FFCP PHASE1:Hg19::chr10:98591737..98591748,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84458|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29503|TSSclassifier=W|UniProt=Q96JN0|association_with_transcript=-268bp_to_ENST00000540664,NM_001170765,NM_001170766_5end|coexpression_cluster_id=C6|description=CAGE_peak_12_at_LCOR_5end|id=chr10:98591737..98591748,+|ontology_enrichment_celltype=CL:0000988!9.93e-34!182;CL:0000037!2.67e-33!172;CL:0000566!2.67e-33!172;CL:0000738!3.07e-33!140;CL:0002057!1.86e-32!42;CL:0002032!3.97e-31!165;CL:0000837!3.97e-31!165;CL:0000860!5.64e-31!45;CL:0000766!4.64e-30!76;CL:0002031!6.01e-30!124;CL:0000557!8.41e-30!71;CL:0000839!4.82e-29!70;CL:0000763!1.75e-28!112;CL:0000049!1.75e-28!112;CL:0002087!4.06e-27!119;CL:0002009!5.52e-26!65;CL:0002194!3.43e-24!63;CL:0000576!3.43e-24!63;CL:0000040!3.43e-24!63;CL:0000559!3.43e-24!63;CL:0000134!7.24e-13!358;CL:0002320!1.48e-12!365;CL:0002393!1.49e-12!9;CL:0002397!1.49e-12!9;CL:0000219!1.88e-12!390;CL:0000034!6.01e-09!444;CL:0000723!6.50e-08!436;CL:0000048!9.29e-08!430;CL:0000080!5.50e-07!6|ontology_enrichment_celltype_v019=CL:0002393;1.40e-40;6!CL:0002397;1.40e-40;6!CL:0000767;8.38e-21;3!CL:0000764;3.29e-14;2!CL:0000558;3.29e-14;2!CL:0000766;5.52e-13;69!CL:0000576;1.19e-12;48!CL:0000226;8.95e-10;3!CL:0000623;8.95e-10;3!CL:0000842;8.95e-10;3!CL:0000763;2.74e-08;100!CL:0000094;3.98e-08;8!CL:0002032;5.97e-08;1!CL:0000557;5.97e-08;1!CL:0002087;1.05e-07;104|ontology_enrichment_celltype_v019_2=CL:0002393,7.86e-37,9;CL:0002397,7.86e-37,9;CL:0000766,2.40e-26,72;CL:0000037,2.91e-26,168;CL:0000839,9.46e-26,66;CL:0000763,1.00e-25,108;CL:0000049,1.00e-25,108;CL:0000473,6.72e-25,48;CL:0000234,6.72e-25,48;CL:0000988,1.08e-24,177;CL:0000860,1.08e-24,42;CL:0002057,1.08e-24,42;CL:0000738,1.36e-23,136;CL:0002032,2.46e-23,161;CL:0000837,2.46e-23,161;CL:0000557,3.45e-22,67;CL:0000767,9.99e-21,3;CL:0002031,2.43e-20,120;CL:0002194,2.26e-19,59;CL:0000576,2.26e-19,59;CL:0000040,2.26e-19,59;CL:0000559,2.26e-19,59;CL:0002087,4.42e-19,115;CL:0002009,1.17e-18,61;CL:0000764,1.47e-14,2;CL:0000765,1.47e-14,2;CL:0000050,1.47e-14,2;CL:0000038,1.47e-14,2;CL:0000558,1.47e-14,2;CL:0000547,1.47e-14,2;CL:0000549,1.47e-14,2;CL:0000550,1.47e-14,2;CL:0000552,1.47e-14,2;CL:0000134,6.65e-10,354;CL:0000623,1.03e-09,3;CL:0000825,1.03e-09,3;CL:0002320,1.30e-09,361;CL:0000226,1.46e-09,3;CL:0000842,1.46e-09,3;CL:0000034,1.08e-08,441;CL:0000219,1.37e-08,386;CL:0000094,4.24e-08,8;CL:0000048,2.47e-07,427;CL:0000723,3.69e-07,433|ontology_enrichment_development_v019=CL:0002057;4.21e-16;42!CL:0000049;1.16e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.84e-29!102;UBERON:0003061!1.84e-29!102;UBERON:0002371!5.61e-27!80;UBERON:0002193!8.42e-27!112;UBERON:0001474!4.01e-26!86;UBERON:0002405!9.27e-20!115;UBERON:0004765!1.41e-19!101;UBERON:0001434!1.41e-19!101;UBERON:0002384!7.09e-12!375;UBERON:0003081!1.79e-11!216;UBERON:0002204!4.71e-08!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.19e-19,76;UBERON:0002390,2.33e-18,98;UBERON:0003061,2.33e-18,98;UBERON:0001474,1.33e-17,82;UBERON:0002193,2.41e-16,108;UBERON:0004765,8.93e-16,90;UBERON:0002405,3.60e-15,93;UBERON:0001434,6.72e-14,100;UBERON:0002384,3.23e-09,371;UBERON:0002204,4.16e-07,167;UBERON:0003081,4.42e-07,203|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.152826811495903,0,0.0787107813136792,1.57345710739562,1.15148819429164,2.01260960310899,0,0,0,0.387336002901508,0,0.293600439334847,8.86392653651004,7.01905566145496,6.07630438004385,0,0,0,0.290796477559129,0.377875943688809,0.485168122375632,0.929716147622738,0.411167888021826,0.309706370895104,0,0.512321413058201,1.6553756092201,0.344745680736619,0,0,0.188242339542605,0,0.674170453335254,0.612167784741805,0.320929027076094,1.27867425159808,0.989553900560148,0.598390972864896,0.426224750532694,0.290209238628584,0,2.4912889959823,0.502497330513487,0,1.3031330682307,1.21079900526674,0.368277635987565,0.632924774881769,1.47878700418359,1.91343869968539,1.46761051855863,0.786300418025466,1.05123824989054,0.803627933485401,1.71007646244749,0.59675003159727,0.730656615058536,0,0,0,0.853460445133014,0,0,0,0,0.569212969109448,1.17447437874188,0,1.32171328579026,5.60508562981536,0.790152254325231,0.590129310341499,1.17903228824749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0.403213486449465,0.802320587350522,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0.324547393654683,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0.272746120590835,0,0,0,0,0.10366105501537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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84458 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29503 | |||
|TSSclassifier=W | |||
|UniProt=Q96JN0 | |||
|association_with_transcript=-268bp_to_ENST00000540664,NM_001170765,NM_001170766_5end | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_12_at_LCOR_5end | |||
|id=chr10:98591737..98591748,+ | |||
|ontology_enrichment_celltype=CL:0000988!9.93e-34!182;CL:0000037!2.67e-33!172;CL:0000566!2.67e-33!172;CL:0000738!3.07e-33!140;CL:0002057!1.86e-32!42;CL:0002032!3.97e-31!165;CL:0000837!3.97e-31!165;CL:0000860!5.64e-31!45;CL:0000766!4.64e-30!76;CL:0002031!6.01e-30!124;CL:0000557!8.41e-30!71;CL:0000839!4.82e-29!70;CL:0000763!1.75e-28!112;CL:0000049!1.75e-28!112;CL:0002087!4.06e-27!119;CL:0002009!5.52e-26!65;CL:0002194!3.43e-24!63;CL:0000576!3.43e-24!63;CL:0000040!3.43e-24!63;CL:0000559!3.43e-24!63;CL:0000134!7.24e-13!358;CL:0002320!1.48e-12!365;CL:0002393!1.49e-12!9;CL:0002397!1.49e-12!9;CL:0000219!1.88e-12!390;CL:0000034!6.01e-09!444;CL:0000723!6.50e-08!436;CL:0000048!9.29e-08!430;CL:0000080!5.50e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.40e-40;6!CL:0002397;1.40e-40;6!CL:0000767;8.38e-21;3!CL:0000764;3.29e-14;2!CL:0000558;3.29e-14;2!CL:0000766;5.52e-13;69!CL:0000576;1.19e-12;48!CL:0000226;8.95e-10;3!CL:0000623;8.95e-10;3!CL:0000842;8.95e-10;3!CL:0000763;2.74e-08;100!CL:0000094;3.98e-08;8!CL:0002032;5.97e-08;1!CL:0000557;5.97e-08;1!CL:0002087;1.05e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,7.86e-37,9;CL:0002397,7.86e-37,9;CL:0000766,2.40e-26,72;CL:0000037,2.91e-26,168;CL:0000839,9.46e-26,66;CL:0000763,1.00e-25,108;CL:0000049,1.00e-25,108;CL:0000473,6.72e-25,48;CL:0000234,6.72e-25,48;CL:0000988,1.08e-24,177;CL:0000860,1.08e-24,42;CL:0002057,1.08e-24,42;CL:0000738,1.36e-23,136;CL:0002032,2.46e-23,161;CL:0000837,2.46e-23,161;CL:0000557,3.45e-22,67;CL:0000767,9.99e-21,3;CL:0002031,2.43e-20,120;CL:0002194,2.26e-19,59;CL:0000576,2.26e-19,59;CL:0000040,2.26e-19,59;CL:0000559,2.26e-19,59;CL:0002087,4.42e-19,115;CL:0002009,1.17e-18,61;CL:0000764,1.47e-14,2;CL:0000765,1.47e-14,2;CL:0000050,1.47e-14,2;CL:0000038,1.47e-14,2;CL:0000558,1.47e-14,2;CL:0000547,1.47e-14,2;CL:0000549,1.47e-14,2;CL:0000550,1.47e-14,2;CL:0000552,1.47e-14,2;CL:0000134,6.65e-10,354;CL:0000623,1.03e-09,3;CL:0000825,1.03e-09,3;CL:0002320,1.30e-09,361;CL:0000226,1.46e-09,3;CL:0000842,1.46e-09,3;CL:0000034,1.08e-08,441;CL:0000219,1.37e-08,386;CL:0000094,4.24e-08,8;CL:0000048,2.47e-07,427;CL:0000723,3.69e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;4.21e-16;42!CL:0000049;1.16e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.84e-29!102;UBERON:0003061!1.84e-29!102;UBERON:0002371!5.61e-27!80;UBERON:0002193!8.42e-27!112;UBERON:0001474!4.01e-26!86;UBERON:0002405!9.27e-20!115;UBERON:0004765!1.41e-19!101;UBERON:0001434!1.41e-19!101;UBERON:0002384!7.09e-12!375;UBERON:0003081!1.79e-11!216;UBERON:0002204!4.71e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.19e-19,76;UBERON:0002390,2.33e-18,98;UBERON:0003061,2.33e-18,98;UBERON:0001474,1.33e-17,82;UBERON:0002193,2.41e-16,108;UBERON:0004765,8.93e-16,90;UBERON:0002405,3.60e-15,93;UBERON:0001434,6.72e-14,100;UBERON:0002384,3.23e-09,371;UBERON:0002204,4.16e-07,167;UBERON:0003081,4.42e-07,203 | |||
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|short_description=p12@LCOR | |||
}} |
Revision as of 15:13, 10 September 2013
Short description: | p12@LCOR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_LCOR_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | -268bp_to_ENST00000540664, NM_001170765, NM_001170766_5end |
EntrezGene: | LCOR |
HGNC: | 29503 |
UniProt: | Q96JN0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.19e-19 | 76 |
hematopoietic system | 2.33e-18 | 98 |
blood island | 2.33e-18 | 98 |
bone element | 1.33e-17 | 82 |
hemolymphoid system | 2.41e-16 | 108 |
skeletal element | 8.93e-16 | 90 |
immune system | 3.60e-15 | 93 |
skeletal system | 6.72e-14 | 100 |
connective tissue | 3.23e-09 | 371 |
musculoskeletal system | 4.16e-07 | 167 |
lateral plate mesoderm | 4.42e-07 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.