FFCP PHASE1:Hg19::chr19:18507990..18508011,-: Difference between revisions
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|ontology_enrichment_celltype_v019=CL:0000875;1.45e-36;3!CL:0002396;1.45e-36;3!CL:0000576;6.21e-24;48!CL:0002393;2.40e-18;6!CL:0002397;2.40e-18;6!CL:0000766;1.54e-14;69!CL:0000860;2.93e-11;33!CL:0002057;2.93e-11;33!CL:0000763;2.85e-09;100!CL:0000473;6.44e-08;39!CL:0000234;6.44e-08;39!CL:0000738;2.81e-07;136!CL:0000094;8.23e-07;8 | |ontology_enrichment_celltype_v019=CL:0000875;1.45e-36;3!CL:0002396;1.45e-36;3!CL:0000576;6.21e-24;48!CL:0002393;2.40e-18;6!CL:0002397;2.40e-18;6!CL:0000766;1.54e-14;69!CL:0000860;2.93e-11;33!CL:0002057;2.93e-11;33!CL:0000763;2.85e-09;100!CL:0000473;6.44e-08;39!CL:0000234;6.44e-08;39!CL:0000738;2.81e-07;136!CL:0000094;8.23e-07;8 | ||
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|ontology_enrichment_development_v019=CL:0002057;1.77e-29;42!CL:0000049;8.09e-10;108!UBERON:0004872;1.29e-07;7 | |ontology_enrichment_development_v019=CL:0002057;1.77e-29;42!CL:0000049;8.09e-10;108!UBERON:0004872;1.29e-07;7 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002106;1.49e-16;3!UBERON:0004177;2.58e-10;5!UBERON:0005057;2.58e-10;5 | |ontology_enrichment_uberon_v019=UBERON:0002106;1.49e-16;3!UBERON:0004177;2.58e-10;5!UBERON:0005057;2.58e-10;5 | ||
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| ||
|short_description=p3@LRRC25 | |short_description=p3@LRRC25 | ||
}} | }} |
Revision as of 18:56, 18 November 2012
Short description: | p3@LRRC25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LRRC25_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 403bp_to_ENST00000339007, NM_145256, uc002niw.2_5end |
EntrezGene: | LRRC25 |
HGNC: | 29806 |
UniProt: | Q8N386 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 3.08e-47 | 9 |
CD14-positive, CD16-positive monocyte | 3.08e-47 | 9 |
classical monocyte | 1.42e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.42e-38 | 42 |
non-classical monocyte | 1.45e-36 | 3 |
CD14-low, CD16-positive monocyte | 1.45e-36 | 3 |
defensive cell | 1.41e-33 | 48 |
phagocyte | 1.41e-33 | 48 |
myeloid leukocyte | 1.05e-29 | 72 |
monopoietic cell | 1.43e-26 | 59 |
monocyte | 1.43e-26 | 59 |
monoblast | 1.43e-26 | 59 |
promonocyte | 1.43e-26 | 59 |
macrophage dendritic cell progenitor | 1.15e-25 | 61 |
myeloid lineage restricted progenitor cell | 1.22e-23 | 66 |
granulocyte monocyte progenitor cell | 2.87e-23 | 67 |
myeloid cell | 2.54e-19 | 108 |
common myeloid progenitor | 2.54e-19 | 108 |
leukocyte | 5.31e-15 | 136 |
nongranular leukocyte | 5.42e-13 | 115 |
hematopoietic oligopotent progenitor cell | 2.13e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.13e-12 | 161 |
hematopoietic lineage restricted progenitor cell | 2.18e-12 | 120 |
hematopoietic stem cell | 8.34e-12 | 168 |
hematopoietic cell | 4.12e-11 | 177 |
granulocyte | 7.66e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.11e-24 | 98 |
blood island | 1.11e-24 | 98 |
immune system | 1.29e-22 | 93 |
hemolymphoid system | 2.99e-22 | 108 |
bone marrow | 2.26e-20 | 76 |
bone element | 8.67e-19 | 82 |
skeletal element | 5.33e-17 | 90 |
spleen | 1.88e-16 | 3 |
gastrointestinal system mesentery | 1.88e-16 | 3 |
stomach region | 1.88e-16 | 3 |
mesentery | 1.88e-16 | 3 |
gastrointestinal system serosa | 1.88e-16 | 3 |
mesentery of stomach | 1.88e-16 | 3 |
gut mesentery | 1.88e-16 | 3 |
dorsal mesentery | 1.88e-16 | 3 |
dorsal mesogastrium | 1.88e-16 | 3 |
peritoneal cavity | 1.88e-16 | 3 |
spleen primordium | 1.88e-16 | 3 |
skeletal system | 3.68e-15 | 100 |
lateral plate mesoderm | 5.45e-11 | 203 |
musculoskeletal system | 1.86e-08 | 167 |
hemopoietic organ | 1.43e-07 | 7 |
immune organ | 1.43e-07 | 7 |
stomach | 9.94e-07 | 8 |
food storage organ | 9.94e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.