FFCP PHASE1:Hg19::chr10:134000414..134000432,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10570|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3016|TSSclassifier=S|UniProt=O14531|association_with_transcript=0bp_to_NM_006426,uc009ybb.2_5end|description=CAGE_peak_2_at_DPYSL4_5end|id=chr10:134000414..134000432,+|ontology_enrichment_celltype=CL:0002321!8.28e-13!248;CL:0000220!4.01e-12!246;CL:0000055!3.87e-11!180;CL:0000133!7.01e-11!59;CL:0000221!1.02e-10!71;CL:0002319!1.30e-10!25;CL:0000071!2.36e-07!18;CL:0002546!2.36e-07!18;CL:0000222!2.77e-07!119;CL:0000393!4.48e-07!60;CL:0000211!4.48e-07!60;CL:0000047!4.68e-07!8|ontology_enrichment_celltype_v019=CL:0002319;1.61e-10;25!CL:0002321;6.27e-08;15!CL:0002322;1.05e-07;5!CL:0000128;1.74e-07;7!CL:0000126;1.74e-07;7!CL:0000127;1.74e-07;7!CL:0000540;6.84e-07;6!CL:0000404;6.84e-07;6|ontology_enrichment_celltype_v019_2=CL:0000221,2.88e-13,72;CL:0000133,6.83e-13,59;CL:0002319,1.13e-10,25;CL:0000047,1.04e-09,8;CL:0002321,9.13e-09,250;CL:0002322,1.09e-07,5;CL:0000128,1.82e-07,7;CL:0000126,1.82e-07,7;CL:0000127,1.82e-07,7;CL:0002453,1.82e-07,7;CL:0000540,6.61e-07,6;CL:0000031,6.61e-07,6;CL:0000404,6.61e-07,6|ontology_enrichment_development_v019=CL:0000133;2.66e-07;59!CL:0000031;6.84e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.64e-25!82;UBERON:0000073!1.13e-24!94;UBERON:0001016!1.13e-24!94;UBERON:0005743!1.69e-24!86;UBERON:0002346!1.96e-21!90;UBERON:0003075!9.18e-21!86;UBERON:0007284!9.18e-21!86;UBERON:0000119!4.62e-20!312;UBERON:0000483!3.40e-19!309;UBERON:0000924!8.23e-19!173;UBERON:0006601!8.23e-19!173;UBERON:0001049!1.26e-18!57;UBERON:0005068!1.26e-18!57;UBERON:0006241!1.26e-18!57;UBERON:0007135!1.26e-18!57;UBERON:0000955!2.64e-18!69;UBERON:0006238!2.64e-18!69;UBERON:0004121!4.35e-18!169;UBERON:0000025!4.21e-17!194;UBERON:0002616!7.97e-16!59;UBERON:0003056!1.36e-15!61;UBERON:0002780!9.75e-15!41;UBERON:0001890!9.75e-15!41;UBERON:0006240!9.75e-15!41;UBERON:0000033!1.24e-14!123;UBERON:0001893!3.10e-14!34;UBERON:0003080!5.34e-14!42;UBERON:0001869!5.50e-14!32;UBERON:0002791!1.09e-13!33;UBERON:0002020!1.39e-13!34;UBERON:0003528!1.39e-13!34;UBERON:0000475!2.67e-13!365;UBERON:0000153!3.14e-13!129;UBERON:0007811!3.14e-13!129;UBERON:0004111!3.85e-13!241;UBERON:0000956!1.16e-12!25;UBERON:0000203!1.16e-12!25;UBERON:0000477!1.35e-10!286;UBERON:0002619!1.45e-10!22;UBERON:0001950!2.03e-09!20;UBERON:0000468!3.01e-09!659;UBERON:0001981!5.11e-09!60;UBERON:0007500!5.11e-09!60;UBERON:0004537!5.11e-09!60;UBERON:0006965!5.11e-09!60;UBERON:0004872!1.37e-08!84;UBERON:0002049!2.20e-08!79;UBERON:0007798!2.20e-08!79;UBERON:0000922!4.33e-08!612;UBERON:0001986!2.36e-07!18;UBERON:0004638!2.36e-07!18;UBERON:0004852!2.36e-07!18;UBERON:0000055!2.83e-07!69|ontology_enrichment_uberon_v019=UBERON:0000956;2.84e-22;25!UBERON:0000203;2.84e-22;25!UBERON:0001869;1.59e-20;32!UBERON:0001893;8.08e-20;34!UBERON:0002791;2.83e-19;32!UBERON:0002619;2.49e-18;22!UBERON:0003528;4.29e-17;34!UBERON:0002020;4.29e-17;34!UBERON:0002780;1.17e-16;41!UBERON:0001890;1.17e-16;41!UBERON:0001950;4.51e-16;20!UBERON:0000073;3.85e-14;53!UBERON:0002616;3.85e-14;53!UBERON:0000955;1.17e-10;68!UBERON:0001017;1.68e-08;75!UBERON:0001016;1.70e-08;83!UBERON:0001871;5.29e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.34e-29,81;UBERON:0001016,3.67e-29,89;UBERON:0003075,8.29e-27,82;UBERON:0007284,8.29e-27,82;UBERON:0002346,3.74e-26,86;UBERON:0003056,5.92e-25,61;UBERON:0000073,6.03e-24,53;UBERON:0002616,6.03e-24,53;UBERON:0001049,1.14e-23,56;UBERON:0005068,1.14e-23,56;UBERON:0006241,1.14e-23,56;UBERON:0007135,1.14e-23,56;UBERON:0001869,3.52e-23,32;UBERON:0002780,5.43e-23,41;UBERON:0001890,5.43e-23,41;UBERON:0003080,5.43e-23,41;UBERON:0006240,5.43e-23,41;UBERON:0001893,6.95e-23,34;UBERON:0000956,1.41e-22,25;UBERON:0000203,1.41e-22,25;UBERON:0010371,4.87e-22,104;UBERON:0002791,3.14e-21,32;UBERON:0000955,6.54e-21,68;UBERON:0006238,6.54e-21,68;UBERON:0010314,6.12e-20,132;UBERON:0004121,8.17e-20,171;UBERON:0000924,8.17e-20,171;UBERON:0006601,8.17e-20,171;UBERON:0003528,1.57e-19,34;UBERON:0002020,1.57e-19,34;UBERON:0002619,1.21e-18,22;UBERON:0001950,1.68e-16,20;UBERON:0000025,3.22e-15,192;UBERON:0000119,4.81e-14,309;UBERON:0000483,2.41e-13,306;UBERON:0011216,2.01e-10,223;UBERON:0004111,2.13e-10,240;UBERON:0001871,3.43e-07,6|phase1_expression=0,0.214100523890983,0.845726424575827,0,0,0,0,0.631719873426831,0.783556884599516,0.491467873003018,0,0,0,0,0,0,1.20538905604795,0,0.487932798790507,2.95490539384291,1.02000345622126,2.82109249330279,4.00730381983479,3.55873505189499,3.13856598987007,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.128091319725675,0,0.328875809207352,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0.821127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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10570 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3016 | |||
|TSSclassifier=S | |||
|UniProt=O14531 | |||
|association_with_transcript=0bp_to_NM_006426,uc009ybb.2_5end | |||
|description=CAGE_peak_2_at_DPYSL4_5end | |||
|id=chr10:134000414..134000432,+ | |||
|ontology_enrichment_celltype=CL:0002321!8.28e-13!248;CL:0000220!4.01e-12!246;CL:0000055!3.87e-11!180;CL:0000133!7.01e-11!59;CL:0000221!1.02e-10!71;CL:0002319!1.30e-10!25;CL:0000071!2.36e-07!18;CL:0002546!2.36e-07!18;CL:0000222!2.77e-07!119;CL:0000393!4.48e-07!60;CL:0000211!4.48e-07!60;CL:0000047!4.68e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.61e-10;25!CL:0002321;6.27e-08;15!CL:0002322;1.05e-07;5!CL:0000128;1.74e-07;7!CL:0000126;1.74e-07;7!CL:0000127;1.74e-07;7!CL:0000540;6.84e-07;6!CL:0000404;6.84e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.88e-13,72;CL:0000133,6.83e-13,59;CL:0002319,1.13e-10,25;CL:0000047,1.04e-09,8;CL:0002321,9.13e-09,250;CL:0002322,1.09e-07,5;CL:0000128,1.82e-07,7;CL:0000126,1.82e-07,7;CL:0000127,1.82e-07,7;CL:0002453,1.82e-07,7;CL:0000540,6.61e-07,6;CL:0000031,6.61e-07,6;CL:0000404,6.61e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000133;2.66e-07;59!CL:0000031;6.84e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p2@DPYSL4 | |||
}} |
Revision as of 12:25, 10 September 2013
Short description: | p2@DPYSL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_DPYSL4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_006426, uc009ybb.2_5end |
EntrezGene: | DPYSL4 |
HGNC: | 3016 |
UniProt: | O14531 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.88e-13 | 72 |
neurectodermal cell | 6.83e-13 | 59 |
neural cell | 1.13e-10 | 25 |
neuronal stem cell | 1.04e-09 | 8 |
embryonic cell | 9.13e-09 | 250 |
embryonic stem cell | 1.09e-07 | 5 |
oligodendrocyte | 1.82e-07 | 7 |
macroglial cell | 1.82e-07 | 7 |
astrocyte | 1.82e-07 | 7 |
oligodendrocyte precursor cell | 1.82e-07 | 7 |
neuron | 6.61e-07 | 6 |
neuroblast | 6.61e-07 | 6 |
electrically signaling cell | 6.61e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.