FFCP PHASE1:Hg19::chr12:53614115..53614154,-: Difference between revisions
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|ontology_enrichment_celltype_v019=CL:0002620;2.82e-10;23!CL:0000192;9.65e-09;43!CL:0000359;1.12e-08;32!CL:0000057;1.36e-07;73!CL:0000187;2.44e-07;55 | |ontology_enrichment_celltype_v019=CL:0002620;2.82e-10;23!CL:0000192;9.65e-09;43!CL:0000359;1.12e-08;32!CL:0000057;1.36e-07;73!CL:0000187;2.44e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.29e-17,76;CL:0000680,1.84e-14,58;CL:0000056,1.84e-14,58;CL:0000355,1.84e-14,58;CL:0000723,7.11e-14,433;CL:0000048,9.37e-14,427;CL:0000187,4.22e-13,55;CL:0000034,4.71e-13,441;CL:0000192,2.78e-11,43;CL:0000514,2.78e-11,43;CL:0000393,1.17e-10,61;CL:0000211,1.17e-10,61;CL:0002620,2.31e-10,23;CL:0000359,4.48e-09,32;CL:0002320,4.47e-07,361;CL:0000222,7.89e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;9.65e-09;43!CL:0000355;2.90e-08;58 | |ontology_enrichment_development_v019=CL:0000514;9.65e-09;43!CL:0000355;2.90e-08;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@RARG | |short_description=p1@RARG | ||
}} | }} |
Revision as of 17:53, 20 November 2012
Short description: | p1@RARG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RARG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001scd.2, uc010sob.1, uc010sod.1_5end |
EntrezGene: | RARG |
HGNC: | 9866 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.29e-17 | 76 |
muscle precursor cell | 1.84e-14 | 58 |
myoblast | 1.84e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.84e-14 | 58 |
somatic stem cell | 7.11e-14 | 433 |
multi fate stem cell | 9.37e-14 | 427 |
muscle cell | 4.22e-13 | 55 |
stem cell | 4.71e-13 | 441 |
smooth muscle cell | 2.78e-11 | 43 |
smooth muscle myoblast | 2.78e-11 | 43 |
electrically responsive cell | 1.17e-10 | 61 |
electrically active cell | 1.17e-10 | 61 |
skin fibroblast | 2.31e-10 | 23 |
vascular associated smooth muscle cell | 4.48e-09 | 32 |
connective tissue cell | 4.47e-07 | 361 |
mesodermal cell | 7.89e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
somite | 5.96e-17 | 71 |
presomitic mesoderm | 5.96e-17 | 71 |
presumptive segmental plate | 5.96e-17 | 71 |
dermomyotome | 5.96e-17 | 71 |
trunk paraxial mesoderm | 5.96e-17 | 71 |
epithelial vesicle | 7.03e-17 | 78 |
dense mesenchyme tissue | 1.08e-16 | 73 |
surface structure | 3.06e-16 | 99 |
paraxial mesoderm | 3.50e-16 | 72 |
presumptive paraxial mesoderm | 3.50e-16 | 72 |
multilaminar epithelium | 1.20e-14 | 83 |
skeletal muscle tissue | 1.52e-13 | 62 |
striated muscle tissue | 1.52e-13 | 62 |
myotome | 1.52e-13 | 62 |
musculoskeletal system | 3.34e-13 | 167 |
muscle tissue | 5.61e-13 | 64 |
musculature | 5.61e-13 | 64 |
musculature of body | 5.61e-13 | 64 |
skin of body | 4.12e-12 | 41 |
integument | 5.26e-12 | 46 |
integumental system | 5.26e-12 | 46 |
trunk mesenchyme | 1.43e-09 | 122 |
mesoderm | 2.53e-09 | 315 |
mesoderm-derived structure | 2.53e-09 | 315 |
presumptive mesoderm | 2.53e-09 | 315 |
unilaminar epithelium | 3.93e-08 | 148 |
mesenchyme | 7.15e-08 | 160 |
entire embryonic mesenchyme | 7.15e-08 | 160 |
connective tissue | 4.86e-07 | 371 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.