FFCP PHASE1:Hg19::chr17:38020557..38020572,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=22806 | |EntrezGene=22806 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13178 | |HGNC=13178 | ||
|TSSclassifier=S | |||
|UniProt=Q9UKT9 | |UniProt=Q9UKT9 | ||
|association_with_transcript=-116bp_to_ENST00000293068,ENST00000346872,ENST00000348427,ENST00000377944,ENST00000377945,ENST00000377952,ENST00000377958,ENST00000394189,ENST00000488188,ENST00000535189,NM_012481,NM_183228,NM_183229,NM_183230,NM_183231,NM_183232,uc002hsu.2,uc002hsv.2,uc002hsw.2,uc002hsx.2,uc002hsy.2,uc002hsz.2,uc002hta.2,uc002htb.2,uc002htc.2,uc002htd.2,uc010cwd.2,uc010cwe.2,uc010cwf.2,uc010cwg.2,uc010cwh.2_5end | |association_with_transcript=-116bp_to_ENST00000293068,ENST00000346872,ENST00000348427,ENST00000377944,ENST00000377945,ENST00000377952,ENST00000377958,ENST00000394189,ENST00000488188,ENST00000535189,NM_012481,NM_183228,NM_183229,NM_183230,NM_183231,NM_183232,uc002hsu.2,uc002hsv.2,uc002hsw.2,uc002hsx.2,uc002hsy.2,uc002hsz.2,uc002hta.2,uc002htb.2,uc002htc.2,uc002htd.2,uc010cwd.2,uc010cwe.2,uc010cwf.2,uc010cwg.2,uc010cwh.2_5end | ||
Revision as of 10:44, 8 July 2013
| Short description: | p4@IKZF3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_IKZF3_5end |
| Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
| Association with transcript: | -116bp_to_ENST00000293068, ENST00000346872, ENST00000348427, ENST00000377944, ENST00000377945, ENST00000377952, ENST00000377958, ENST00000394189, ENST00000488188, ENST00000535189, NM_012481, NM_183228, NM_183229, NM_183230, NM_183231, NM_183232, uc002hsu.2, uc002hsv.2, uc0 |
| EntrezGene: | IKZF3 |
| HGNC: | 13178 |
| UniProt: | Q9UKT9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphocyte | 2.85e-69 | 53 |
| common lymphoid progenitor | 2.85e-69 | 53 |
| lymphoid lineage restricted progenitor cell | 1.26e-67 | 52 |
| leukocyte | 4.08e-40 | 136 |
| nongranular leukocyte | 1.47e-37 | 115 |
| lymphocyte of B lineage | 2.06e-37 | 24 |
| pro-B cell | 2.06e-37 | 24 |
| hematopoietic cell | 5.66e-32 | 177 |
| hematopoietic stem cell | 5.88e-31 | 168 |
| hematopoietic lineage restricted progenitor cell | 6.21e-31 | 120 |
| mature alpha-beta T cell | 1.51e-28 | 18 |
| alpha-beta T cell | 1.51e-28 | 18 |
| immature T cell | 1.51e-28 | 18 |
| mature T cell | 1.51e-28 | 18 |
| immature alpha-beta T cell | 1.51e-28 | 18 |
| hematopoietic oligopotent progenitor cell | 4.46e-27 | 161 |
| hematopoietic multipotent progenitor cell | 4.46e-27 | 161 |
| T cell | 4.94e-26 | 25 |
| pro-T cell | 4.94e-26 | 25 |
| B cell | 1.43e-25 | 14 |
| CD8-positive, alpha-beta T cell | 6.08e-20 | 11 |
| CD4-positive, alpha-beta T cell | 3.47e-09 | 6 |
| Ontology term | p-value | n |
|---|---|---|
| blood | 1.98e-23 | 15 |
| haemolymphatic fluid | 1.98e-23 | 15 |
| organism substance | 1.98e-23 | 15 |
| hemopoietic organ | 1.29e-11 | 7 |
| immune organ | 1.29e-11 | 7 |
| hematopoietic system | 1.66e-08 | 98 |
| blood island | 1.66e-08 | 98 |
| hemolymphoid system | 1.80e-08 | 108 |
| thymus | 5.89e-07 | 4 |
| hemolymphoid system gland | 5.89e-07 | 4 |
| thymic region | 5.89e-07 | 4 |
| pharyngeal gland | 5.89e-07 | 4 |
| thymus primordium | 5.89e-07 | 4 |
| Ontology term | p-value | n |
|---|---|---|
| lymphoma | 2.62e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
