FFCP PHASE1:Hg19::chr10:47083454..47083472,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5540|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9329|TSSclassifier=W|UniProt=P50391|association_with_transcript=-61bp_to_ENST00000374312,NM_005972,uc001jee.2,uc009xna.2_5end|description=CAGE_peak_1_at_PPYR1_5end|id=chr10:47083454..47083472,+|ontology_enrichment_celltype=CL:0000055!2.00e-07!180|ontology_enrichment_celltype_v019=CL:0002334;1.69e-11;12!CL:0002579;6.74e-10;3!CL:0000064;1.19e-09;3!CL:0000067;1.19e-09;3!CL:0005012;1.19e-09;3!CL:0002304;1.19e-09;3!CL:0002580;1.94e-09;3!CL:0000708;2.64e-09;3!CL:0002549;4.94e-07;2|ontology_enrichment_celltype_v019_2=CL:0002334,1.01e-11,12;CL:0002579,5.31e-10,3;CL:0002580,9.70e-10,3;CL:0000708,1.52e-09,3;CL:0000064,1.66e-09,3;CL:0000067,1.66e-09,3;CL:0005012,1.66e-09,3;CL:0002304,1.66e-09,3;CL:0002549,6.11e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!6.68e-08!14|ontology_enrichment_disease_v019=DOID:2394;3.17e-10;14|ontology_enrichment_disease_v019_2=DOID:2394,3.07e-10,14|ontology_enrichment_uberon=UBERON:0000119!1.68e-07!312;UBERON:0000481!3.65e-07!347;UBERON:0002118!3.97e-07!5;UBERON:0004532!3.97e-07!5|ontology_enrichment_uberon_v019=UBERON:0007625;1.90e-12;11!UBERON:0000488;2.50e-12;4!UBERON:0002118;3.16e-10;5!UBERON:0000310;1.00e-09;10!UBERON:0001778;1.19e-09;3!UBERON:0001775;1.19e-09;3!UBERON:0006876;2.61e-09;11!UBERON:0003210;2.64e-09;3!UBERON:0001443;8.80e-09;11!UBERON:0003688;1.82e-08;6!UBERON:0002358;1.82e-08;6!UBERON:0003684;1.82e-08;6!UBERON:0001178;1.82e-08;6!UBERON:0004457;3.17e-08;9!UBERON:0000042;3.17e-08;9!UBERON:0002203;3.19e-08;6!UBERON:0001768;3.19e-08;6!UBERON:0002200;3.19e-08;6!UBERON:0000160;1.34e-07;17!UBERON:0005406;1.63e-07;2!UBERON:0001801;3.33e-07;14!UBERON:0005629;4.94e-07;2!UBERON:0005358;4.94e-07;2!UBERON:0001886;4.94e-07;2!UBERON:0004086;4.94e-07;2!UBERON:0005282;4.94e-07;2!UBERON:0005281;4.94e-07;2!UBERON:0000019;9.17e-07;19!UBERON:0000047;9.17e-07;19!UBERON:0004088;9.17e-07;19!UBERON:0010230;9.17e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0007625,2.50e-12,11;UBERON:0000488,2.91e-12,4;UBERON:0002118,2.62e-10,5;UBERON:0000310,8.52e-10,10;UBERON:0003210,1.52e-09,3;UBERON:0001778,1.66e-09,3;UBERON:0001775,1.66e-09,3;UBERON:0006876,3.14e-09,11;UBERON:0001443,7.62e-09,11;UBERON:0003688,1.50e-08,6;UBERON:0002358,1.50e-08,6;UBERON:0003684,1.50e-08,6;UBERON:0001178,1.50e-08,6;UBERON:0002203,3.52e-08,6;UBERON:0001768,3.52e-08,6;UBERON:0002200,3.52e-08,6;UBERON:0000160,1.49e-07,17;UBERON:0005406,1.74e-07,2;UBERON:0001801,3.65e-07,14;UBERON:0005629,6.11e-07,2;UBERON:0005358,6.11e-07,2;UBERON:0001886,6.11e-07,2;UBERON:0004086,6.11e-07,2;UBERON:0005282,6.11e-07,2;UBERON:0005281,6.11e-07,2|phase1_expression=1.2717486548939,1.49870366723688,3.66481450649525,0,0.893922188854576,5.23403114460221,0,0,0,0.982935746006035,0,0,0,0,0,0,0,0,0,0.369363174230364,1.42800483870977,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0.289693037921647,0,0,1.03988298880475,2.4390233720882,4.56740885604255,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.633152558322899,0,0.573673241497627,0.709336764396714,2.24271040056923,0,0,0,0.134710672069688,0.163461903113459,2.11900398702904,2.30470369792,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,1.77810662500693,0,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3504621473082,5.88034845542168,0,1.96565443335525,0,0,0,2.91665277507493,0,0,0,0,0,0,1.44331342025273,0.231860809950154,14.9109041679494,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79409734952577,3.48768055066624,1.98013371716565,1.03417372606222,0,0,0,0,0,0,0,1.28680194292333,0,1.64648067356154,0,0.710783897485092,0.791951872933429,4.52159065589379,1.74306691720059,3.59902768255405,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0,0.630809660135739,0.937131319941706,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,1.98486246255021,1.84154367945675,5.89386198309454,6.15067916427365,3.07024349440022,1.93024705372329,4.45254199334973,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0.451199612907412,0.385076685522074,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,1.31205858279882,0,0,0,0,0,0,12.8547143875328,0,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,3.71876439437829,2.51849877464512,0,0,0,0,0,0.572499546967965,0.372158369359667,0,0.38126038784765,0.255897791311334,0,0,1.56989728039846,0.359744915166629,0,0,0,0,0.842516912477962,0.4876337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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5540 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9329 | |||
|TSSclassifier=W | |||
|UniProt=P50391 | |||
|association_with_transcript=-61bp_to_ENST00000374312,NM_005972,uc001jee.2,uc009xna.2_5end | |||
|description=CAGE_peak_1_at_PPYR1_5end | |||
|id=chr10:47083454..47083472,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.00e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.69e-11;12!CL:0002579;6.74e-10;3!CL:0000064;1.19e-09;3!CL:0000067;1.19e-09;3!CL:0005012;1.19e-09;3!CL:0002304;1.19e-09;3!CL:0002580;1.94e-09;3!CL:0000708;2.64e-09;3!CL:0002549;4.94e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.01e-11,12;CL:0002579,5.31e-10,3;CL:0002580,9.70e-10,3;CL:0000708,1.52e-09,3;CL:0000064,1.66e-09,3;CL:0000067,1.66e-09,3;CL:0005012,1.66e-09,3;CL:0002304,1.66e-09,3;CL:0002549,6.11e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.68e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.17e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.07e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000119!1.68e-07!312;UBERON:0000481!3.65e-07!347;UBERON:0002118!3.97e-07!5;UBERON:0004532!3.97e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.90e-12;11!UBERON:0000488;2.50e-12;4!UBERON:0002118;3.16e-10;5!UBERON:0000310;1.00e-09;10!UBERON:0001778;1.19e-09;3!UBERON:0001775;1.19e-09;3!UBERON:0006876;2.61e-09;11!UBERON:0003210;2.64e-09;3!UBERON:0001443;8.80e-09;11!UBERON:0003688;1.82e-08;6!UBERON:0002358;1.82e-08;6!UBERON:0003684;1.82e-08;6!UBERON:0001178;1.82e-08;6!UBERON:0004457;3.17e-08;9!UBERON:0000042;3.17e-08;9!UBERON:0002203;3.19e-08;6!UBERON:0001768;3.19e-08;6!UBERON:0002200;3.19e-08;6!UBERON:0000160;1.34e-07;17!UBERON:0005406;1.63e-07;2!UBERON:0001801;3.33e-07;14!UBERON:0005629;4.94e-07;2!UBERON:0005358;4.94e-07;2!UBERON:0001886;4.94e-07;2!UBERON:0004086;4.94e-07;2!UBERON:0005282;4.94e-07;2!UBERON:0005281;4.94e-07;2!UBERON:0000019;9.17e-07;19!UBERON:0000047;9.17e-07;19!UBERON:0004088;9.17e-07;19!UBERON:0010230;9.17e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,2.50e-12,11;UBERON:0000488,2.91e-12,4;UBERON:0002118,2.62e-10,5;UBERON:0000310,8.52e-10,10;UBERON:0003210,1.52e-09,3;UBERON:0001778,1.66e-09,3;UBERON:0001775,1.66e-09,3;UBERON:0006876,3.14e-09,11;UBERON:0001443,7.62e-09,11;UBERON:0003688,1.50e-08,6;UBERON:0002358,1.50e-08,6;UBERON:0003684,1.50e-08,6;UBERON:0001178,1.50e-08,6;UBERON:0002203,3.52e-08,6;UBERON:0001768,3.52e-08,6;UBERON:0002200,3.52e-08,6;UBERON:0000160,1.49e-07,17;UBERON:0005406,1.74e-07,2;UBERON:0001801,3.65e-07,14;UBERON:0005629,6.11e-07,2;UBERON:0005358,6.11e-07,2;UBERON:0001886,6.11e-07,2;UBERON:0004086,6.11e-07,2;UBERON:0005282,6.11e-07,2;UBERON:0005281,6.11e-07,2 | |||
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|short_description=p1@PPYR1 | |||
}} |
Revision as of 13:29, 10 September 2013
Short description: | p1@PPYR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PPYR1_5end |
Coexpression cluster: | NA |
Association with transcript: | -61bp_to_ENST00000374312, NM_005972, uc001jee.2, uc009xna.2_5end |
EntrezGene: | PPYR1 |
HGNC: | 9329 |
UniProt: | P50391 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.01e-11 | 12 |
omentum preadipocyte | 5.31e-10 | 3 |
preadipocyte of the breast | 9.70e-10 | 3 |
leptomeningeal cell | 1.52e-09 | 3 |
ciliated cell | 1.66e-09 | 3 |
ciliated epithelial cell | 1.66e-09 | 3 |
multi-ciliated epithelial cell | 1.66e-09 | 3 |
non-pigmented ciliary epithelial cell | 1.66e-09 | 3 |
fibroblast of choroid plexus | 6.11e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 2.50e-12 | 11 |
atypical epithelium | 2.91e-12 | 4 |
right ovary | 2.62e-10 | 5 |
breast | 8.52e-10 | 10 |
blood-cerebrospinal fluid barrier | 1.52e-09 | 3 |
ciliary epithelium | 1.66e-09 | 3 |
ciliary body | 1.66e-09 | 3 |
vasculature of organ | 3.14e-09 | 11 |
chest | 7.62e-09 | 11 |
omentum | 1.50e-08 | 6 |
peritoneum | 1.50e-08 | 6 |
abdominal cavity | 1.50e-08 | 6 |
visceral peritoneum | 1.50e-08 | 6 |
vasculature of eye | 3.52e-08 | 6 |
uvea | 3.52e-08 | 6 |
vasculature of head | 3.52e-08 | 6 |
intestine | 1.49e-07 | 17 |
perirenal fat | 1.74e-07 | 2 |
anterior segment of eyeball | 3.65e-07 | 14 |
vascular plexus | 6.11e-07 | 2 |
ventricle of nervous system | 6.11e-07 | 2 |
choroid plexus | 6.11e-07 | 2 |
brain ventricle | 6.11e-07 | 2 |
ventricular system of brain | 6.11e-07 | 2 |
ventricular system of central nervous system | 6.11e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.07e-10 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.