FFCP PHASE1:Hg19::chr14:107183929..107183940,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000945!1.16e-25!24;CL:0000826!1.16e-25!24;CL:0000236!2.62e-17!14;CL:0000838!2.81e-10!52;CL:0000542!4.95e-10!53;CL:0000051!4.95e-10!53 | |ontology_enrichment_celltype=CL:0000945!1.16e-25!24;CL:0000826!1.16e-25!24;CL:0000236!2.62e-17!14;CL:0000838!2.81e-10!52;CL:0000542!4.95e-10!53;CL:0000051!4.95e-10!53 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;4.72e-17;1!UBERON:0006298;7.57e-17;1!UBERON:0006242;1.65e-16;1!UBERON:0006595;1.08e-09;86 | |ontology_enrichment_development_v019=UBERON:0001045;4.72e-17;1!UBERON:0006298;7.57e-17;1!UBERON:0006242;1.65e-16;1!UBERON:0006595;1.08e-09;86 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.39e-30!115;UBERON:0001829!1.82e-09!2;UBERON:0001044!6.58e-07!6;UBERON:0003293!6.58e-07!6;UBERON:0003294!6.58e-07!6;UBERON:0010047!6.58e-07!6;UBERON:0000167!6.58e-07!6 | |ontology_enrichment_uberon=UBERON:0007023!4.39e-30!115;UBERON:0001829!1.82e-09!2;UBERON:0001044!6.58e-07!6;UBERON:0003293!6.58e-07!6;UBERON:0003294!6.58e-07!6;UBERON:0010047!6.58e-07!6;UBERON:0000167!6.58e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;4.72e-17;1!UBERON:0001153;4.72e-17;1!UBERON:0009854;4.72e-17;1!UBERON:0002372;5.98e-17;1!UBERON:0000029;5.98e-17;1!UBERON:0001961;5.98e-17;1!UBERON:0001744;5.98e-17;1!UBERON:0001042;5.98e-17;1!UBERON:0001735;5.98e-17;1!UBERON:0001736;7.57e-17;1!UBERON:0004921;5.08e-14;33!UBERON:0001044;3.39e-11;6!UBERON:0003293;3.39e-11;6!UBERON:0003294;3.39e-11;6!UBERON:0010047;3.39e-11;6!UBERON:0003408;3.39e-11;6!UBERON:0000167;3.39e-11;6!UBERON:0006562;3.86e-09;2!UBERON:0001829;4.34e-09;2!UBERON:0003127;6.42e-09;2!UBERON:0000341;6.42e-09;2!UBERON:0000160;2.78e-08;17!UBERON:0000161;6.54e-08;19!UBERON:0000166;6.54e-08;19!UBERON:0001007;7.15e-08;81!UBERON:0001155;8.31e-08;9!UBERON:0002465;3.54e-07;10!UBERON:0001555;8.47e-07;54 | |ontology_enrichment_uberon_v019=UBERON:0001154;4.72e-17;1!UBERON:0001153;4.72e-17;1!UBERON:0009854;4.72e-17;1!UBERON:0002372;5.98e-17;1!UBERON:0000029;5.98e-17;1!UBERON:0001961;5.98e-17;1!UBERON:0001744;5.98e-17;1!UBERON:0001042;5.98e-17;1!UBERON:0001735;5.98e-17;1!UBERON:0001736;7.57e-17;1!UBERON:0004921;5.08e-14;33!UBERON:0001044;3.39e-11;6!UBERON:0003293;3.39e-11;6!UBERON:0003294;3.39e-11;6!UBERON:0010047;3.39e-11;6!UBERON:0003408;3.39e-11;6!UBERON:0000167;3.39e-11;6!UBERON:0006562;3.86e-09;2!UBERON:0001829;4.34e-09;2!UBERON:0003127;6.42e-09;2!UBERON:0000341;6.42e-09;2!UBERON:0000160;2.78e-08;17!UBERON:0000161;6.54e-08;19!UBERON:0000166;6.54e-08;19!UBERON:0001007;7.15e-08;81!UBERON:0001155;8.31e-08;9!UBERON:0002465;3.54e-07;10!UBERON:0001555;8.47e-07;54 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,4.72e-17,1;UBERON:0001153,4.72e-17,1;UBERON:0001045,4.72e-17,1;UBERON:0002372,5.53e-17,1;UBERON:0001961,5.53e-17,1;UBERON:0001744,5.53e-17,1;UBERON:0001735,5.53e-17,1;UBERON:0000029,6.47e-17,1;UBERON:0001736,7.57e-17,1;UBERON:0006298,7.57e-17,1;UBERON:0007023,2.85e-15,114;UBERON:0001044,3.39e-11,6;UBERON:0003293,3.39e-11,6;UBERON:0003294,3.39e-11,6;UBERON:0010047,3.39e-11,6;UBERON:0000167,3.39e-11,6;UBERON:0005409,1.01e-09,25;UBERON:0001829,4.34e-09,2;UBERON:0000341,4.70e-09,2;UBERON:0003127,5.49e-09,2;UBERON:0000160,2.85e-08,17;UBERON:0001155,7.51e-08,9;UBERON:0001007,1.12e-07,145;UBERON:0001555,1.12e-07,145;UBERON:0007026,1.12e-07,145;UBERON:0004921,1.35e-07,118;UBERON:0002465,3.54e-07,10;UBERON:0003408,4.52e-07,10;UBERON:0000166,6.62e-07,22;UBERON:0004119,7.08e-07,160;UBERON:0000925,7.08e-07,160;UBERON:0006595,7.08e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.985207073399349,1.10195093839151,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0.574752439954483,0.661044872784862,0,0.569212969109448,1.17447437874188,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,4.14425873296722,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50377859655677,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775912131907355,0,0,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.427149650270779,0,0.414239055347196,3.47316215268366,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08043821351123,0,0,0,0,0,0,0,0,1.31577485171795,0.193373663920732,0,0,0,0,0,2.2936464170227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,1.70587185520785,0,0.0645889098360061,0,0,0.12729431655633,0,0.653150243690884,0,3.56965880977314,1.43444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.985207073399349,1.10195093839151,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0.574752439954483,0.661044872784862,0,0.569212969109448,1.17447437874188,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,4.14425873296722,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50377859655677,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775912131907355,0,0,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.427149650270779,0,0.414239055347196,3.47316215268366,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08043821351123,0,0,0,0,0,0,0,0,1.31577485171795,0.193373663920732,0,0,0,0,0,2.2936464170227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,1.70587185520785,0,0.0645889098360061,0,0,0.12729431655633,0,0.653150243690884,0,3.56965880977314,1.43444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | ||
|short_description=p1@IGHV3-71 | |short_description=p1@IGHV3-71 | ||
}} | }} |
Revision as of 02:01, 21 November 2012
Short description: | p1@IGHV3-71 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_IGHV3-71_5end |
Coexpression cluster: | C218_tonsil_lymph_CD19_spleen_colon_appendix_salivary |
Association with transcript: | -72bp_to_ENST00000523324_5end |
EntrezGene: | NA |
HGNC: | 5621 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 4.72e-17 | 1 |
caecum | 4.72e-17 | 1 |
midgut | 4.72e-17 | 1 |
tonsil | 5.53e-17 | 1 |
mucosa-associated lymphoid tissue | 5.53e-17 | 1 |
lymphoid tissue | 5.53e-17 | 1 |
tonsillar ring | 5.53e-17 | 1 |
lymph node | 6.47e-17 | 1 |
submandibular gland | 7.57e-17 | 1 |
submandibular gland primordium | 7.57e-17 | 1 |
adult organism | 2.85e-15 | 114 |
saliva-secreting gland | 3.39e-11 | 6 |
gland of oral region | 3.39e-11 | 6 |
gland of foregut | 3.39e-11 | 6 |
oral gland | 3.39e-11 | 6 |
oral cavity | 3.39e-11 | 6 |
gastrointestinal system | 1.01e-09 | 25 |
major salivary gland | 4.34e-09 | 2 |
throat | 4.70e-09 | 2 |
open tracheal system trachea | 5.49e-09 | 2 |
intestine | 2.85e-08 | 17 |
colon | 7.51e-08 | 9 |
digestive system | 1.12e-07 | 145 |
digestive tract | 1.12e-07 | 145 |
primitive gut | 1.12e-07 | 145 |
subdivision of digestive tract | 1.35e-07 | 118 |
lymphoid system | 3.54e-07 | 10 |
gland of gut | 4.52e-07 | 10 |
oral opening | 6.62e-07 | 22 |
endoderm-derived structure | 7.08e-07 | 160 |
endoderm | 7.08e-07 | 160 |
presumptive endoderm | 7.08e-07 | 160 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.