FFCP PHASE1:Hg19::chr14:62024238..62024249,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype=CL:0002149!1.62e-07!6;CL:0002255!1.62e-07!6;CL:0000197!3.05e-07!6;CL:0000098!3.05e-07!6;CL:0002167!3.05e-07!6;CL:0002334!6.34e-07!12 | |ontology_enrichment_celltype=CL:0002149!1.62e-07!6;CL:0002255!1.62e-07!6;CL:0000197!3.05e-07!6;CL:0000098!3.05e-07!6;CL:0002167!3.05e-07!6;CL:0002334!6.34e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000228;1.42e-13;1!CL:0002372;1.42e-13;1!CL:0000134;9.31e-10;55!CL:0002149;2.35e-09;6!CL:0002255;2.35e-09;6!CL:0000048;3.95e-07;58!CL:0000034;5.81e-07;69 | |ontology_enrichment_celltype_v019=CL:0000228;1.42e-13;1!CL:0002372;1.42e-13;1!CL:0000134;9.31e-10;55!CL:0002149;2.35e-09;6!CL:0002255;2.35e-09;6!CL:0000048;3.95e-07;58!CL:0000034;5.81e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000228,1.42e-13,1;CL:0002372,1.42e-13,1;CL:0002149,2.26e-09,6;CL:0002255,2.26e-09,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:120!5.53e-14!27;DOID:193!8.63e-13!29;DOID:3001!1.62e-07!6;DOID:2394!7.38e-07!14 | |ontology_enrichment_disease=DOID:120!5.53e-14!27;DOID:193!8.63e-13!29;DOID:3001!1.62e-07!6;DOID:2394!7.38e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;6.93e-32;14!DOID:120;6.69e-29;27!DOID:193;7.32e-27;29!DOID:2513;1.42e-13;1!DOID:3001;2.35e-09;6!DOID:3451;1.99e-07;2!DOID:4159;1.99e-07;2!DOID:0060122;1.99e-07;2 | |ontology_enrichment_disease_v019=DOID:2394;6.93e-32;14!DOID:120;6.69e-29;27!DOID:193;7.32e-27;29!DOID:2513;1.42e-13;1!DOID:3001;2.35e-09;6!DOID:3451;1.99e-07;2!DOID:4159;1.99e-07;2!DOID:0060122;1.99e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,6.57e-32,14;DOID:120,6.21e-29,27;DOID:193,6.84e-27,29;DOID:2513,1.83e-13,1;DOID:3001,2.26e-09,6;DOID:3451,2.25e-07,2;DOID:4159,2.25e-07,2;DOID:0060122,2.25e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000992;7.99e-16;13!UBERON:0003134;5.88e-14;33!UBERON:0002119;1.34e-13;4!UBERON:0002118;4.33e-11;5!UBERON:0000991;6.81e-10;21!UBERON:0000474;1.68e-09;37!UBERON:0003100;5.57e-09;41 | |ontology_enrichment_uberon_v019=UBERON:0000992;7.99e-16;13!UBERON:0003134;5.88e-14;33!UBERON:0002119;1.34e-13;4!UBERON:0002118;4.33e-11;5!UBERON:0000991;6.81e-10;21!UBERON:0000474;1.68e-09;37!UBERON:0003100;5.57e-09;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,8.30e-16,13;UBERON:0002119,1.43e-13,4;UBERON:0003134,5.87e-12,37;UBERON:0000474,5.87e-12,37;UBERON:0002118,4.33e-11,5;UBERON:0003100,9.29e-11,41;UBERON:0000991,6.97e-10,21;UBERON:0009196,6.97e-10,21;UBERON:0009117,6.97e-10,21;UBERON:0005564,6.97e-10,21;UBERON:0004176,1.92e-09,22;UBERON:0003133,3.88e-09,48;UBERON:0005156,2.31e-07,59;UBERON:0000990,2.31e-07,59;UBERON:0002323,9.73e-07,46 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.189069634328136,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0,0.194874010322397,0,0,0.161646056818812,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.695582429850461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66376689224646,0.356857977594324,0.473107245101804,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.640695746278505,1.02341449813341,0,0,0,0.177561725313127,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0,0.107420244868274,0,0,0,0.330569830721956,0,0,0.10115778085555,0,0,0,0.616067160352178,0,0,0,0.143124886741991,0,0,0,0,0,0.636406495851874,0.78494864019923,0,0,0,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00533503561846,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.520679215005393,0,0.0870592065804026,0.873633341210151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.701139929541673,0,0,0,0.889811221596536,0,0.302461847526478,0,0.147855149989634,2.70804504178294,0,9.16051445569931,0,0,5.73919567992907,0,1.90402606084398,2.84809513243263,0,11.3855190465038,0,0,0,1.37358282073117,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,13.5142396031358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,8.37557241293664,2.8666168169323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.189069634328136,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0,0.194874010322397,0,0,0.161646056818812,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.695582429850461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66376689224646,0.356857977594324,0.473107245101804,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.640695746278505,1.02341449813341,0,0,0,0.177561725313127,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0,0.107420244868274,0,0,0,0.330569830721956,0,0,0.10115778085555,0,0,0,0.616067160352178,0,0,0,0.143124886741991,0,0,0,0,0,0.636406495851874,0.78494864019923,0,0,0,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00533503561846,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.520679215005393,0,0.0870592065804026,0.873633341210151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.701139929541673,0,0,0,0.889811221596536,0,0.302461847526478,0,0.147855149989634,2.70804504178294,0,9.16051445569931,0,0,5.73919567992907,0,1.90402606084398,2.84809513243263,0,11.3855190465038,0,0,0,1.37358282073117,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,13.5142396031358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,8.37557241293664,2.8666168169323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr14:62024238..62024249,+ | |short_description=p@chr14:62024238..62024249,+ | ||
}} | }} |
Revision as of 00:39, 21 November 2012
Short description: | p@chr14:62024238..62024249, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:62024238..62024249, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 1.42e-13 | 1 |
myotube | 1.42e-13 | 1 |
epithelial cell of uterus | 2.26e-09 | 6 |
stromal cell of endometrium | 2.26e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
female gonad | 8.30e-16 | 13 |
left ovary | 1.43e-13 | 4 |
female reproductive organ | 5.87e-12 | 37 |
female reproductive system | 5.87e-12 | 37 |
right ovary | 4.33e-11 | 5 |
female organism | 9.29e-11 | 41 |
gonad | 6.97e-10 | 21 |
indifferent external genitalia | 6.97e-10 | 21 |
indifferent gonad | 6.97e-10 | 21 |
gonad primordium | 6.97e-10 | 21 |
external genitalia | 1.92e-09 | 22 |
reproductive organ | 3.88e-09 | 48 |
reproductive structure | 2.31e-07 | 59 |
reproductive system | 2.31e-07 | 59 |
body cavity | 9.73e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.57e-32 | 14 |
female reproductive organ cancer | 6.21e-29 | 27 |
reproductive organ cancer | 6.84e-27 | 29 |
basal cell carcinoma | 1.83e-13 | 1 |
female reproductive endometrioid cancer | 2.26e-09 | 6 |
skin carcinoma | 2.25e-07 | 2 |
skin cancer | 2.25e-07 | 2 |
integumentary system cancer | 2.25e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.