FFCP PHASE1:Hg19::chr1:26231214..26231239,-: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:14566!4.41e-16!239;DOID:162!9.48e-16!235;DOID:0050686!1.22e-10!137;DOID:2531!5.84e-09!51;DOID:0060083!5.84e-09!51;DOID:1240!1.85e-08!39 | |ontology_enrichment_disease=DOID:14566!4.41e-16!239;DOID:162!9.48e-16!235;DOID:0050686!1.22e-10!137;DOID:2531!5.84e-09!51;DOID:0060083!5.84e-09!51;DOID:1240!1.85e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:1240;2.92e-07;39 | |ontology_enrichment_disease_v019=DOID:1240;2.92e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:14566,5.08e-12,239;DOID:162,6.71e-12,235;DOID:1240,6.21e-09,39;DOID:0050686,7.07e-09,137;DOID:2531,1.65e-08,51;DOID:0060083,1.65e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0001017!5.48e-15!82;UBERON:0005743!1.71e-14!86;UBERON:0000073!2.39e-14!94;UBERON:0001016!2.39e-14!94;UBERON:0000955!2.60e-11!69;UBERON:0006238!2.60e-11!69;UBERON:0001049!2.68e-11!57;UBERON:0005068!2.68e-11!57;UBERON:0006241!2.68e-11!57;UBERON:0007135!2.68e-11!57;UBERON:0002020!1.12e-09!34;UBERON:0003528!1.12e-09!34;UBERON:0002346!1.31e-09!90;UBERON:0002616!1.39e-09!59;UBERON:0002780!1.46e-09!41;UBERON:0001890!1.46e-09!41;UBERON:0006240!1.46e-09!41;UBERON:0003080!2.61e-09!42;UBERON:0000956!4.88e-09!25;UBERON:0000203!4.88e-09!25;UBERON:0003075!6.24e-09!86;UBERON:0007284!6.24e-09!86;UBERON:0001893!7.44e-09!34;UBERON:0000924!8.12e-09!173;UBERON:0006601!8.12e-09!173;UBERON:0001869!1.23e-08!32;UBERON:0000153!1.45e-08!129;UBERON:0007811!1.45e-08!129;UBERON:0002791!1.53e-08!33;UBERON:0004121!3.14e-08!169;UBERON:0000033!4.06e-08!123;UBERON:0001950!5.50e-08!20;UBERON:0002619!7.23e-08!22;UBERON:0003056!7.60e-08!61 | |ontology_enrichment_uberon=UBERON:0001017!5.48e-15!82;UBERON:0005743!1.71e-14!86;UBERON:0000073!2.39e-14!94;UBERON:0001016!2.39e-14!94;UBERON:0000955!2.60e-11!69;UBERON:0006238!2.60e-11!69;UBERON:0001049!2.68e-11!57;UBERON:0005068!2.68e-11!57;UBERON:0006241!2.68e-11!57;UBERON:0007135!2.68e-11!57;UBERON:0002020!1.12e-09!34;UBERON:0003528!1.12e-09!34;UBERON:0002346!1.31e-09!90;UBERON:0002616!1.39e-09!59;UBERON:0002780!1.46e-09!41;UBERON:0001890!1.46e-09!41;UBERON:0006240!1.46e-09!41;UBERON:0003080!2.61e-09!42;UBERON:0000956!4.88e-09!25;UBERON:0000203!4.88e-09!25;UBERON:0003075!6.24e-09!86;UBERON:0007284!6.24e-09!86;UBERON:0001893!7.44e-09!34;UBERON:0000924!8.12e-09!173;UBERON:0006601!8.12e-09!173;UBERON:0001869!1.23e-08!32;UBERON:0000153!1.45e-08!129;UBERON:0007811!1.45e-08!129;UBERON:0002791!1.53e-08!33;UBERON:0004121!3.14e-08!169;UBERON:0000033!4.06e-08!123;UBERON:0001950!5.50e-08!20;UBERON:0002619!7.23e-08!22;UBERON:0003056!7.60e-08!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0000956;8.69e-10;25!UBERON:0000203;8.69e-10;25!UBERON:0001950;6.96e-09;20!UBERON:0003528;1.08e-08;34!UBERON:0002020;1.08e-08;34!UBERON:0001869;1.65e-08;32!UBERON:0002791;1.87e-08;32!UBERON:0002619;2.11e-08;22!UBERON:0001893;4.71e-08;34!UBERON:0002780;1.21e-07;41!UBERON:0001890;1.21e-07;41!UBERON:0000073;7.57e-07;53!UBERON:0002616;7.57e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0000956;8.69e-10;25!UBERON:0000203;8.69e-10;25!UBERON:0001950;6.96e-09;20!UBERON:0003528;1.08e-08;34!UBERON:0002020;1.08e-08;34!UBERON:0001869;1.65e-08;32!UBERON:0002791;1.87e-08;32!UBERON:0002619;2.11e-08;22!UBERON:0001893;4.71e-08;34!UBERON:0002780;1.21e-07;41!UBERON:0001890;1.21e-07;41!UBERON:0000073;7.57e-07;53!UBERON:0002616;7.57e-07;53 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.35e-15,81;UBERON:0001016,1.87e-13,89;UBERON:0001049,9.48e-12,56;UBERON:0005068,9.48e-12,56;UBERON:0006241,9.48e-12,56;UBERON:0007135,9.48e-12,56;UBERON:0000955,1.07e-10,68;UBERON:0006238,1.07e-10,68;UBERON:0002346,1.76e-10,86;UBERON:0003528,1.90e-10,34;UBERON:0002020,1.90e-10,34;UBERON:0000073,1.96e-10,53;UBERON:0002616,1.96e-10,53;UBERON:0002780,2.61e-10,41;UBERON:0001890,2.61e-10,41;UBERON:0003080,2.61e-10,41;UBERON:0006240,2.61e-10,41;UBERON:0000956,3.86e-10,25;UBERON:0000203,3.86e-10,25;UBERON:0003075,1.06e-09,82;UBERON:0007284,1.06e-09,82;UBERON:0002791,1.81e-09,32;UBERON:0001950,2.41e-09,20;UBERON:0001869,2.90e-09,32;UBERON:0001893,3.29e-09,34;UBERON:0003056,6.48e-09,61;UBERON:0002619,8.71e-09,22;UBERON:0010371,4.50e-08,104;UBERON:0004121,9.55e-08,171;UBERON:0000924,9.55e-08,171;UBERON:0006601,9.55e-08,171 | |||
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| ||
|short_description=p3@STMN1 | |short_description=p3@STMN1 | ||
}} | }} |
Revision as of 03:11, 19 November 2012
Short description: | p3@STMN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_STMN1_5end |
Coexpression cluster: | C3961_duodenum_occipital_Neurons_merkel_mesenchymal_temporal_parietal |
Association with transcript: | -45bp_to_AB464250, AM392854_5end |
EntrezGene: | STMN1 |
HGNC: | 6510 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.35e-15 | 81 |
nervous system | 1.87e-13 | 89 |
neural tube | 9.48e-12 | 56 |
neural rod | 9.48e-12 | 56 |
future spinal cord | 9.48e-12 | 56 |
neural keel | 9.48e-12 | 56 |
brain | 1.07e-10 | 68 |
future brain | 1.07e-10 | 68 |
neurectoderm | 1.76e-10 | 86 |
brain grey matter | 1.90e-10 | 34 |
gray matter | 1.90e-10 | 34 |
regional part of nervous system | 1.96e-10 | 53 |
regional part of brain | 1.96e-10 | 53 |
regional part of forebrain | 2.61e-10 | 41 |
forebrain | 2.61e-10 | 41 |
anterior neural tube | 2.61e-10 | 41 |
future forebrain | 2.61e-10 | 41 |
cerebral cortex | 3.86e-10 | 25 |
pallium | 3.86e-10 | 25 |
neural plate | 1.06e-09 | 82 |
presumptive neural plate | 1.06e-09 | 82 |
regional part of telencephalon | 1.81e-09 | 32 |
neocortex | 2.41e-09 | 20 |
cerebral hemisphere | 2.90e-09 | 32 |
telencephalon | 3.29e-09 | 34 |
pre-chordal neural plate | 6.48e-09 | 61 |
regional part of cerebral cortex | 8.71e-09 | 22 |
ecto-epithelium | 4.50e-08 | 104 |
ectoderm-derived structure | 9.55e-08 | 171 |
ectoderm | 9.55e-08 | 171 |
presumptive ectoderm | 9.55e-08 | 171 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 5.08e-12 | 239 |
cancer | 6.71e-12 | 235 |
leukemia | 6.21e-09 | 39 |
organ system cancer | 7.07e-09 | 137 |
hematologic cancer | 1.65e-08 | 51 |
immune system cancer | 1.65e-08 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.