FFCP PHASE1:Hg19::chr10:94833710..94833721,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1592|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2603|TSSclassifier=S|UniProt=Q5VXH9|association_with_transcript=63bp_to_ENST00000394139_5end|coexpression_cluster_id=C49|description=CAGE_peak_2_at_CYP26A1_5end|id=chr10:94833710..94833721,+|ontology_enrichment_celltype=CL:0002322!1.11e-23!5;CL:0000147!6.39e-08!14;CL:0000540!1.88e-07!6;CL:0000031!1.88e-07!6;CL:0000404!1.88e-07!6|ontology_enrichment_celltype_v019=CL:0002322;1.00e-57;5!CL:0002321;1.32e-19;15!CL:0000785;3.56e-19;1!CL:0000819;3.56e-19;1!CL:0000148;3.56e-08;10|ontology_enrichment_celltype_v019_2=CL:0002322,5.58e-58,5;CL:0000819,4.69e-19,1;CL:0000785,3.27e-10,2;CL:0000955,3.27e-10,2;CL:0000818,3.27e-10,2;CL:0000954,3.27e-10,2;CL:0000816,3.27e-10,2;CL:0000148,3.25e-08,10;CL:0000541,3.25e-08,10;CL:0000817,3.16e-07,3|ontology_enrichment_development_v019=CL:0000954;2.85e-10;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060073;3.56e-19;1!DOID:8675;3.56e-19;1|ontology_enrichment_disease_v019_2=DOID:0060073,4.69e-19,1;DOID:8675,4.69e-19,1|ontology_enrichment_uberon=UBERON:0001950!9.32e-12!20;UBERON:0002619!1.25e-10!22;UBERON:0000956!2.92e-09!25;UBERON:0000203!2.92e-09!25;UBERON:0003056!7.29e-09!61;UBERON:0001869!7.34e-09!32;UBERON:0002791!1.48e-08!33;UBERON:0002020!2.87e-08!34;UBERON:0003528!2.87e-08!34;UBERON:0001893!2.87e-08!34;UBERON:0002780!3.40e-08!41;UBERON:0001890!3.40e-08!41;UBERON:0006240!3.40e-08!41;UBERON:0003080!5.80e-08!42;UBERON:0003075!8.60e-08!86;UBERON:0007284!8.60e-08!86;UBERON:0002346!2.57e-07!90;UBERON:0002369!5.83e-07!3;UBERON:0001235!5.83e-07!3;UBERON:0006858!5.83e-07!3|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46368447355514,4.5060121229305,3.137236457477,0.621966330092223,1.7662459561294,6.20461510428911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.094728735294,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,3.05430982083536,0.550157746388935,0.415440338029185,0,0,0.303747783290123,0,0,0,0,0,0,0,0,1.017074150619,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0.926404341482917,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.203974470572744,0.436350690340377,0,0,0,0,3.28032704571205,0.218531143927391,0.633492505057185,0,0,0.0918948995348449,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@CYP26A1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1592 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2603 | |||
|TSSclassifier=S | |||
|UniProt=Q5VXH9 | |||
|association_with_transcript=63bp_to_ENST00000394139_5end | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_2_at_CYP26A1_5end | |||
|id=chr10:94833710..94833721,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.11e-23!5;CL:0000147!6.39e-08!14;CL:0000540!1.88e-07!6;CL:0000031!1.88e-07!6;CL:0000404!1.88e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.00e-57;5!CL:0002321;1.32e-19;15!CL:0000785;3.56e-19;1!CL:0000819;3.56e-19;1!CL:0000148;3.56e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.58e-58,5;CL:0000819,4.69e-19,1;CL:0000785,3.27e-10,2;CL:0000955,3.27e-10,2;CL:0000818,3.27e-10,2;CL:0000954,3.27e-10,2;CL:0000816,3.27e-10,2;CL:0000148,3.25e-08,10;CL:0000541,3.25e-08,10;CL:0000817,3.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000954;2.85e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;3.56e-19;1!DOID:8675;3.56e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,4.69e-19,1;DOID:8675,4.69e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0001950!9.32e-12!20;UBERON:0002619!1.25e-10!22;UBERON:0000956!2.92e-09!25;UBERON:0000203!2.92e-09!25;UBERON:0003056!7.29e-09!61;UBERON:0001869!7.34e-09!32;UBERON:0002791!1.48e-08!33;UBERON:0002020!2.87e-08!34;UBERON:0003528!2.87e-08!34;UBERON:0001893!2.87e-08!34;UBERON:0002780!3.40e-08!41;UBERON:0001890!3.40e-08!41;UBERON:0006240!3.40e-08!41;UBERON:0003080!5.80e-08!42;UBERON:0003075!8.60e-08!86;UBERON:0007284!8.60e-08!86;UBERON:0002346!2.57e-07!90;UBERON:0002369!5.83e-07!3;UBERON:0001235!5.83e-07!3;UBERON:0006858!5.83e-07!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46368447355514,4.5060121229305,3.137236457477,0.621966330092223,1.7662459561294,6.20461510428911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.094728735294,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,3.05430982083536,0.550157746388935,0.415440338029185,0,0,0.303747783290123,0,0,0,0,0,0,0,0,1.017074150619,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0.926404341482917,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.203974470572744,0.436350690340377,0,0,0,0,3.28032704571205,0.218531143927391,0.633492505057185,0,0,0.0918948995348449,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@CYP26A1 | |||
}} |
Revision as of 15:02, 10 September 2013
Short description: | p2@CYP26A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CYP26A1_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 63bp_to_ENST00000394139_5end |
EntrezGene: | CYP26A1 |
HGNC: | 2603 |
UniProt: | Q5VXH9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.58e-58 | 5 |
B-1 B cell | 4.69e-19 | 1 |
mature B cell | 3.27e-10 | 2 |
pre-B-II cell | 3.27e-10 | 2 |
transitional stage B cell | 3.27e-10 | 2 |
small pre-B-II cell | 3.27e-10 | 2 |
immature B cell | 3.27e-10 | 2 |
melanocyte | 3.25e-08 | 10 |
melanoblast | 3.25e-08 | 10 |
precursor B cell | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 4.69e-19 | 1 |
lymphosarcoma | 4.69e-19 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.