FFCP PHASE1:Hg19::chr10:98031360..98031369,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=29760|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14211|TSSclassifier=S|UniProt=E7EP07,F5H3H9,Q2MD49,F5GXS1,Q2MD46,F5GZV1,Q8WV28|association_with_transcript=-27bp_to_ENST00000393889,ENST00000393894,ENST00000393898,ENST00000413476,ENST00000427367,ENST00000428924,ENST00000537049,NM_001114094,NM_013314,uc001kls.3,uc001klt.3,uc001klu.3,uc001klv.3,uc001klw.3,uc001klx.3,uc001kly.3,uc001klz.3,uc001kma.3,uc001kmb.3,uc001kmc.3,uc001kmd.3,uc001kme.3,uc009xvc.2,uc009xvd.2_5end|description=CAGE_peak_5_at_BLNK_5end|id=chr10:98031360..98031369,-|ontology_enrichment_celltype=CL:0000945!3.25e-22!24;CL:0000826!3.25e-22!24;CL:0000542!1.42e-08!53;CL:0000051!1.42e-08!53;CL:0000838!9.52e-08!52;CL:0000817!1.76e-07!3;CL:0000236!6.33e-07!14|ontology_enrichment_celltype_v019=CL:0000945;2.70e-14;24!CL:0000817;2.07e-11;1!CL:0000182;2.70e-08;12!CL:0000236;2.22e-07;13|ontology_enrichment_celltype_v019_2=CL:0000945,2.51e-14,24;CL:0000826,2.51e-14,24;CL:0000182,2.67e-08,12;CL:0000236,6.57e-07,14|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0060058!3.39e-07!10|ontology_enrichment_disease_v019=DOID:0060058;2.34e-09;10|ontology_enrichment_disease_v019_2=DOID:0060058,2.31e-09,10|ontology_enrichment_uberon=UBERON:0005409!3.21e-07!35|ontology_enrichment_uberon_v019=UBERON:0002108;7.84e-19;4!UBERON:0005409;1.99e-15;22!UBERON:0000160;5.59e-14;17!UBERON:0004921;2.03e-09;33!UBERON:0002107;8.79e-09;19!UBERON:0006925;8.79e-09;19|ontology_enrichment_uberon_v019_2=UBERON:0002108,7.16e-19,4;UBERON:0000160,5.51e-14,17;UBERON:0005409,1.30e-13,25;UBERON:0002107,9.35e-09,19;UBERON:0006925,9.35e-09,19;UBERON:0008836,9.35e-09,19;UBERON:0008835,1.40e-07,22;UBERON:0003894,1.40e-07,22;UBERON:0009854,2.94e-07,23;UBERON:0004921,4.71e-07,118|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.903106483949403,0.472264687882075,0,0.383829398097213,0,0,0,0,1.16200800870452,1.27952309238679,0.293600439334847,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659702600373432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77901850772711,0,0.400395987036012,0.574752439954483,1.32208974556972,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87285243752816,3.9313088667105,4.13552934676983,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.702012795417713,0.743155811443641,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.371606350251437,2.01976898167023,0,0,0,0,0,0,0,2.28234679033192,0,0,0,0.481764225311099,0,0.425846237690326,0,0,0.223676107892416,0,1.17232857241224,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.552567831062295,0.251932747854276,0,0.369254416383208,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12298154808014,3.05515072466813,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0.85381197895741,0,0.576361668616424,0,0.343189995723929,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0,0,0,0.449947783103001,0,0,0,0.630445658393585,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02586563574658,0,0,0,0,0,0,0,0.414239055347196,0.496166021811951,0.592834895693833,1.33971858218986,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,8.83251544014037,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.447421727191169,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0,4.3217528540449,2.84127428655144,0,0,0,0,0,0,0,0.281951753939561,0.257831551894309,0.299823467774787,0,0,0.0802413666891683,2.19100916473955,0.458729283404541,0,0,0.135982980381829,0.436350690340377,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0.0645889098360061,0,0,0,0.202117188958219,0.217716747896961,0,0.606168477131288,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.961705476909699|short_description=p5@BLNK}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=29760 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14211 | |||
|TSSclassifier=S | |||
|UniProt=E7EP07,F5H3H9,Q2MD49,F5GXS1,Q2MD46,F5GZV1,Q8WV28 | |||
|association_with_transcript=-27bp_to_ENST00000393889,ENST00000393894,ENST00000393898,ENST00000413476,ENST00000427367,ENST00000428924,ENST00000537049,NM_001114094,NM_013314,uc001kls.3,uc001klt.3,uc001klu.3,uc001klv.3,uc001klw.3,uc001klx.3,uc001kly.3,uc001klz.3,uc001kma.3,uc001kmb.3,uc001kmc.3,uc001kmd.3,uc001kme.3,uc009xvc.2,uc009xvd.2_5end | |||
|description=CAGE_peak_5_at_BLNK_5end | |||
|id=chr10:98031360..98031369,- | |||
|ontology_enrichment_celltype=CL:0000945!3.25e-22!24;CL:0000826!3.25e-22!24;CL:0000542!1.42e-08!53;CL:0000051!1.42e-08!53;CL:0000838!9.52e-08!52;CL:0000817!1.76e-07!3;CL:0000236!6.33e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.70e-14;24!CL:0000817;2.07e-11;1!CL:0000182;2.70e-08;12!CL:0000236;2.22e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.51e-14,24;CL:0000826,2.51e-14,24;CL:0000182,2.67e-08,12;CL:0000236,6.57e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!3.39e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.34e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.31e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0005409!3.21e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;7.84e-19;4!UBERON:0005409;1.99e-15;22!UBERON:0000160;5.59e-14;17!UBERON:0004921;2.03e-09;33!UBERON:0002107;8.79e-09;19!UBERON:0006925;8.79e-09;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,7.16e-19,4;UBERON:0000160,5.51e-14,17;UBERON:0005409,1.30e-13,25;UBERON:0002107,9.35e-09,19;UBERON:0006925,9.35e-09,19;UBERON:0008836,9.35e-09,19;UBERON:0008835,1.40e-07,22;UBERON:0003894,1.40e-07,22;UBERON:0009854,2.94e-07,23;UBERON:0004921,4.71e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.903106483949403,0.472264687882075,0,0.383829398097213,0,0,0,0,1.16200800870452,1.27952309238679,0.293600439334847,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659702600373432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77901850772711,0,0.400395987036012,0.574752439954483,1.32208974556972,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87285243752816,3.9313088667105,4.13552934676983,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.702012795417713,0.743155811443641,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.371606350251437,2.01976898167023,0,0,0,0,0,0,0,2.28234679033192,0,0,0,0.481764225311099,0,0.425846237690326,0,0,0.223676107892416,0,1.17232857241224,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.552567831062295,0.251932747854276,0,0.369254416383208,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12298154808014,3.05515072466813,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0.85381197895741,0,0.576361668616424,0,0.343189995723929,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0,0,0,0.449947783103001,0,0,0,0.630445658393585,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02586563574658,0,0,0,0,0,0,0,0.414239055347196,0.496166021811951,0.592834895693833,1.33971858218986,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,8.83251544014037,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.447421727191169,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0,4.3217528540449,2.84127428655144,0,0,0,0,0,0,0,0.281951753939561,0.257831551894309,0.299823467774787,0,0,0.0802413666891683,2.19100916473955,0.458729283404541,0,0,0.135982980381829,0.436350690340377,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0.0645889098360061,0,0,0,0.202117188958219,0.217716747896961,0,0.606168477131288,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |||
|short_description=p5@BLNK | |||
}} |
Revision as of 15:10, 10 September 2013
Short description: | p5@BLNK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_BLNK_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_ENST00000393889, ENST00000393894, ENST00000393898, ENST00000413476, ENST00000427367, ENST00000428924, ENST00000537049, NM_001114094, NM_013314, uc001kls.3, uc001klt.3, uc001klu.3, uc001klv.3, uc001klw.3, uc001klx.3, uc001kly.3, uc001klz.3, uc001kma.3, uc001kmb.3, u |
EntrezGene: | BLNK |
HGNC: | 14211 |
UniProt: | E7EP07F5H3H9Q2MD49F5GXS1Q2MD46F5GZV1Q8WV28 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.51e-14 | 24 |
pro-B cell | 2.51e-14 | 24 |
hepatocyte | 2.67e-08 | 12 |
B cell | 6.57e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
small intestine | 7.16e-19 | 4 |
intestine | 5.51e-14 | 17 |
gastrointestinal system | 1.30e-13 | 25 |
liver | 9.35e-09 | 19 |
digestive gland | 9.35e-09 | 19 |
liver bud | 9.35e-09 | 19 |
hepatic diverticulum | 1.40e-07 | 22 |
liver primordium | 1.40e-07 | 22 |
digestive tract diverticulum | 2.94e-07 | 23 |
subdivision of digestive tract | 4.71e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.31e-09 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.