FFCP PHASE1:Hg19::chr10:95196850..95196873,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr10:95196850..95196873,-|id=chr10:95196850..95196873,-|ontology_enrichment_celltype=CL:0002057!6.41e-28!42;CL:0000860!9.34e-28!45;CL:0002009!2.36e-21!65;CL:0002194!3.97e-20!63;CL:0000576!3.97e-20!63;CL:0000040!3.97e-20!63;CL:0000559!3.97e-20!63;CL:0000557!9.78e-19!71;CL:0000766!3.72e-17!76;CL:0000839!5.41e-17!70;CL:0000012!5.23e-10!682;CL:0000548!1.49e-09!679;CL:0000004!1.49e-09!679;CL:0000255!1.49e-09!679;CL:0000063!1.77e-09!578;CL:0000144!3.24e-09!625;CL:0002371!3.51e-09!591;CL:0002320!5.81e-08!365;CL:0000134!5.85e-08!358;CL:0000763!1.45e-07!112;CL:0000049!1.45e-07!112;CL:0000048!2.86e-07!430;CL:0000034!5.93e-07!444;CL:0000723!9.93e-07!436|ontology_enrichment_celltype_v019=CL:0000860;1.33e-61;33!CL:0002057;1.33e-61;33!CL:0000473;5.22e-42;39!CL:0000234;5.22e-42;39!CL:0000576;4.13e-40;48!CL:0000766;2.72e-24;69!CL:0002393;8.78e-16;6!CL:0002397;8.78e-16;6!CL:0002087;1.59e-11;104!CL:0000763;8.03e-11;100!CL:0000767;5.64e-09;3!CL:0000738;1.89e-08;136!CL:0000226;3.71e-08;3!CL:0000842;3.71e-08;3!CL:0000784;1.42e-07;3|ontology_enrichment_celltype_v019_2=CL:0000860,1.42e-75,42;CL:0002057,1.42e-75,42;CL:0000473,9.57e-65,48;CL:0000234,9.57e-65,48;CL:0002009,2.78e-56,61;CL:0002194,2.08e-52,59;CL:0000576,2.08e-52,59;CL:0000040,2.08e-52,59;CL:0000559,2.08e-52,59;CL:0000557,2.75e-50,67;CL:0000766,3.29e-49,72;CL:0000839,9.06e-46,66;CL:0000763,1.52e-32,108;CL:0000049,1.52e-32,108;CL:0000738,1.66e-32,136;CL:0002087,5.01e-28,115;CL:0002031,9.05e-25,120;CL:0000037,7.58e-24,168;CL:0000988,5.56e-22,177;CL:0002032,3.44e-19,161;CL:0000837,3.44e-19,161;CL:0000134,6.45e-16,354;CL:0002320,2.68e-15,361;CL:0000048,1.31e-14,427;CL:0000034,2.21e-14,441;CL:0000723,3.58e-14,433;CL:0000219,3.96e-13,386;CL:0002393,3.78e-10,9;CL:0002397,3.78e-10,9;CL:0000767,5.52e-09,3;CL:0000226,2.66e-08,3;CL:0000842,2.66e-08,3;CL:0000784,1.16e-07,3|ontology_enrichment_development_v019=CL:0002057;4.53e-56;42!CL:0000049;4.82e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001474!9.16e-18!86;UBERON:0002371!4.54e-17!80;UBERON:0004765!1.10e-12!101;UBERON:0001434!1.10e-12!101;UBERON:0002390!1.95e-12!102;UBERON:0003061!1.95e-12!102;UBERON:0002193!2.90e-10!112;UBERON:0003081!3.06e-10!216;UBERON:0002405!3.10e-10!115;UBERON:0002204!1.42e-08!167;UBERON:0002384!1.55e-07!375;UBERON:0000926!2.88e-07!448;UBERON:0004120!2.88e-07!448;UBERON:0006603!2.88e-07!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.68e-43,76;UBERON:0001474,4.12e-39,82;UBERON:0002390,8.88e-37,98;UBERON:0003061,8.88e-37,98;UBERON:0004765,1.14e-34,90;UBERON:0002405,3.37e-33,93;UBERON:0002193,2.70e-32,108;UBERON:0001434,4.10e-30,100;UBERON:0002204,5.73e-20,167;UBERON:0003081,3.18e-18,203;UBERON:0002384,1.86e-14,371;UBERON:0000926,9.79e-12,315;UBERON:0004120,9.79e-12,315;UBERON:0006603,9.79e-12,315|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0.261185628199839,0.491467873003018,0.697801167972428,0.218441372130172,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,27.1421351025744,16.5046641181801,21.9838895108828,0,0,1.10926203050036,0,0,0.293600439334847,64.2634673896978,39.5072561516179,39.495978470285,0,0,0,2.61716829803216,1.51150377475524,0.970336244751265,9.99444858694444,7.81218987241469,9.29119112685311,39.1261653558125,33.5570525553122,49.6612682766029,106.526415347615,32.2742341791913,55.5248595036801,5.83551252582075,3.27487380069415,10.562003768919,104.98677508322,54.5579346029359,86.3105119828706,8.90598510504134,11.5688921420546,5.54092175692502,47.5943151350878,21.5606385382633,24.2900677108274,25.1248665256743,17.7304192262868,36.4877259104596,21.1889825921679,31.303599058943,37.9754864929061,1.05627643155971,3.61427309940574,2.72556239160889,2.69588714751588,0.901061357049038,0.48217676009124,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0.569212969109448,2.34894875748376,0,0,5.60508562981536,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,0,0.50133791063589,0,0,0.486634870302636,0.378139268656271,0,0.175669571386252,0,0,0.370784442784429,0.324547393654683,0,0.132957960518865,1.19245312152671,1.71598473234038,1.48583000531826,0.39752481473341,0.860234595106124,0,0,0,0,0.417989933073621,0,0,0,0,0,0.488124115096339,0.367663080345869,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0.549605231791222,0,0,0.436094052142534,0,0.759783069987479,0.794455084879313,0.286836620748814,0.709336764396714,0.560677600142307,0,0,0,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0,0,0.149448680551801,0,0.1618729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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:95196850..95196873,- | |||
|id=chr10:95196850..95196873,- | |||
|ontology_enrichment_celltype=CL:0002057!6.41e-28!42;CL:0000860!9.34e-28!45;CL:0002009!2.36e-21!65;CL:0002194!3.97e-20!63;CL:0000576!3.97e-20!63;CL:0000040!3.97e-20!63;CL:0000559!3.97e-20!63;CL:0000557!9.78e-19!71;CL:0000766!3.72e-17!76;CL:0000839!5.41e-17!70;CL:0000012!5.23e-10!682;CL:0000548!1.49e-09!679;CL:0000004!1.49e-09!679;CL:0000255!1.49e-09!679;CL:0000063!1.77e-09!578;CL:0000144!3.24e-09!625;CL:0002371!3.51e-09!591;CL:0002320!5.81e-08!365;CL:0000134!5.85e-08!358;CL:0000763!1.45e-07!112;CL:0000049!1.45e-07!112;CL:0000048!2.86e-07!430;CL:0000034!5.93e-07!444;CL:0000723!9.93e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.33e-61;33!CL:0002057;1.33e-61;33!CL:0000473;5.22e-42;39!CL:0000234;5.22e-42;39!CL:0000576;4.13e-40;48!CL:0000766;2.72e-24;69!CL:0002393;8.78e-16;6!CL:0002397;8.78e-16;6!CL:0002087;1.59e-11;104!CL:0000763;8.03e-11;100!CL:0000767;5.64e-09;3!CL:0000738;1.89e-08;136!CL:0000226;3.71e-08;3!CL:0000842;3.71e-08;3!CL:0000784;1.42e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.42e-75,42;CL:0002057,1.42e-75,42;CL:0000473,9.57e-65,48;CL:0000234,9.57e-65,48;CL:0002009,2.78e-56,61;CL:0002194,2.08e-52,59;CL:0000576,2.08e-52,59;CL:0000040,2.08e-52,59;CL:0000559,2.08e-52,59;CL:0000557,2.75e-50,67;CL:0000766,3.29e-49,72;CL:0000839,9.06e-46,66;CL:0000763,1.52e-32,108;CL:0000049,1.52e-32,108;CL:0000738,1.66e-32,136;CL:0002087,5.01e-28,115;CL:0002031,9.05e-25,120;CL:0000037,7.58e-24,168;CL:0000988,5.56e-22,177;CL:0002032,3.44e-19,161;CL:0000837,3.44e-19,161;CL:0000134,6.45e-16,354;CL:0002320,2.68e-15,361;CL:0000048,1.31e-14,427;CL:0000034,2.21e-14,441;CL:0000723,3.58e-14,433;CL:0000219,3.96e-13,386;CL:0002393,3.78e-10,9;CL:0002397,3.78e-10,9;CL:0000767,5.52e-09,3;CL:0000226,2.66e-08,3;CL:0000842,2.66e-08,3;CL:0000784,1.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.53e-56;42!CL:0000049;4.82e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!9.16e-18!86;UBERON:0002371!4.54e-17!80;UBERON:0004765!1.10e-12!101;UBERON:0001434!1.10e-12!101;UBERON:0002390!1.95e-12!102;UBERON:0003061!1.95e-12!102;UBERON:0002193!2.90e-10!112;UBERON:0003081!3.06e-10!216;UBERON:0002405!3.10e-10!115;UBERON:0002204!1.42e-08!167;UBERON:0002384!1.55e-07!375;UBERON:0000926!2.88e-07!448;UBERON:0004120!2.88e-07!448;UBERON:0006603!2.88e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.68e-43,76;UBERON:0001474,4.12e-39,82;UBERON:0002390,8.88e-37,98;UBERON:0003061,8.88e-37,98;UBERON:0004765,1.14e-34,90;UBERON:0002405,3.37e-33,93;UBERON:0002193,2.70e-32,108;UBERON:0001434,4.10e-30,100;UBERON:0002204,5.73e-20,167;UBERON:0003081,3.18e-18,203;UBERON:0002384,1.86e-14,371;UBERON:0000926,9.79e-12,315;UBERON:0004120,9.79e-12,315;UBERON:0006603,9.79e-12,315 | |||
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| |||
|short_description=p@chr10:95196850..95196873,- | |||
}} |
Revision as of 15:02, 10 September 2013
Short description: | p@chr10:95196850..95196873, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:95196850..95196873, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.68e-43 | 76 |
bone element | 4.12e-39 | 82 |
hematopoietic system | 8.88e-37 | 98 |
blood island | 8.88e-37 | 98 |
skeletal element | 1.14e-34 | 90 |
immune system | 3.37e-33 | 93 |
hemolymphoid system | 2.70e-32 | 108 |
skeletal system | 4.10e-30 | 100 |
musculoskeletal system | 5.73e-20 | 167 |
lateral plate mesoderm | 3.18e-18 | 203 |
connective tissue | 1.86e-14 | 371 |
mesoderm | 9.79e-12 | 315 |
mesoderm-derived structure | 9.79e-12 | 315 |
presumptive mesoderm | 9.79e-12 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.