FFCP PHASE1:Hg19::chr12:105478339..105478361,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!2.51e-34!180;CL:0000057!1.47e-20!75;CL:0000680!6.67e-13!57;CL:0000056!6.67e-13!57;CL:0000355!6.67e-13!57;CL:0000187!1.48e-12!54;CL:0000393!2.26e-11!60;CL:0000211!2.26e-11!60;CL:0002620!9.99e-11!23;CL:0000183!2.65e-10!59;CL:0000192!4.04e-09!42;CL:0000514!4.04e-09!42;CL:0000359!1.61e-07!32 | |ontology_enrichment_celltype=CL:0000055!2.51e-34!180;CL:0000057!1.47e-20!75;CL:0000680!6.67e-13!57;CL:0000056!6.67e-13!57;CL:0000355!6.67e-13!57;CL:0000187!1.48e-12!54;CL:0000393!2.26e-11!60;CL:0000211!2.26e-11!60;CL:0002620!9.99e-11!23;CL:0000183!2.65e-10!59;CL:0000192!4.04e-09!42;CL:0000514!4.04e-09!42;CL:0000359!1.61e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.33e-11;23!CL:0000057;3.22e-09;73!CL:0000187;7.15e-08;55!CL:0000192;1.47e-07;43!CL:0000393;3.84e-07;61!CL:0000211;3.84e-07;61!CL:0000359;6.33e-07;32 | |ontology_enrichment_celltype_v019=CL:0002620;2.33e-11;23!CL:0000057;3.22e-09;73!CL:0000187;7.15e-08;55!CL:0000192;1.47e-07;43!CL:0000393;3.84e-07;61!CL:0000211;3.84e-07;61!CL:0000359;6.33e-07;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.69e-23,76;CL:0000680,9.99e-14,58;CL:0000056,9.99e-14,58;CL:0000355,9.99e-14,58;CL:0000187,2.38e-13,55;CL:0000393,6.62e-12,61;CL:0000211,6.62e-12,61;CL:0002620,1.97e-11,23;CL:0000192,1.16e-09,43;CL:0000514,1.16e-09,43;CL:0000359,2.19e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000355;1.02e-07;58!CL:0000514;1.47e-07;43 | |ontology_enrichment_development_v019=CL:0000355;1.02e-07;58!CL:0000514;1.47e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.17e-16!83;UBERON:0002329!2.17e-16!83;UBERON:0003077!2.17e-16!83;UBERON:0003059!2.17e-16!83;UBERON:0007282!2.17e-16!83;UBERON:0009618!2.17e-16!83;UBERON:0007285!2.17e-16!83;UBERON:0000475!1.19e-15!365;UBERON:0004290!6.37e-15!70;UBERON:0000486!2.20e-13!82;UBERON:0001134!4.15e-13!61;UBERON:0002036!4.15e-13!61;UBERON:0003082!4.15e-13!61;UBERON:0002385!6.99e-13!63;UBERON:0001015!6.99e-13!63;UBERON:0000383!6.99e-13!63;UBERON:0003102!4.48e-11!95;UBERON:0000481!2.58e-09!347;UBERON:0000468!4.00e-09!659;UBERON:0002100!5.62e-09!216;UBERON:0002199!1.07e-08!45;UBERON:0002416!1.07e-08!45;UBERON:0002097!8.77e-08!40;UBERON:0005256!3.92e-07!143 | |ontology_enrichment_uberon=UBERON:0000914!2.17e-16!83;UBERON:0002329!2.17e-16!83;UBERON:0003077!2.17e-16!83;UBERON:0003059!2.17e-16!83;UBERON:0007282!2.17e-16!83;UBERON:0009618!2.17e-16!83;UBERON:0007285!2.17e-16!83;UBERON:0000475!1.19e-15!365;UBERON:0004290!6.37e-15!70;UBERON:0000486!2.20e-13!82;UBERON:0001134!4.15e-13!61;UBERON:0002036!4.15e-13!61;UBERON:0003082!4.15e-13!61;UBERON:0002385!6.99e-13!63;UBERON:0001015!6.99e-13!63;UBERON:0000383!6.99e-13!63;UBERON:0003102!4.48e-11!95;UBERON:0000481!2.58e-09!347;UBERON:0000468!4.00e-09!659;UBERON:0002100!5.62e-09!216;UBERON:0002199!1.07e-08!45;UBERON:0002416!1.07e-08!45;UBERON:0002097!8.77e-08!40;UBERON:0005256!3.92e-07!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0002199;2.88e-07;46!UBERON:0002416;2.88e-07;46!UBERON:0002097;5.54e-07;41!UBERON:0001013;7.29e-07;14 | |ontology_enrichment_uberon_v019=UBERON:0002199;2.88e-07;46!UBERON:0002416;2.88e-07;46!UBERON:0002097;5.54e-07;41!UBERON:0001013;7.29e-07;14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,3.13e-16,73;UBERON:0003077,1.03e-15,72;UBERON:0007285,1.03e-15,72;UBERON:0002329,1.12e-15,71;UBERON:0003059,1.12e-15,71;UBERON:0007282,1.12e-15,71;UBERON:0004290,1.12e-15,71;UBERON:0009618,1.12e-15,71;UBERON:0001134,1.00e-13,62;UBERON:0002036,1.00e-13,62;UBERON:0003082,1.00e-13,62;UBERON:0002385,2.76e-13,64;UBERON:0001015,2.76e-13,64;UBERON:0000383,2.76e-13,64;UBERON:0000486,4.32e-13,83;UBERON:0007503,1.23e-12,78;UBERON:0002199,7.11e-10,46;UBERON:0002416,7.11e-10,46;UBERON:0003102,8.23e-10,99;UBERON:0002097,6.92e-09,41;UBERON:0005256,3.13e-07,122 | |||
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| ||
|short_description=p2@ALDH1L2 | |short_description=p2@ALDH1L2 | ||
}} | }} |
Revision as of 06:40, 18 November 2012
Short description: | p2@ALDH1L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ALDH1L2_5end |
Coexpression cluster: | C2179_Preadipocyte_myeloma_Fibroblast_Adipocyte_Multipotent_neurofibroma_Olfactory |
Association with transcript: | 0bp_to_ENST00000258494, ENST00000424857, NM_001034173, NR_027752, uc001tlc.2, uc009zup.2_5end |
EntrezGene: | ALDH1L2 |
HGNC: | 26777 |
UniProt: | Q3SY69B4DTU7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.69e-23 | 76 |
muscle precursor cell | 9.99e-14 | 58 |
myoblast | 9.99e-14 | 58 |
multi-potent skeletal muscle stem cell | 9.99e-14 | 58 |
muscle cell | 2.38e-13 | 55 |
electrically responsive cell | 6.62e-12 | 61 |
electrically active cell | 6.62e-12 | 61 |
skin fibroblast | 1.97e-11 | 23 |
smooth muscle cell | 1.16e-09 | 43 |
smooth muscle myoblast | 1.16e-09 | 43 |
vascular associated smooth muscle cell | 2.19e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 3.13e-16 | 73 |
paraxial mesoderm | 1.03e-15 | 72 |
presumptive paraxial mesoderm | 1.03e-15 | 72 |
somite | 1.12e-15 | 71 |
presomitic mesoderm | 1.12e-15 | 71 |
presumptive segmental plate | 1.12e-15 | 71 |
dermomyotome | 1.12e-15 | 71 |
trunk paraxial mesoderm | 1.12e-15 | 71 |
skeletal muscle tissue | 1.00e-13 | 62 |
striated muscle tissue | 1.00e-13 | 62 |
myotome | 1.00e-13 | 62 |
muscle tissue | 2.76e-13 | 64 |
musculature | 2.76e-13 | 64 |
musculature of body | 2.76e-13 | 64 |
multilaminar epithelium | 4.32e-13 | 83 |
epithelial vesicle | 1.23e-12 | 78 |
integument | 7.11e-10 | 46 |
integumental system | 7.11e-10 | 46 |
surface structure | 8.23e-10 | 99 |
skin of body | 6.92e-09 | 41 |
trunk mesenchyme | 3.13e-07 | 122 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.