FFCP PHASE1:Hg19::chr9:118915915..118915930,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!3.06e-28!180;CL:0000187!4.88e-24!54;CL:0000680!5.91e-23!57;CL:0000056!5.91e-23!57;CL:0000355!5.91e-23!57;CL:0000183!1.26e-21!59;CL:0000393!5.33e-20!60;CL:0000211!5.33e-20!60;CL:0000057!8.84e-19!75;CL:0000192!1.21e-18!42;CL:0000514!1.21e-18!42;CL:0000359!1.50e-17!32;CL:0002620!5.65e-13!23;CL:0000222!7.35e-09!119;CL:0000048!4.07e-08!430;CL:0000723!1.52e-07!436;CL:0000034!7.99e-07!444 | |ontology_enrichment_celltype=CL:0000055!3.06e-28!180;CL:0000187!4.88e-24!54;CL:0000680!5.91e-23!57;CL:0000056!5.91e-23!57;CL:0000355!5.91e-23!57;CL:0000183!1.26e-21!59;CL:0000393!5.33e-20!60;CL:0000211!5.33e-20!60;CL:0000057!8.84e-19!75;CL:0000192!1.21e-18!42;CL:0000514!1.21e-18!42;CL:0000359!1.50e-17!32;CL:0002620!5.65e-13!23;CL:0000222!7.35e-09!119;CL:0000048!4.07e-08!430;CL:0000723!1.52e-07!436;CL:0000034!7.99e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:1000306;7.06e-09;4!CL:0002547;7.06e-09;4!CL:0002588;4.31e-08;2!CL:0002559;3.10e-07;5!CL:0002595;3.53e-07;5!CL:0000359;7.25e-07;32!CL:0002620;8.79e-07;23 | |ontology_enrichment_celltype_v019=CL:1000306;7.06e-09;4!CL:0002547;7.06e-09;4!CL:0002588;4.31e-08;2!CL:0002559;3.10e-07;5!CL:0002595;3.53e-07;5!CL:0000359;7.25e-07;32!CL:0002620;8.79e-07;23 | ||
|ontology_enrichment_celltype_v019_2=CL:1000306,9.84e-09,4;CL:0002547,9.84e-09,4;CL:0000187,2.94e-08,55;CL:0000057,2.95e-08,76;CL:0000192,7.42e-08,43;CL:0000514,7.42e-08,43;CL:0002588,9.21e-08,2;CL:0000680,1.08e-07,58;CL:0000056,1.08e-07,58;CL:0000355,1.08e-07,58;CL:0000359,1.70e-07,32;CL:0002559,2.41e-07,5;CL:0002595,3.33e-07,5;CL:0000393,3.50e-07,61;CL:0000211,3.50e-07,61;CL:0002620,8.34e-07,23 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!2.31e-22!70;UBERON:0000914!7.15e-21!83;UBERON:0002329!7.15e-21!83;UBERON:0003077!7.15e-21!83;UBERON:0003059!7.15e-21!83;UBERON:0007282!7.15e-21!83;UBERON:0009618!7.15e-21!83;UBERON:0007285!7.15e-21!83;UBERON:0001134!2.30e-20!61;UBERON:0002036!2.30e-20!61;UBERON:0003082!2.30e-20!61;UBERON:0000486!1.03e-19!82;UBERON:0002385!3.33e-19!63;UBERON:0001015!3.33e-19!63;UBERON:0000383!3.33e-19!63;UBERON:0001637!2.14e-11!42;UBERON:0003509!2.14e-11!42;UBERON:0004572!2.14e-11!42;UBERON:0005256!3.78e-11!143;UBERON:0004872!5.22e-11!84;UBERON:0002049!2.60e-10!79;UBERON:0007798!2.60e-10!79;UBERON:0004573!9.19e-10!33;UBERON:0004571!9.19e-10!33;UBERON:0002199!1.03e-09!45;UBERON:0002416!1.03e-09!45;UBERON:0004535!2.24e-09!110;UBERON:0001981!5.47e-09!60;UBERON:0007500!5.47e-09!60;UBERON:0004537!5.47e-09!60;UBERON:0006965!5.47e-09!60;UBERON:0000475!6.61e-09!365;UBERON:0001009!9.72e-09!113;UBERON:0002097!2.79e-08!40;UBERON:0002100!4.12e-08!216;UBERON:0003914!4.65e-07!118 | |ontology_enrichment_uberon=UBERON:0004290!2.31e-22!70;UBERON:0000914!7.15e-21!83;UBERON:0002329!7.15e-21!83;UBERON:0003077!7.15e-21!83;UBERON:0003059!7.15e-21!83;UBERON:0007282!7.15e-21!83;UBERON:0009618!7.15e-21!83;UBERON:0007285!7.15e-21!83;UBERON:0001134!2.30e-20!61;UBERON:0002036!2.30e-20!61;UBERON:0003082!2.30e-20!61;UBERON:0000486!1.03e-19!82;UBERON:0002385!3.33e-19!63;UBERON:0001015!3.33e-19!63;UBERON:0000383!3.33e-19!63;UBERON:0001637!2.14e-11!42;UBERON:0003509!2.14e-11!42;UBERON:0004572!2.14e-11!42;UBERON:0005256!3.78e-11!143;UBERON:0004872!5.22e-11!84;UBERON:0002049!2.60e-10!79;UBERON:0007798!2.60e-10!79;UBERON:0004573!9.19e-10!33;UBERON:0004571!9.19e-10!33;UBERON:0002199!1.03e-09!45;UBERON:0002416!1.03e-09!45;UBERON:0004535!2.24e-09!110;UBERON:0001981!5.47e-09!60;UBERON:0007500!5.47e-09!60;UBERON:0004537!5.47e-09!60;UBERON:0006965!5.47e-09!60;UBERON:0000475!6.61e-09!365;UBERON:0001009!9.72e-09!113;UBERON:0002097!2.79e-08!40;UBERON:0002100!4.12e-08!216;UBERON:0003914!4.65e-07!118 | ||
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| ||
|short_description=p12@PAPPA | |short_description=p12@PAPPA | ||
}} | }} |
Revision as of 11:42, 21 November 2012
Short description: | p12@PAPPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_PAPPA_5end |
Coexpression cluster: | C4794_placenta_Smooth_Fibroblast_neuroectodermal_Lens_mesenchymal_chorionic |
Association with transcript: | -140bp_to_NM_002581, uc004bjn.2_5end |
EntrezGene: | PAPPA |
HGNC: | 8602 |
UniProt: | Q13219Q7Z613Q86YM8Q8IWT8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 9.84e-09 | 4 |
fibroblast of the aortic adventitia | 9.84e-09 | 4 |
muscle cell | 2.94e-08 | 55 |
fibroblast | 2.95e-08 | 76 |
smooth muscle cell | 7.42e-08 | 43 |
smooth muscle myoblast | 7.42e-08 | 43 |
smooth muscle cell of the umbilical vein | 9.21e-08 | 2 |
muscle precursor cell | 1.08e-07 | 58 |
myoblast | 1.08e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.08e-07 | 58 |
vascular associated smooth muscle cell | 1.70e-07 | 32 |
hair follicle cell | 2.41e-07 | 5 |
smooth muscle cell of the subclavian artery | 3.33e-07 | 5 |
electrically responsive cell | 3.50e-07 | 61 |
electrically active cell | 3.50e-07 | 61 |
skin fibroblast | 8.34e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
artery wall | 9.84e-09 | 4 |
tunica adventitia of artery | 9.84e-09 | 4 |
adventitia | 9.84e-09 | 4 |
tunica adventitia of blood vessel | 9.84e-09 | 4 |
aorta tunica adventitia | 9.84e-09 | 4 |
aorta wall | 9.84e-09 | 4 |
somite | 5.22e-08 | 71 |
presomitic mesoderm | 5.22e-08 | 71 |
presumptive segmental plate | 5.22e-08 | 71 |
dermomyotome | 5.22e-08 | 71 |
trunk paraxial mesoderm | 5.22e-08 | 71 |
paraxial mesoderm | 7.47e-08 | 72 |
presumptive paraxial mesoderm | 7.47e-08 | 72 |
dense mesenchyme tissue | 1.06e-07 | 73 |
systemic artery | 2.16e-07 | 33 |
systemic arterial system | 2.16e-07 | 33 |
hair follicle | 2.41e-07 | 5 |
hair follicle placode | 2.41e-07 | 5 |
integument | 2.46e-07 | 46 |
integumental system | 2.46e-07 | 46 |
thoracic segment blood vessel | 3.33e-07 | 5 |
subclavian artery | 3.33e-07 | 5 |
skeletal muscle tissue | 5.04e-07 | 62 |
striated muscle tissue | 5.04e-07 | 62 |
myotome | 5.04e-07 | 62 |
skin of body | 5.24e-07 | 41 |
epithelial vesicle | 5.26e-07 | 78 |
artery | 9.84e-07 | 42 |
arterial blood vessel | 9.84e-07 | 42 |
arterial system | 9.84e-07 | 42 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.