FFCP PHASE1:Hg19::chr15:32976620..32976643,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6447 | |EntrezGene=6447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10816 | |HGNC=10816 | ||
|TSSclassifier=S | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000475752_5end | |association_with_transcript=0bp_to_ENST00000475752_5end | ||
Revision as of 20:47, 6 July 2013
| Short description: | p2@SCG5 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_SCG5_5end |
| Coexpression cluster: | C2329_cholangiocellular_gall_pagetoid_mesenchymal_bone_Macrophage_Aortic |
| Association with transcript: | 0bp_to_ENST00000475752_5end |
| EntrezGene: | SCG5 |
| HGNC: | 10816 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@SCG5 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| somatic stem cell | 1.39e-13 | 433 |
| fibroblast | 6.96e-13 | 76 |
| multi fate stem cell | 9.23e-13 | 427 |
| stem cell | 1.07e-12 | 441 |
| vascular associated smooth muscle cell | 2.80e-11 | 32 |
| preadipocyte | 9.44e-11 | 12 |
| aortic smooth muscle cell | 1.51e-10 | 10 |
| skin fibroblast | 5.67e-10 | 23 |
| mesenchymal cell | 1.65e-08 | 354 |
| connective tissue cell | 7.19e-08 | 361 |
| Ontology term | p-value | n |
|---|---|---|
| skin of body | 3.87e-15 | 41 |
| integument | 3.97e-15 | 46 |
| integumental system | 3.97e-15 | 46 |
| blood vessel smooth muscle | 1.51e-10 | 10 |
| arterial system smooth muscle | 1.51e-10 | 10 |
| artery smooth muscle tissue | 1.51e-10 | 10 |
| aorta smooth muscle tissue | 1.51e-10 | 10 |
| artery | 6.52e-10 | 42 |
| arterial blood vessel | 6.52e-10 | 42 |
| arterial system | 6.52e-10 | 42 |
| Ontology term | p-value | n |
|---|---|---|
| ovarian cancer | 2.59e-11 | 14 |
| musculoskeletal system disease | 6.58e-07 | 5 |
| myotonic disease | 6.58e-07 | 5 |
| muscle tissue disease | 6.58e-07 | 5 |
| myopathy | 6.58e-07 | 5 |
| muscular disease | 6.58e-07 | 5 |
| myotonic dystrophy | 6.58e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
