FFCP PHASE1:Hg19::chr11:120208515..120208548,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C5|description=CAGE_peak_at_chr11:120208515..120208548,+|id=chr11:120208515..120208548,+|ontology_enrichment_celltype=CL:0000181!3.12e-14!12;CL:0000417!3.12e-14!12;CL:0000668!3.12e-14!12;CL:0000414!3.12e-14!12;CL:0000412!3.12e-14!12;CL:0000182!3.12e-14!12|ontology_enrichment_celltype_v019=CL:0000182;2.63e-14;12!CL:0002535;3.27e-10;2|ontology_enrichment_celltype_v019_2=CL:0000182,2.63e-14,12;CL:0002535,2.99e-10,2|ontology_enrichment_development_v019=UBERON:0003918;4.19e-08;10!UBERON:0007687;4.19e-08;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4929;3.27e-10;2|ontology_enrichment_disease_v019_2=DOID:4929,3.27e-10,2|ontology_enrichment_uberon=UBERON:0009497!8.85e-13!25;UBERON:0000015!8.85e-13!25;UBERON:0002423!8.85e-13!25;UBERON:0006235!8.85e-13!25;UBERON:0004161!8.85e-13!25;UBERON:0008835!4.66e-12!22;UBERON:0003894!4.66e-12!22;UBERON:0009854!1.86e-11!23;UBERON:0005172!2.55e-11!55;UBERON:0005173!2.55e-11!55;UBERON:0002107!2.79e-11!19;UBERON:0006925!2.79e-11!19;UBERON:0008836!2.79e-11!19;UBERON:0007499!2.12e-10!25;UBERON:0009856!6.21e-10!26;UBERON:0002417!7.29e-10!61;UBERON:0000916!7.29e-10!61;UBERON:0005057!9.20e-10!26;UBERON:0004921!1.13e-08!129;UBERON:0004185!1.13e-08!129;UBERON:0005177!1.48e-08!107;UBERON:0002365!6.17e-08!31;UBERON:0002330!6.17e-08!31;UBERON:0000949!1.13e-07!45;UBERON:0001041!1.91e-07!98;UBERON:0001007!3.92e-07!155;UBERON:0001555!3.92e-07!155;UBERON:0007026!3.92e-07!155;UBERON:0002368!6.45e-07!35;UBERON:0009569!8.09e-07!113|ontology_enrichment_uberon_v019=UBERON:0002107;1.04e-15;19!UBERON:0006925;1.04e-15;19!UBERON:0002423;5.01e-12;25!UBERON:0006955;3.27e-10;2!UBERON:0004801;3.27e-10;2!UBERON:0002365;4.47e-10;31!UBERON:0002330;4.47e-10;31!UBERON:0000949;6.15e-10;43!UBERON:0005172;1.07e-09;52!UBERON:0005173;1.07e-09;52!UBERON:0002368;3.43e-08;33|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.02e-15,19;UBERON:0006925,1.02e-15,19;UBERON:0008836,1.02e-15,19;UBERON:0008835,1.26e-13,22;UBERON:0003894,1.26e-13,22;UBERON:0009854,4.76e-13,23;UBERON:0007499,4.94e-12,25;UBERON:0009497,4.94e-12,25;UBERON:0000015,4.94e-12,25;UBERON:0002423,4.94e-12,25;UBERON:0006235,4.94e-12,25;UBERON:0004161,4.94e-12,25;UBERON:0005172,6.07e-12,54;UBERON:0005173,6.07e-12,54;UBERON:0009856,1.39e-11,26;UBERON:0002417,9.82e-11,60;UBERON:0000916,9.82e-11,60;UBERON:0006955,2.99e-10,2;UBERON:0004801,2.99e-10,2;UBERON:0000949,3.57e-10,45;UBERON:0002365,9.12e-10,31;UBERON:0002330,9.12e-10,31;UBERON:0002368,1.10e-08,35;UBERON:0005177,1.97e-08,101|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68507104770311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,19.0132552232746,5.89696330006576,5.90789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,7.21287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.49592225359776,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,1.25966373927138,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0.195551382734803,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0.236349546921671,0,0.337017719270924,0.492137407573744,0,0,0,0,0,0,0,0,0,0,4.88595385255029,1.04909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,7.62071615126029,0,0.129282956361551,0,0.855434189421647,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr11:120208515..120208548,+ | |||
|id=chr11:120208515..120208548,+ | |||
|ontology_enrichment_celltype=CL:0000181!3.12e-14!12;CL:0000417!3.12e-14!12;CL:0000668!3.12e-14!12;CL:0000414!3.12e-14!12;CL:0000412!3.12e-14!12;CL:0000182!3.12e-14!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.63e-14;12!CL:0002535;3.27e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.63e-14,12;CL:0002535,2.99e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0003918;4.19e-08;10!UBERON:0007687;4.19e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;3.27e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,3.27e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0009497!8.85e-13!25;UBERON:0000015!8.85e-13!25;UBERON:0002423!8.85e-13!25;UBERON:0006235!8.85e-13!25;UBERON:0004161!8.85e-13!25;UBERON:0008835!4.66e-12!22;UBERON:0003894!4.66e-12!22;UBERON:0009854!1.86e-11!23;UBERON:0005172!2.55e-11!55;UBERON:0005173!2.55e-11!55;UBERON:0002107!2.79e-11!19;UBERON:0006925!2.79e-11!19;UBERON:0008836!2.79e-11!19;UBERON:0007499!2.12e-10!25;UBERON:0009856!6.21e-10!26;UBERON:0002417!7.29e-10!61;UBERON:0000916!7.29e-10!61;UBERON:0005057!9.20e-10!26;UBERON:0004921!1.13e-08!129;UBERON:0004185!1.13e-08!129;UBERON:0005177!1.48e-08!107;UBERON:0002365!6.17e-08!31;UBERON:0002330!6.17e-08!31;UBERON:0000949!1.13e-07!45;UBERON:0001041!1.91e-07!98;UBERON:0001007!3.92e-07!155;UBERON:0001555!3.92e-07!155;UBERON:0007026!3.92e-07!155;UBERON:0002368!6.45e-07!35;UBERON:0009569!8.09e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.04e-15;19!UBERON:0006925;1.04e-15;19!UBERON:0002423;5.01e-12;25!UBERON:0006955;3.27e-10;2!UBERON:0004801;3.27e-10;2!UBERON:0002365;4.47e-10;31!UBERON:0002330;4.47e-10;31!UBERON:0000949;6.15e-10;43!UBERON:0005172;1.07e-09;52!UBERON:0005173;1.07e-09;52!UBERON:0002368;3.43e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.02e-15,19;UBERON:0006925,1.02e-15,19;UBERON:0008836,1.02e-15,19;UBERON:0008835,1.26e-13,22;UBERON:0003894,1.26e-13,22;UBERON:0009854,4.76e-13,23;UBERON:0007499,4.94e-12,25;UBERON:0009497,4.94e-12,25;UBERON:0000015,4.94e-12,25;UBERON:0002423,4.94e-12,25;UBERON:0006235,4.94e-12,25;UBERON:0004161,4.94e-12,25;UBERON:0005172,6.07e-12,54;UBERON:0005173,6.07e-12,54;UBERON:0009856,1.39e-11,26;UBERON:0002417,9.82e-11,60;UBERON:0000916,9.82e-11,60;UBERON:0006955,2.99e-10,2;UBERON:0004801,2.99e-10,2;UBERON:0000949,3.57e-10,45;UBERON:0002365,9.12e-10,31;UBERON:0002330,9.12e-10,31;UBERON:0002368,1.10e-08,35;UBERON:0005177,1.97e-08,101 | |||
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|short_description=p@chr11:120208515..120208548,+ | |||
}} |
Revision as of 16:12, 10 September 2013
Short description: | p@chr11:120208515..120208548, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:120208515..120208548, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.63e-14 | 12 |
epithelial cell of cervix | 2.99e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 1.02e-15 | 19 |
digestive gland | 1.02e-15 | 19 |
liver bud | 1.02e-15 | 19 |
hepatic diverticulum | 1.26e-13 | 22 |
liver primordium | 1.26e-13 | 22 |
digestive tract diverticulum | 4.76e-13 | 23 |
epithelial sac | 4.94e-12 | 25 |
epithelium of foregut-midgut junction | 4.94e-12 | 25 |
anatomical boundary | 4.94e-12 | 25 |
hepatobiliary system | 4.94e-12 | 25 |
foregut-midgut junction | 4.94e-12 | 25 |
septum transversum | 4.94e-12 | 25 |
abdomen element | 6.07e-12 | 54 |
abdominal segment element | 6.07e-12 | 54 |
sac | 1.39e-11 | 26 |
abdominal segment of trunk | 9.82e-11 | 60 |
abdomen | 9.82e-11 | 60 |
uterine epithelium | 2.99e-10 | 2 |
cervix epithelium | 2.99e-10 | 2 |
endocrine system | 3.57e-10 | 45 |
exocrine gland | 9.12e-10 | 31 |
exocrine system | 9.12e-10 | 31 |
endocrine gland | 1.10e-08 | 35 |
trunk region element | 1.97e-08 | 101 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 3.27e-10 | 2 |
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