FFCP PHASE1:Hg19::chr11:125461713..125461724,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3703|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6172|TSSclassifier=S|UniProt=E9PI32|association_with_transcript=106bp_to_ENST00000527606_5end|coexpression_cluster_id=C0|description=CAGE_peak_32_at_STT3A_5end|id=chr11:125461713..125461724,+|ontology_enrichment_celltype=CL:0002057!3.18e-57!42;CL:0000860!2.11e-55!45;CL:0002009!1.05e-42!65;CL:0000557!3.05e-42!71;CL:0000766!1.23e-40!76;CL:0002194!1.43e-39!63;CL:0000576!1.43e-39!63;CL:0000040!1.43e-39!63;CL:0000559!1.43e-39!63;CL:0000839!1.90e-38!70;CL:0000738!5.74e-30!140;CL:0000763!6.99e-29!112;CL:0000049!6.99e-29!112;CL:0002031!1.81e-28!124;CL:0002087!6.76e-26!119;CL:0002032!5.83e-23!165;CL:0000837!5.83e-23!165;CL:0000037!1.99e-22!172;CL:0000566!1.99e-22!172;CL:0000988!2.44e-21!182;CL:0002393!4.59e-10!9;CL:0002397!4.59e-10!9;CL:0000219!4.45e-09!390;CL:0000134!7.08e-08!358;CL:0002320!1.99e-07!365;CL:0000767!9.41e-07!3|ontology_enrichment_celltype_v019=CL:0000860;2.83e-86;33!CL:0002057;2.83e-86;33!CL:0000473;1.74e-59;39!CL:0000234;1.74e-59;39!CL:0000576;4.27e-42;48!CL:0000766;3.96e-25;69!CL:0002087;1.97e-13;104!CL:0000763;1.63e-11;100|ontology_enrichment_celltype_v019_2=CL:0000860,1.96e-80,42;CL:0002057,1.96e-80,42;CL:0000473,5.68e-70,48;CL:0000234,5.68e-70,48;CL:0002009,8.46e-59,61;CL:0002194,2.57e-55,59;CL:0000576,2.57e-55,59;CL:0000040,2.57e-55,59;CL:0000559,2.57e-55,59;CL:0000557,2.60e-53,67;CL:0000839,3.46e-49,66;CL:0000766,7.22e-45,72;CL:0000763,5.96e-32,108;CL:0000049,5.96e-32,108;CL:0002031,1.97e-28,120;CL:0002087,5.83e-27,115;CL:0000738,1.08e-24,136;CL:0002032,2.52e-20,161;CL:0000837,2.52e-20,161;CL:0000037,2.48e-19,168;CL:0000988,3.61e-18,177;CL:0000134,3.25e-07,354;CL:0000219,4.13e-07,386;CL:0002320,5.34e-07,361|ontology_enrichment_development_v019=CL:0002057;4.70e-56;42!CL:0000049;3.00e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!6.99e-38!80;UBERON:0001474!2.65e-34!86;UBERON:0002390!3.48e-34!102;UBERON:0003061!3.48e-34!102;UBERON:0004765!5.77e-32!101;UBERON:0001434!5.77e-32!101;UBERON:0002193!3.48e-31!112;UBERON:0002405!1.81e-28!115;UBERON:0002204!1.65e-19!167;UBERON:0003081!2.85e-13!216;UBERON:0002384!8.04e-07!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.11e-46,76;UBERON:0001474,4.69e-43,82;UBERON:0004765,5.77e-39,90;UBERON:0002405,1.31e-37,93;UBERON:0002390,1.56e-35,98;UBERON:0003061,1.56e-35,98;UBERON:0001434,9.23e-35,100;UBERON:0002193,5.96e-32,108;UBERON:0002204,1.81e-19,167;UBERON:0003081,3.89e-17,203;UBERON:0000926,1.06e-09,315;UBERON:0004120,1.06e-09,315;UBERON:0006603,1.06e-09,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0,0,0,0,0.786728553697808,0.383829398097213,0.464448369948228,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0.755751887377619,0,0.929716147622738,2.46700732813095,2.78735733805593,2.8769239232215,1.7931249457037,2.12834006899727,8.96338769915208,4.51839278508678,5.41705946377367,0.941211697713023,0.818718450173537,0.674170453335254,2.14258724659632,2.56743221660875,2.55734850319616,0.659702600373432,0.997318288108159,0,1.45104619314292,2.8369261234557,1.24564449799115,3.01498398308092,2.60741459210101,2.82345498116652,1.81619850790011,2.20966581592539,1.26584954976354,0.633765858935825,1.4882300997553,0.209658645508376,0.112328631146495,0.150176892841506,0,0.570025487482497,0.59675003159727,0.365328307529268,0,0,0,0,0,0,0.661044872784862,0,0,0,0.382273228125229,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06633274931766,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0.0895585227028483,0.290633938513962,0,0.985326475791887,0.088048434013226,0,0,0,0.190493682876507,0,2.34434894420094,0,0,0.300343057843917,0.285826432630578,0.112131084345361,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3703 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6172 | |||
|TSSclassifier=S | |||
|UniProt=E9PI32 | |||
|association_with_transcript=106bp_to_ENST00000527606_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_32_at_STT3A_5end | |||
|id=chr11:125461713..125461724,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.18e-57!42;CL:0000860!2.11e-55!45;CL:0002009!1.05e-42!65;CL:0000557!3.05e-42!71;CL:0000766!1.23e-40!76;CL:0002194!1.43e-39!63;CL:0000576!1.43e-39!63;CL:0000040!1.43e-39!63;CL:0000559!1.43e-39!63;CL:0000839!1.90e-38!70;CL:0000738!5.74e-30!140;CL:0000763!6.99e-29!112;CL:0000049!6.99e-29!112;CL:0002031!1.81e-28!124;CL:0002087!6.76e-26!119;CL:0002032!5.83e-23!165;CL:0000837!5.83e-23!165;CL:0000037!1.99e-22!172;CL:0000566!1.99e-22!172;CL:0000988!2.44e-21!182;CL:0002393!4.59e-10!9;CL:0002397!4.59e-10!9;CL:0000219!4.45e-09!390;CL:0000134!7.08e-08!358;CL:0002320!1.99e-07!365;CL:0000767!9.41e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.83e-86;33!CL:0002057;2.83e-86;33!CL:0000473;1.74e-59;39!CL:0000234;1.74e-59;39!CL:0000576;4.27e-42;48!CL:0000766;3.96e-25;69!CL:0002087;1.97e-13;104!CL:0000763;1.63e-11;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.96e-80,42;CL:0002057,1.96e-80,42;CL:0000473,5.68e-70,48;CL:0000234,5.68e-70,48;CL:0002009,8.46e-59,61;CL:0002194,2.57e-55,59;CL:0000576,2.57e-55,59;CL:0000040,2.57e-55,59;CL:0000559,2.57e-55,59;CL:0000557,2.60e-53,67;CL:0000839,3.46e-49,66;CL:0000766,7.22e-45,72;CL:0000763,5.96e-32,108;CL:0000049,5.96e-32,108;CL:0002031,1.97e-28,120;CL:0002087,5.83e-27,115;CL:0000738,1.08e-24,136;CL:0002032,2.52e-20,161;CL:0000837,2.52e-20,161;CL:0000037,2.48e-19,168;CL:0000988,3.61e-18,177;CL:0000134,3.25e-07,354;CL:0000219,4.13e-07,386;CL:0002320,5.34e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;4.70e-56;42!CL:0000049;3.00e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.99e-38!80;UBERON:0001474!2.65e-34!86;UBERON:0002390!3.48e-34!102;UBERON:0003061!3.48e-34!102;UBERON:0004765!5.77e-32!101;UBERON:0001434!5.77e-32!101;UBERON:0002193!3.48e-31!112;UBERON:0002405!1.81e-28!115;UBERON:0002204!1.65e-19!167;UBERON:0003081!2.85e-13!216;UBERON:0002384!8.04e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.11e-46,76;UBERON:0001474,4.69e-43,82;UBERON:0004765,5.77e-39,90;UBERON:0002405,1.31e-37,93;UBERON:0002390,1.56e-35,98;UBERON:0003061,1.56e-35,98;UBERON:0001434,9.23e-35,100;UBERON:0002193,5.96e-32,108;UBERON:0002204,1.81e-19,167;UBERON:0003081,3.89e-17,203;UBERON:0000926,1.06e-09,315;UBERON:0004120,1.06e-09,315;UBERON:0006603,1.06e-09,315 | |||
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|short_description=p32@STT3A | |||
}} |
Revision as of 16:29, 10 September 2013
Short description: | p32@STT3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_32_at_STT3A_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 106bp_to_ENST00000527606_5end |
EntrezGene: | STT3A |
HGNC: | 6172 |
UniProt: | E9PI32 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.96e-80 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.96e-80 | 42 |
defensive cell | 5.68e-70 | 48 |
phagocyte | 5.68e-70 | 48 |
macrophage dendritic cell progenitor | 8.46e-59 | 61 |
monopoietic cell | 2.57e-55 | 59 |
monocyte | 2.57e-55 | 59 |
monoblast | 2.57e-55 | 59 |
promonocyte | 2.57e-55 | 59 |
granulocyte monocyte progenitor cell | 2.60e-53 | 67 |
myeloid lineage restricted progenitor cell | 3.46e-49 | 66 |
myeloid leukocyte | 7.22e-45 | 72 |
myeloid cell | 5.96e-32 | 108 |
common myeloid progenitor | 5.96e-32 | 108 |
hematopoietic lineage restricted progenitor cell | 1.97e-28 | 120 |
nongranular leukocyte | 5.83e-27 | 115 |
leukocyte | 1.08e-24 | 136 |
hematopoietic oligopotent progenitor cell | 2.52e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.52e-20 | 161 |
hematopoietic stem cell | 2.48e-19 | 168 |
hematopoietic cell | 3.61e-18 | 177 |
mesenchymal cell | 3.25e-07 | 354 |
motile cell | 4.13e-07 | 386 |
connective tissue cell | 5.34e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.11e-46 | 76 |
bone element | 4.69e-43 | 82 |
skeletal element | 5.77e-39 | 90 |
immune system | 1.31e-37 | 93 |
hematopoietic system | 1.56e-35 | 98 |
blood island | 1.56e-35 | 98 |
skeletal system | 9.23e-35 | 100 |
hemolymphoid system | 5.96e-32 | 108 |
musculoskeletal system | 1.81e-19 | 167 |
lateral plate mesoderm | 3.89e-17 | 203 |
mesoderm | 1.06e-09 | 315 |
mesoderm-derived structure | 1.06e-09 | 315 |
presumptive mesoderm | 1.06e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.