FFCP PHASE1:Hg19::chr2:234398493..234398513,-: Difference between revisions
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|ontology_enrichment_celltype_v019_2=CL:0000077,3.44e-25,19;CL:0000244,3.21e-15,4;CL:0000731,3.21e-15,4;CL:0000349,6.39e-13,19;CL:0000066,3.21e-10,253;CL:0000076,2.72e-09,63;CL:0002097,8.57e-09,2;CL:0000317,8.20e-08,2;CL:1000448,8.20e-08,2;CL:0002308,8.20e-08,2;CL:0002140,8.20e-08,2;CL:0002536,9.75e-08,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.20e-18,5;UBERON:0005910,1.75e-15,6;UBERON:0005631,7.43e-11,14;UBERON:0000158,7.43e-11,14;UBERON:0000478,6.93e-10,24;UBERON:0003124,6.07e-08,7;UBERON:0002419,8.20e-08,2;UBERON:0007771,8.20e-08,2;UBERON:0003297,8.20e-08,2;UBERON:0001821,8.20e-08,2;UBERON:0003487,8.20e-08,2;UBERON:0001820,8.20e-08,2;UBERON:0005089,8.20e-08,2;UBERON:0005088,8.20e-08,2 | |||
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| ||
|short_description=p3@USP40 | |short_description=p3@USP40 | ||
}} | }} |
Revision as of 17:26, 18 November 2012
Short description: | p3@USP40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_USP40_5end |
Coexpression cluster: | C4198_mesothelioma_mucinous_cholangiocellular_Urothelial_transitionalcell_anaplastic_pleomorphic |
Association with transcript: | 1bp_to_ENST00000496298_5end |
EntrezGene: | USP40 |
HGNC: | 20069 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 3.44e-25 | 19 |
transitional epithelial cell | 3.21e-15 | 4 |
urothelial cell | 3.21e-15 | 4 |
extraembryonic cell | 6.39e-13 | 19 |
epithelial cell | 3.21e-10 | 253 |
squamous epithelial cell | 2.72e-09 | 63 |
cortical cell of adrenal gland | 8.57e-09 | 2 |
sebum secreting cell | 8.20e-08 | 2 |
epithelial cell of sweat gland | 8.20e-08 | 2 |
epithelial cell of skin gland | 8.20e-08 | 2 |
acinar cell of sebaceous gland | 8.20e-08 | 2 |
amniotic epithelial cell | 9.75e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.20e-18 | 5 |
transitional epithelium | 1.75e-15 | 6 |
extraembryonic membrane | 7.43e-11 | 14 |
membranous layer | 7.43e-11 | 14 |
extraembryonic structure | 6.93e-10 | 24 |
chorion | 6.07e-08 | 7 |
skin gland | 8.20e-08 | 2 |
epidermis gland | 8.20e-08 | 2 |
gland of integumental system | 8.20e-08 | 2 |
sebaceous gland | 8.20e-08 | 2 |
skin sebaceous gland | 8.20e-08 | 2 |
sweat gland | 8.20e-08 | 2 |
sweat gland placode | 8.20e-08 | 2 |
sebaceous gland placode | 8.20e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.