Short description: | p@chr11:132950834..132950835, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:132950834..132950835, - |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.90e-12 | 2 |
erythroblast | 2.90e-12 | 2 |
megakaryocyte-erythroid progenitor cell | 2.90e-12 | 2 |
erythroid progenitor cell | 2.90e-12 | 2 |
reticulocyte | 2.90e-12 | 2 |
proerythroblast | 2.90e-12 | 2 |
basophilic erythroblast | 2.90e-12 | 2 |
polychromatophilic erythroblast | 2.90e-12 | 2 |
orthochromatic erythroblast | 2.90e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.14e-71 | 15 |
haemolymphatic fluid | 3.14e-71 | 15 |
organism substance | 3.14e-71 | 15 |
adult organism | 3.63e-12 | 114 |
hematopoietic system | 8.56e-11 | 98 |
blood island | 8.56e-11 | 98 |
cardiovascular system | 8.68e-10 | 109 |
hemolymphoid system | 8.68e-10 | 108 |
circulatory system | 1.61e-09 | 112 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.