FFCP PHASE1:Hg19::chr2:211542948..211542962,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.62e-23;29 | |ontology_enrichment_development_v019=UBERON:0008947;9.62e-23;29 | ||
|ontology_enrichment_disease=DOID:305!3.37e-07!106 | |ontology_enrichment_disease=DOID:305!3.37e-07!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,8.00e-12,106;DOID:0050687,5.08e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!9.96e-15!9;UBERON:0004119!1.62e-09!169;UBERON:0000925!1.62e-09!169;UBERON:0006595!1.62e-09!169;UBERON:0001007!1.37e-07!155;UBERON:0001555!1.37e-07!155;UBERON:0007026!1.37e-07!155;UBERON:0004921!2.36e-07!129;UBERON:0004185!2.36e-07!129;UBERON:0002107!6.14e-07!19;UBERON:0006925!6.14e-07!19;UBERON:0008836!6.14e-07!19;UBERON:0009497!7.29e-07!25;UBERON:0000015!7.29e-07!25;UBERON:0002423!7.29e-07!25;UBERON:0006235!7.29e-07!25;UBERON:0004161!7.29e-07!25;UBERON:0008835!7.95e-07!22;UBERON:0003894!7.95e-07!22 | |ontology_enrichment_uberon=UBERON:0001737!9.96e-15!9;UBERON:0004119!1.62e-09!169;UBERON:0000925!1.62e-09!169;UBERON:0006595!1.62e-09!169;UBERON:0001007!1.37e-07!155;UBERON:0001555!1.37e-07!155;UBERON:0007026!1.37e-07!155;UBERON:0004921!2.36e-07!129;UBERON:0004185!2.36e-07!129;UBERON:0002107!6.14e-07!19;UBERON:0006925!6.14e-07!19;UBERON:0008836!6.14e-07!19;UBERON:0009497!7.29e-07!25;UBERON:0000015!7.29e-07!25;UBERON:0002423!7.29e-07!25;UBERON:0006235!7.29e-07!25;UBERON:0004161!7.29e-07!25;UBERON:0008835!7.95e-07!22;UBERON:0003894!7.95e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.63e-62;9!UBERON:0001557;1.63e-62;9!UBERON:0000072;4.40e-16;37!UBERON:0000065;3.10e-13;44!UBERON:0002423;1.30e-09;25!UBERON:0002107;3.58e-09;19!UBERON:0006925;3.58e-09;19 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.63e-62;9!UBERON:0001557;1.63e-62;9!UBERON:0000072;4.40e-16;37!UBERON:0000065;3.10e-13;44!UBERON:0002423;1.30e-09;25!UBERON:0002107;3.58e-09;19!UBERON:0006925;3.58e-09;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.47e-62,9;UBERON:0001557,6.22e-29,19;UBERON:0008947,5.81e-17,38;UBERON:0003258,5.81e-17,38;UBERON:0001041,2.25e-15,87;UBERON:0004921,8.86e-14,118;UBERON:0000072,2.18e-13,47;UBERON:0001007,4.61e-12,145;UBERON:0001555,4.61e-12,145;UBERON:0007026,4.61e-12,145;UBERON:0004119,5.33e-12,160;UBERON:0000925,5.33e-12,160;UBERON:0006595,5.33e-12,160;UBERON:0000065,1.98e-11,54;UBERON:0009497,1.27e-09,25;UBERON:0000015,1.27e-09,25;UBERON:0002423,1.27e-09,25;UBERON:0006235,1.27e-09,25;UBERON:0004161,1.27e-09,25;UBERON:0002107,3.48e-09,19;UBERON:0006925,3.48e-09,19;UBERON:0008836,3.48e-09,19;UBERON:0001048,3.84e-08,160;UBERON:0008835,6.72e-08,22;UBERON:0003894,6.72e-08,22;UBERON:0001004,6.97e-08,74;UBERON:0009854,1.52e-07,23;UBERON:0007499,6.39e-07,25 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0.597794722207204,0,0,0,0,0.245668634623536,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.310983165046111,0,1.09493207722749,0,0,0,0,0,8.87301000298829,11.9695129955452,13.2556066435915,9.92645754591546,9.36881609597346,10.6771778599993,12.4044803507351,10.9884020470194,8.84918460976698,0,0,0,0,72.2503698484436,6.87979051674338,10.0434284135839,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,0,0,0,0.117141414992713,0,0,0,0.664225598535437,0,0,0.195801157462741,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0.120859449591622,0.200506470303285,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.28550171051106,0,0,0,0,0,0,0,0,0,0.429680979473094,0,0.170453254832202,0.0890320356467374,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.02520324971387,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,1.30998378285754,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0.236387681767936,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0,12.3100463776459,0.139423744278603,0,0,0,0.269272933229316,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0,0,0,0.158936578980379,0,0,0,0.216388639742091,0,0.530745387020035,0.611030144933625,0,0,0,0,0,0.234264445725339,0,0,0,0,4.83962864194656,0,0,0,0,0.664653872707185,0,0,0,0.284609546029793,0,0,0.0979923974143777,0,0,0.171986032471617,5.90213620863419,4.75080561060206,4.51635013792651,0,0,0,0.137041924646751,0,0.0633107959558787,2.54216797555244,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,0,0.236349546921671,0.164831716762333,0.13480708770837,0.0984274815147488,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0,0,6.09576953731672,0,0,0,0.25426853765475,0.542999601753713,0,0,0,0,0,0,4.83622371137672,35.7768600062998,0,0.39669780522807,0.684347351537318,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0.138348634936231,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0.800055529326307,0.343395705182793,0,0,0,0,0,0.453411851024545,0.231522474323834,0.734210113519403,0.179088841081487,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0,0.171488009437418,0.0679697329768317,0.0657727735628491,0,0.333694205676207,0,0,0,0,0,0,0.142953088353313,0,0.581207126840626,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0.540219106755613,9.39806110167016,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0.286679166302903,0.157771562193185,0,0,4.2322147241232,0,0,0,0.504665699340316,0.109265571963696,0.126698501011437,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0.112131862580613,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0.597794722207204,0,0,0,0,0.245668634623536,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.310983165046111,0,1.09493207722749,0,0,0,0,0,8.87301000298829,11.9695129955452,13.2556066435915,9.92645754591546,9.36881609597346,10.6771778599993,12.4044803507351,10.9884020470194,8.84918460976698,0,0,0,0,72.2503698484436,6.87979051674338,10.0434284135839,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,0,0,0,0.117141414992713,0,0,0,0.664225598535437,0,0,0.195801157462741,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0.120859449591622,0.200506470303285,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.28550171051106,0,0,0,0,0,0,0,0,0,0.429680979473094,0,0.170453254832202,0.0890320356467374,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.02520324971387,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,1.30998378285754,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0.236387681767936,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0,12.3100463776459,0.139423744278603,0,0,0,0.269272933229316,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0,0,0,0.158936578980379,0,0,0,0.216388639742091,0,0.530745387020035,0.611030144933625,0,0,0,0,0,0.234264445725339,0,0,0,0,4.83962864194656,0,0,0,0,0.664653872707185,0,0,0,0.284609546029793,0,0,0.0979923974143777,0,0,0.171986032471617,5.90213620863419,4.75080561060206,4.51635013792651,0,0,0,0.137041924646751,0,0.0633107959558787,2.54216797555244,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,0,0.236349546921671,0.164831716762333,0.13480708770837,0.0984274815147488,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0,0,6.09576953731672,0,0,0,0.25426853765475,0.542999601753713,0,0,0,0,0,0,4.83622371137672,35.7768600062998,0,0.39669780522807,0.684347351537318,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0.138348634936231,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0.800055529326307,0.343395705182793,0,0,0,0,0,0.453411851024545,0.231522474323834,0.734210113519403,0.179088841081487,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0,0.171488009437418,0.0679697329768317,0.0657727735628491,0,0.333694205676207,0,0,0,0,0,0,0.142953088353313,0,0.581207126840626,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0.540219106755613,9.39806110167016,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0.286679166302903,0.157771562193185,0,0,4.2322147241232,0,0,0,0.504665699340316,0.109265571963696,0.126698501011437,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0.112131862580613,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:211542948..211542962,+ | |short_description=p@chr2:211542948..211542962,+ | ||
}} | }} |
Revision as of 09:24, 19 November 2012
Short description: | p@chr2:211542948..211542962, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:211542948..211542962, + |
Coexpression cluster: | C768_Hepatocyte_liver_cervical_Hep2_epitheloid_large_nonsmall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 1.47e-62 | 9 |
upper respiratory tract | 6.22e-29 | 19 |
respiratory primordium | 5.81e-17 | 38 |
endoderm of foregut | 5.81e-17 | 38 |
foregut | 2.25e-15 | 87 |
subdivision of digestive tract | 8.86e-14 | 118 |
segment of respiratory tract | 2.18e-13 | 47 |
digestive system | 4.61e-12 | 145 |
digestive tract | 4.61e-12 | 145 |
primitive gut | 4.61e-12 | 145 |
endoderm-derived structure | 5.33e-12 | 160 |
endoderm | 5.33e-12 | 160 |
presumptive endoderm | 5.33e-12 | 160 |
respiratory tract | 1.98e-11 | 54 |
epithelium of foregut-midgut junction | 1.27e-09 | 25 |
anatomical boundary | 1.27e-09 | 25 |
hepatobiliary system | 1.27e-09 | 25 |
foregut-midgut junction | 1.27e-09 | 25 |
septum transversum | 1.27e-09 | 25 |
liver | 3.48e-09 | 19 |
digestive gland | 3.48e-09 | 19 |
liver bud | 3.48e-09 | 19 |
primordium | 3.84e-08 | 160 |
hepatic diverticulum | 6.72e-08 | 22 |
liver primordium | 6.72e-08 | 22 |
respiratory system | 6.97e-08 | 74 |
digestive tract diverticulum | 1.52e-07 | 23 |
epithelial sac | 6.39e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.00e-12 | 106 |
cell type cancer | 5.08e-08 | 143 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.