FFCP PHASE1:Hg19::chr13:111214015..111214076,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000766!8.08e-32!76;CL:0000557!3.16e-25!71;CL:0000839!6.54e-25!70;CL:0002194!7.51e-25!63;CL:0000576!7.51e-25!63;CL:0000040!7.51e-25!63;CL:0000559!7.51e-25!63;CL:0002057!7.46e-24!42;CL:0000860!1.02e-22!45;CL:0002009!1.64e-22!65;CL:0000763!2.52e-20!112;CL:0000049!2.52e-20!112;CL:0000738!2.34e-09!140;CL:0000037!3.49e-08!172;CL:0000566!3.49e-08!172;CL:0002032!1.36e-07!165;CL:0000837!1.36e-07!165;CL:0002087!1.60e-07!119;CL:0000988!2.14e-07!182 | |ontology_enrichment_celltype=CL:0000766!8.08e-32!76;CL:0000557!3.16e-25!71;CL:0000839!6.54e-25!70;CL:0002194!7.51e-25!63;CL:0000576!7.51e-25!63;CL:0000040!7.51e-25!63;CL:0000559!7.51e-25!63;CL:0002057!7.46e-24!42;CL:0000860!1.02e-22!45;CL:0002009!1.64e-22!65;CL:0000763!2.52e-20!112;CL:0000049!2.52e-20!112;CL:0000738!2.34e-09!140;CL:0000037!3.49e-08!172;CL:0000566!3.49e-08!172;CL:0002032!1.36e-07!165;CL:0000837!1.36e-07!165;CL:0002087!1.60e-07!119;CL:0000988!2.14e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.11e-18;39!CL:0000234;3.11e-18;39!CL:0000860;7.98e-18;33!CL:0002057;7.98e-18;33!CL:0000576;1.77e-15;48!CL:0000766;8.58e-15;69!CL:0000763;3.56e-08;100 | |ontology_enrichment_celltype_v019=CL:0000473;3.11e-18;39!CL:0000234;3.11e-18;39!CL:0000860;7.98e-18;33!CL:0002057;7.98e-18;33!CL:0000576;1.77e-15;48!CL:0000766;8.58e-15;69!CL:0000763;3.56e-08;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.11e-33,72;CL:0000473,6.80e-28,48;CL:0000234,6.80e-28,48;CL:0000557,5.65e-27,67;CL:0002194,1.41e-26,59;CL:0000576,1.41e-26,59;CL:0000040,1.41e-26,59;CL:0000559,1.41e-26,59;CL:0000839,1.52e-26,66;CL:0002009,3.32e-24,61;CL:0000860,4.81e-24,42;CL:0002057,4.81e-24,42;CL:0000763,1.38e-21,108;CL:0000049,1.38e-21,108;CL:0000738,1.61e-09,136;CL:0000037,2.16e-08,168;CL:0002032,9.66e-08,161;CL:0000837,9.66e-08,161;CL:0000988,1.29e-07,177;CL:0002087,1.75e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.47e-17;42!CL:0000049;3.97e-07;108 | |ontology_enrichment_development_v019=CL:0002057;1.47e-17;42!CL:0000049;3.97e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.05e-18!80;UBERON:0002390!2.25e-18!102;UBERON:0003061!2.25e-18!102;UBERON:0002405!1.00e-17!115;UBERON:0001474!8.61e-15!86;UBERON:0002193!9.27e-15!112;UBERON:0000926!5.97e-13!448;UBERON:0004120!5.97e-13!448;UBERON:0006603!5.97e-13!448;UBERON:0003081!1.96e-11!216;UBERON:0000062!4.16e-11!511;UBERON:0007023!1.38e-09!115;UBERON:0000922!2.37e-09!612;UBERON:0004765!3.09e-09!101;UBERON:0001434!3.09e-09!101;UBERON:0002050!1.33e-08!605;UBERON:0005423!1.33e-08!605;UBERON:0000923!1.88e-08!604;UBERON:0005291!1.88e-08!604;UBERON:0006598!1.88e-08!604;UBERON:0002532!1.88e-08!604;UBERON:0004921!2.06e-08!129;UBERON:0004185!2.06e-08!129;UBERON:0000466!6.92e-07!126;UBERON:0001041!7.73e-07!98 | |ontology_enrichment_uberon=UBERON:0002371!1.05e-18!80;UBERON:0002390!2.25e-18!102;UBERON:0003061!2.25e-18!102;UBERON:0002405!1.00e-17!115;UBERON:0001474!8.61e-15!86;UBERON:0002193!9.27e-15!112;UBERON:0000926!5.97e-13!448;UBERON:0004120!5.97e-13!448;UBERON:0006603!5.97e-13!448;UBERON:0003081!1.96e-11!216;UBERON:0000062!4.16e-11!511;UBERON:0007023!1.38e-09!115;UBERON:0000922!2.37e-09!612;UBERON:0004765!3.09e-09!101;UBERON:0001434!3.09e-09!101;UBERON:0002050!1.33e-08!605;UBERON:0005423!1.33e-08!605;UBERON:0000923!1.88e-08!604;UBERON:0005291!1.88e-08!604;UBERON:0006598!1.88e-08!604;UBERON:0002532!1.88e-08!604;UBERON:0004921!2.06e-08!129;UBERON:0004185!2.06e-08!129;UBERON:0000466!6.92e-07!126;UBERON:0001041!7.73e-07!98 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.13e-20,76;UBERON:0002390,2.04e-19,98;UBERON:0003061,2.04e-19,98;UBERON:0001474,6.54e-16,82;UBERON:0002193,1.37e-15,108;UBERON:0002405,2.64e-14,93;UBERON:0004765,2.57e-13,90;UBERON:0003081,5.58e-12,203;UBERON:0000922,5.20e-10,592;UBERON:0007023,1.10e-09,114;UBERON:0000923,1.96e-09,560;UBERON:0010316,1.96e-09,560;UBERON:0005291,1.96e-09,560;UBERON:0006598,1.96e-09,560;UBERON:0010317,1.96e-09,560;UBERON:0002532,1.96e-09,560;UBERON:0001434,2.23e-09,100;UBERON:0005423,3.33e-09,581;UBERON:0002050,5.45e-09,564;UBERON:0004921,1.34e-08,118;UBERON:0000926,4.49e-08,315;UBERON:0004120,4.49e-08,315;UBERON:0006603,4.49e-08,315;UBERON:0001041,4.48e-07,87 | |||
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| ||
|short_description=p1@RAB20 | |short_description=p1@RAB20 | ||
}} | }} |
Revision as of 01:33, 20 November 2012
Short description: | p1@RAB20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RAB20_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_NM_017817, uc001vqy.2_5end |
EntrezGene: | RAB20 |
HGNC: | 18260 |
UniProt: | Q9NX57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.11e-33 | 72 |
defensive cell | 6.80e-28 | 48 |
phagocyte | 6.80e-28 | 48 |
granulocyte monocyte progenitor cell | 5.65e-27 | 67 |
monopoietic cell | 1.41e-26 | 59 |
monocyte | 1.41e-26 | 59 |
monoblast | 1.41e-26 | 59 |
promonocyte | 1.41e-26 | 59 |
myeloid lineage restricted progenitor cell | 1.52e-26 | 66 |
macrophage dendritic cell progenitor | 3.32e-24 | 61 |
classical monocyte | 4.81e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.81e-24 | 42 |
myeloid cell | 1.38e-21 | 108 |
common myeloid progenitor | 1.38e-21 | 108 |
leukocyte | 1.61e-09 | 136 |
hematopoietic stem cell | 2.16e-08 | 168 |
hematopoietic oligopotent progenitor cell | 9.66e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.66e-08 | 161 |
hematopoietic cell | 1.29e-07 | 177 |
nongranular leukocyte | 1.75e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.13e-20 | 76 |
hematopoietic system | 2.04e-19 | 98 |
blood island | 2.04e-19 | 98 |
bone element | 6.54e-16 | 82 |
hemolymphoid system | 1.37e-15 | 108 |
immune system | 2.64e-14 | 93 |
skeletal element | 2.57e-13 | 90 |
lateral plate mesoderm | 5.58e-12 | 203 |
embryo | 5.20e-10 | 592 |
adult organism | 1.10e-09 | 114 |
germ layer | 1.96e-09 | 560 |
germ layer / neural crest | 1.96e-09 | 560 |
embryonic tissue | 1.96e-09 | 560 |
presumptive structure | 1.96e-09 | 560 |
germ layer / neural crest derived structure | 1.96e-09 | 560 |
epiblast (generic) | 1.96e-09 | 560 |
skeletal system | 2.23e-09 | 100 |
developing anatomical structure | 3.33e-09 | 581 |
embryonic structure | 5.45e-09 | 564 |
subdivision of digestive tract | 1.34e-08 | 118 |
mesoderm | 4.49e-08 | 315 |
mesoderm-derived structure | 4.49e-08 | 315 |
presumptive mesoderm | 4.49e-08 | 315 |
foregut | 4.48e-07 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.