FFCP PHASE1:Hg19::chr3:112357559..112357568,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000057!3.31e-13!75;CL:0000136!1.16e-12!15;CL:0000055!1.88e-12!180;CL:0002334!3.05e-11!12;CL:0002620!1.42e-08!23 | |ontology_enrichment_celltype=CL:0000057!3.31e-13!75;CL:0000136!1.16e-12!15;CL:0000055!1.88e-12!180;CL:0002334!3.05e-11!12;CL:0002620!1.42e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0000136;8.42e-20;13!CL:0002334;6.70e-16;12!CL:0002579;1.89e-13;3!CL:0002615;2.38e-13;3!CL:1000306;1.68e-10;4!CL:0002547;1.68e-10;4!CL:0002617;9.61e-10;2!CL:0000153;1.73e-07;9!CL:0000447;1.73e-07;9 | |ontology_enrichment_celltype_v019=CL:0000136;8.42e-20;13!CL:0002334;6.70e-16;12!CL:0002579;1.89e-13;3!CL:0002615;2.38e-13;3!CL:1000306;1.68e-10;4!CL:0002547;1.68e-10;4!CL:0002617;9.61e-10;2!CL:0000153;1.73e-07;9!CL:0000447;1.73e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.62e-17,15;CL:0002334,3.96e-16,12;CL:0002579,1.61e-13,3;CL:0002615,3.53e-13,3;CL:0000057,1.52e-11,76;CL:1000306,1.51e-10,4;CL:0002547,1.51e-10,4;CL:0002617,1.01e-09,2;CL:0000153,1.51e-07,9;CL:0000447,1.51e-07,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!5.74e-11!57;UBERON:0004457!1.34e-09!12;UBERON:0000042!1.34e-09!12;UBERON:0003688!8.54e-09!6;UBERON:0002358!8.54e-09!6;UBERON:0003684!8.54e-09!6;UBERON:0001178!8.54e-09!6;UBERON:0002199!1.40e-07!45;UBERON:0002416!1.40e-07!45 | |ontology_enrichment_uberon=UBERON:0004923!5.74e-11!57;UBERON:0004457!1.34e-09!12;UBERON:0000042!1.34e-09!12;UBERON:0003688!8.54e-09!6;UBERON:0002358!8.54e-09!6;UBERON:0003684!8.54e-09!6;UBERON:0001178!8.54e-09!6;UBERON:0002199!1.40e-07!45;UBERON:0002416!1.40e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.14e-29;9!UBERON:0000042;6.14e-29;9!UBERON:0003688;4.85e-25;6!UBERON:0002358;4.85e-25;6!UBERON:0003684;4.85e-25;6!UBERON:0001178;4.85e-25;6!UBERON:0004797;1.68e-10;4!UBERON:0000415;1.68e-10;4!UBERON:0007240;1.68e-10;4!UBERON:0005742;1.68e-10;4!UBERON:0005734;1.68e-10;4!UBERON:0004664;1.68e-10;4!UBERON:0004663;1.68e-10;4!UBERON:0005406;4.50e-09;2!UBERON:0002072;5.01e-08;5!UBERON:0000310;6.36e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0004457;6.14e-29;9!UBERON:0000042;6.14e-29;9!UBERON:0003688;4.85e-25;6!UBERON:0002358;4.85e-25;6!UBERON:0003684;4.85e-25;6!UBERON:0001178;4.85e-25;6!UBERON:0004797;1.68e-10;4!UBERON:0000415;1.68e-10;4!UBERON:0007240;1.68e-10;4!UBERON:0005742;1.68e-10;4!UBERON:0005734;1.68e-10;4!UBERON:0004664;1.68e-10;4!UBERON:0004663;1.68e-10;4!UBERON:0005406;4.50e-09;2!UBERON:0002072;5.01e-08;5!UBERON:0000310;6.36e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.14e-25,6;UBERON:0002358,6.14e-25,6;UBERON:0003684,6.14e-25,6;UBERON:0001178,6.14e-25,6;UBERON:0004457,2.54e-21,12;UBERON:0000042,2.54e-21,12;UBERON:0000415,1.51e-10,4;UBERON:0007240,1.51e-10,4;UBERON:0005742,1.51e-10,4;UBERON:0005734,1.51e-10,4;UBERON:0004664,1.51e-10,4;UBERON:0004663,1.51e-10,4;UBERON:0004797,5.90e-10,7;UBERON:0004923,2.72e-09,66;UBERON:0005406,3.83e-09,2;UBERON:0002199,2.16e-08,46;UBERON:0002416,2.16e-08,46;UBERON:0002072,4.04e-08,5;UBERON:0004458,5.22e-08,49;UBERON:0000310,5.62e-07,10;UBERON:0002384,8.96e-07,371 | |||
|phase1_expression=3.27021082687002,3.21150785836475,6.76581139660662,1.0007329835313,3.5756887554183,2.61701557230111,2.53299878168311,3.15859936713415,0,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.383587685530591,0.722878304769133,2.00535164254356,1.88300474649071,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,6.33152558322899,0.794455084879313,22.0864197976587,2.83734705758686,0,0,0.74000264525148,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.89694817844431,0.85422955527427,0.635795703478686,1.80054657650641,1.44273540933814,0.257640540045629,1.11670113798954,0.506328996723799,0.779496041289589,0.504867548488229,0.920498986422993,1.77810662500693,2.84007674013291,1.0075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,1.50473049863859,0,0,0,0,0.434418072340414,0,0,0,0,0,0.606255142892519,1.66435439510497,0.604780586659361,3.72161711728165,0.153461973288062,1.68396056659844,7.17579235831925,1.53512174720011,5.30817939773905,1.48418066444991,0,1.77561725313127,0.410635780069046,0.519254429183621,0.464841513839837,0,0,0,0.918515585316854,0,2.36023946926963,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,4.82051789532479,0.096670718292122,0.154048617114644,0.15350367472613,0.275673144969061,0.107420244868274,0.145016693914229,0,0.445160178233687,0,0,0,0.10115778085555,0.929691098594572,9.4443704049192,0,0.924100740528266,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.989838023675989,0,0,0.66343897524122,0,0,0,0,0,0,0.286822704408103,0.196498082026242,0,0,2.9555068941673,2.30506425071931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,2.37571744666111,0,0,0,0.222617410045812,0,0,0.19924798825107,0.552567831062295,0,0,0,1.55519793830904,0,0,0,0.986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,1.00035336054936,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.442287822516696,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0.426905989478705,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,1.39641200636127,0.229160424011684,0,0.199679000498991,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,2.17199840701485,1.72844298240254,0.653174720218818,0,0,0.511164065356265,0,0,0,0,0,0,0,0.320362237703084,0.157204305099666,0.414239055347196,0,0,0,0,0.544017803369474,0.5013797880454,0.612691153526923,0.327872630709804,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.447764408660622,0.467426619694449,0,0,0.251567901752575,0,0.686520205190771,1.51230923763239,0,0.147855149989634,0,0,0,1.24411862352257,0,0.521745061811734,0.150257608997218,0.380805212168795,0,0,0,0.464033759878494,0.398095888698616,0,0.686791410365586,0,0,0,0,0,0.453411851024545,0.231522474323834,0,0.179088841081487,0,1.09642024789354,0.176689145945881,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.451261970095544,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.857440047187092,0.0679697329768317,0,0,0,0.235479278551542,0,0.280272163313789,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,2.4285549652957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0.679708458751268,0.281951753939561,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0.743990036333503,1.38652688589425,0.865253124247578,0,0,0,0,0,0.0918948995348449,0,1.13668047327359,0,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0.112131862580613,0.12729431655633,0,0.870866991587845,0.342233301085281,0.134704106029175,0.215166616178029,0,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 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| ||
|short_description=p@chr3:112357559..112357568,- | |short_description=p@chr3:112357559..112357568,- | ||
}} | }} |
Revision as of 05:08, 19 November 2012
Short description: | p@chr3:112357559..112357568, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:112357559..112357568, - |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.62e-17 | 15 |
preadipocyte | 3.96e-16 | 12 |
omentum preadipocyte | 1.61e-13 | 3 |
adipocyte of omentum tissue | 3.53e-13 | 3 |
fibroblast | 1.52e-11 | 76 |
fibroblast of tunica adventitia of artery | 1.51e-10 | 4 |
fibroblast of the aortic adventitia | 1.51e-10 | 4 |
adipocyte of breast | 1.01e-09 | 2 |
GAG secreting cell | 1.51e-07 | 9 |
carbohydrate secreting cell | 1.51e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.14e-25 | 6 |
peritoneum | 6.14e-25 | 6 |
abdominal cavity | 6.14e-25 | 6 |
visceral peritoneum | 6.14e-25 | 6 |
cavity lining | 2.54e-21 | 12 |
serous membrane | 2.54e-21 | 12 |
artery wall | 1.51e-10 | 4 |
tunica adventitia of artery | 1.51e-10 | 4 |
adventitia | 1.51e-10 | 4 |
tunica adventitia of blood vessel | 1.51e-10 | 4 |
aorta tunica adventitia | 1.51e-10 | 4 |
aorta wall | 1.51e-10 | 4 |
blood vessel layer | 5.90e-10 | 7 |
organ component layer | 2.72e-09 | 66 |
perirenal fat | 3.83e-09 | 2 |
integument | 2.16e-08 | 46 |
integumental system | 2.16e-08 | 46 |
hypodermis | 4.04e-08 | 5 |
body cavity or lining | 5.22e-08 | 49 |
breast | 5.62e-07 | 10 |
connective tissue | 8.96e-07 | 371 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.