FFCP PHASE1:Hg19::chr10:64028377..64028388,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=219790|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19364|TSSclassifier=S|UniProt=Q8IZC4|association_with_transcript=77bp_to_ENST00000373789,ENST00000395260,ENST00000395265,NM_145307,uc001jlw.2,uc001jlx.2_5end|coexpression_cluster_id=C3033|description=CAGE_peak_5_at_RTKN2_5end|id=chr10:64028377..64028388,-|ontology_enrichment_celltype=CL:0000133!3.96e-10!59;CL:0000221!3.07e-07!71|ontology_enrichment_celltype_v019=CL:0002322;3.43e-14;5!CL:0002321;4.42e-14;15!CL:0002605;4.46e-10;3!CL:0000333;9.56e-10;5!CL:0000128;1.91e-07;7!CL:0000126;1.91e-07;7!CL:0000127;1.91e-07;7!CL:0002319;1.95e-07;25|ontology_enrichment_celltype_v019_2=CL:0002322,2.24e-15,5;CL:0000133,1.08e-12,59;CL:0000333,4.73e-12,41;CL:0002605,2.83e-10,3;CL:0000221,1.21e-09,72;CL:0002319,1.33e-07,25;CL:0000128,1.42e-07,7;CL:0000126,1.42e-07,7;CL:0000127,1.42e-07,7;CL:0002453,1.42e-07,7|ontology_enrichment_development_v019=CL:0000133;3.88e-08;59|ontology_enrichment_disease=DOID:162!1.71e-21!235;DOID:14566!3.83e-20!239;DOID:0050687!1.89e-15!143;DOID:305!4.56e-15!106;DOID:0050686!2.02e-08!137;DOID:3119!4.10e-08!14|ontology_enrichment_disease_v019=DOID:169;4.04e-08;6|ontology_enrichment_disease_v019_2=DOID:169,6.25e-08,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000013;9.56e-10;5!UBERON:0002410;9.56e-10;5|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.63e-09,5;UBERON:0002410,1.63e-09,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0,0,3.14859585844162,1.64249310087461,2.13422487311165,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0.822335776043652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0.473447805734733,0,0.222820913770347,0,0,0,0,0,0.328875809207352,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,1.03988298880475,0.665188192387692,0.790513071238134,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.337834441449967,0,0,0,0,0,0,0.496971951695318,0.886413581652058,0.264818361626438,1.43418310374407,1.06400514659507,0,0,0.24666754841716,0.622422070799533,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0.336672227908132,0,0.277064115484183,0,0.30648779579902,0,0.113432183160021,0.538168907066586,0.213557388818567,0,0.300091096084402,0,0,0,0.337552664482532,0,0,0,0,0,0.302256294682921,0,0.193260853163297,0,0,1.70763188581434,1.98794652482228,1.62671520017326,1.34759371519982,1.7662459561294,1.45990943630332,0,0,0,0,0,0.236613600079688,1.18009283054671,0,0.330881918197182,0.435758888184812,0,0.134831308160164,0.784885860501384,0,0,0,0,0,0,0,0,0,1.47586126251736,0,0,0,0,0,0,0,0,0.695582429850461,0,0,0,0,0,0,0,0,0.297262324577456,0,0.16798212819886,0.141775097242386,0.268675568108545,0.290633938513962,0,0,0.176096868026452,0,0,0,0.888970520090367,0,0,0,0.616964956219941,1.20137223137567,0.285826432630578,0.224262168690721,0,0.22001485746285,0.129271715757778,0,0,1.32969058292435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.537182889719687,0,0,0,0,0.254094624222463,0,2.31986643833309,0.335032530668698,0,0,0,0,0,0,0,0.415941723061614,0.713715955188647,0.473107245101804,0.468565659970853,0,0,0,1.32845119707087,0.553107505625109,0.781952530212746,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.887808626565635,0.492762936082855,0,0.348631135379878,1.45031339509947,0,0,0.68888668898764,2.00300284807389,0.655622074797121,0,0.539107359730903,0,0,0.422206515571503,0,0,0,0,0.541892875087706,0,0,0,0.447749509444357,0,0,0,0,0,0,1.46511143709349,0.907604499126468,0,0,0,0,0,0,0,0.322260734604821,0,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,1.2655176988749,0,0,0,0,0,0.179872457583315,0,0.353437207037059,0.202182481573316,0,0.421258456238981,0,0.487426979262569,0,1.22849920267187,0.282810863907425,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,1.06428319221179,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,2.88743956579008,1.71528151186722,0.557409525377156,1.00988449083511,3.84165954081436,0.956557636372934,0,0,0.635020748171649,0.324621940274555,0.842391534340376,0,0,0,0,0,0,0,1.03051603426729,0,0,0.333698283423817,0,0.278406173895242,1.23087398947712,1.35227839237992,1.6653598399891,0,0.18714054040822,0,0.121360521749513,0.445773537109913,0.284136146806413,0,0.593929361665277,0,0,0,0.111308705022906,0,1.26675244876796,0,0,0.503865495708552,3.88620993508188,0,0,0.988551862620595,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0.1137934482855,0.254253650292766,0,0.344743373241465,0.291604613383254,1.38899995946634,0,0,0,0,0,0,0.21787692703798,3.76444109552229,0,0.341826167541004,0,0.269272933229316,0.325942115766024,0,0.641183153813036,0,0,0.3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=219790 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19364 | |||
|TSSclassifier=S | |||
|UniProt=Q8IZC4 | |||
|association_with_transcript=77bp_to_ENST00000373789,ENST00000395260,ENST00000395265,NM_145307,uc001jlw.2,uc001jlx.2_5end | |||
|coexpression_cluster_id=C3033 | |||
|description=CAGE_peak_5_at_RTKN2_5end | |||
|id=chr10:64028377..64028388,- | |||
|ontology_enrichment_celltype=CL:0000133!3.96e-10!59;CL:0000221!3.07e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.43e-14;5!CL:0002321;4.42e-14;15!CL:0002605;4.46e-10;3!CL:0000333;9.56e-10;5!CL:0000128;1.91e-07;7!CL:0000126;1.91e-07;7!CL:0000127;1.91e-07;7!CL:0002319;1.95e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.24e-15,5;CL:0000133,1.08e-12,59;CL:0000333,4.73e-12,41;CL:0002605,2.83e-10,3;CL:0000221,1.21e-09,72;CL:0002319,1.33e-07,25;CL:0000128,1.42e-07,7;CL:0000126,1.42e-07,7;CL:0000127,1.42e-07,7;CL:0002453,1.42e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000133;3.88e-08;59 | |||
|ontology_enrichment_disease=DOID:162!1.71e-21!235;DOID:14566!3.83e-20!239;DOID:0050687!1.89e-15!143;DOID:305!4.56e-15!106;DOID:0050686!2.02e-08!137;DOID:3119!4.10e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:169;4.04e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,6.25e-08,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;9.56e-10;5!UBERON:0002410;9.56e-10;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.63e-09,5;UBERON:0002410,1.63e-09,5 | |||
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| |||
|short_description=p5@RTKN2 | |||
}} |
Revision as of 13:54, 10 September 2013
Short description: | p5@RTKN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_RTKN2_5end |
Coexpression cluster: | C3033_non_colon_hepatoblastoma_astrocytoma_prostate_rhabdomyosarcoma_acute |
Association with transcript: | 77bp_to_ENST00000373789, ENST00000395260, ENST00000395265, NM_145307, uc001jlw.2, uc001jlx.2_5end |
EntrezGene: | RTKN2 |
HGNC: | 19364 |
UniProt: | Q8IZC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.24e-15 | 5 |
neurectodermal cell | 1.08e-12 | 59 |
migratory neural crest cell | 4.73e-12 | 41 |
astrocyte of the cerebral cortex | 2.83e-10 | 3 |
ectodermal cell | 1.21e-09 | 72 |
neural cell | 1.33e-07 | 25 |
oligodendrocyte | 1.42e-07 | 7 |
macroglial cell | 1.42e-07 | 7 |
astrocyte | 1.42e-07 | 7 |
oligodendrocyte precursor cell | 1.42e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.63e-09 | 5 |
autonomic nervous system | 1.63e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 6.25e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.