FFCP PHASE1:Hg19::chr18:19612834..19612841,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!4.26e-29!254;CL:0000223!4.19e-16!59;CL:0002321!9.36e-14!248;CL:0000220!5.38e-13!246;CL:0002076!3.78e-12!43;CL:0000076!5.52e-11!62;CL:0002202!6.12e-08!9;CL:0002632!6.12e-08!9;CL:0000077!7.52e-08!19;CL:0002368!9.93e-08!13;CL:0002251!2.29e-07!21;CL:0002319!6.84e-07!25 | |ontology_enrichment_celltype=CL:0000066!4.26e-29!254;CL:0000223!4.19e-16!59;CL:0002321!9.36e-14!248;CL:0000220!5.38e-13!246;CL:0002076!3.78e-12!43;CL:0000076!5.52e-11!62;CL:0002202!6.12e-08!9;CL:0002632!6.12e-08!9;CL:0000077!7.52e-08!19;CL:0002368!9.93e-08!13;CL:0002251!2.29e-07!21;CL:0002319!6.84e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002202;7.88e-11;9!CL:0002632;7.88e-11;9!CL:0002368;2.03e-10;13!CL:0002076;3.68e-08;42 | |ontology_enrichment_celltype_v019=CL:0002202;7.88e-11;9!CL:0002632;7.88e-11;9!CL:0002368;2.03e-10;13!CL:0002076;3.68e-08;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.89e-11,253;CL:0002076,5.64e-11,42;CL:0002202,8.51e-11,9;CL:0002632,8.51e-11,9;CL:0002368,2.13e-10,13;CL:0000223,4.21e-10,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!1.25e-27!106;DOID:0050687!1.08e-25!143;DOID:14566!4.54e-23!239;DOID:162!9.68e-23!235;DOID:1749!7.77e-12!14;DOID:299!1.29e-09!25;DOID:7!2.33e-09!39 | |ontology_enrichment_disease=DOID:305!1.25e-27!106;DOID:0050687!1.08e-25!143;DOID:14566!4.54e-23!239;DOID:162!9.68e-23!235;DOID:1749!7.77e-12!14;DOID:299!1.29e-09!25;DOID:7!2.33e-09!39 | ||
|ontology_enrichment_disease_v019=DOID:299;5.76e-11;25!DOID:1749;2.22e-09;14!DOID:7;1.51e-07;39 | |ontology_enrichment_disease_v019=DOID:299;5.76e-11;25!DOID:1749;2.22e-09;14!DOID:7;1.51e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:305,4.25e-20,106;DOID:0050687,1.89e-14,143;DOID:162,5.13e-11,235;DOID:299,5.22e-11,25;DOID:14566,1.26e-10,239;DOID:1749,1.54e-09,14;DOID:7,5.20e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001048!2.76e-08!168;UBERON:0005911!8.54e-08!82;UBERON:0001007!9.99e-08!155;UBERON:0001555!9.99e-08!155;UBERON:0007026!9.99e-08!155;UBERON:0005157!1.10e-07!51;UBERON:0004119!2.94e-07!169;UBERON:0000925!2.94e-07!169;UBERON:0006595!2.94e-07!169;UBERON:0005177!4.75e-07!107;UBERON:0000344!4.84e-07!12 | |ontology_enrichment_uberon=UBERON:0001048!2.76e-08!168;UBERON:0005911!8.54e-08!82;UBERON:0001007!9.99e-08!155;UBERON:0001555!9.99e-08!155;UBERON:0007026!9.99e-08!155;UBERON:0005157!1.10e-07!51;UBERON:0004119!2.94e-07!169;UBERON:0000925!2.94e-07!169;UBERON:0006595!2.94e-07!169;UBERON:0005177!4.75e-07!107;UBERON:0000344!4.84e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0002394;2.04e-09;4!UBERON:0003928;2.04e-09;4!UBERON:0000485;6.48e-09;7 | |ontology_enrichment_uberon_v019=UBERON:0002394;2.04e-09;4!UBERON:0003928;2.04e-09;4!UBERON:0000485;6.48e-09;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,1.38e-09,82;UBERON:0004921,3.04e-09,118;UBERON:0001007,1.78e-08,145;UBERON:0001555,1.78e-08,145;UBERON:0007026,1.78e-08,145;UBERON:0004119,4.46e-08,160;UBERON:0000925,4.46e-08,160;UBERON:0006595,4.46e-08,160;UBERON:0000485,5.21e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,1.39560233594486,0,0,0,0,0,0,0,0,0.861847406537515,0.204000691244253,0,0,0.821246550437305,0.376627918784408,0,0,0,0,0,0,0,1.50602959389125,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,1.10864698731282,0.175669571386252,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.397227542439656,0,0,1.12135520028461,1.06748995729705,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0,0,0,0.386521706326594,0,0.286804595389004,0.365921118388786,0.397589304964456,0.116193942869518,0.414644220061482,0.504641701751257,0.72995471815166,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,1.59884970106048,0.686271241194102,0.219500570817251,0,0.100528972411631,0.277765335475589,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0.232420756919918,2.05461064305758,0.200506470303285,0,0,0,0,0,0,0.784349769176855,0,0.316654886678627,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0.154048617114644,0.460511024178389,0,0,0,0.0852266274161009,0,0,0.384380134730212,2.67986696238627,0,0,0,0,0.308033580176089,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,1.56989728039846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0.329294892959902,0,0,0.769776901804097,6.03272047982209,7.62236894029258,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0.485442086998054,0,2.27308917445131,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,2.69605053441981,0,0,0,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,1.593108275997,0.254253650292766,0.472775363535873,0,0,0,0,0,0,0,0,0,0.32681539055697,0.139423744278603,0,3.30431961956303,0.46112780877612,0.448788222048861,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,1.30586246527318,11.873658000451,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0.391329237864179,0.485560759068186,0,0,0,0,2.1045278718029,0.207376382794494,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,2.35059857767087,0,0.343972064943233,0,0.0730893170861856,0,0,0,0,1.91858694505451,0.596143835108969,0,0,0.64127056201227,0,0.19980960958213,6.19588793762656,1.03082936549324,0,2.0167671718341,0.49701014226173,0.235694034616795,6.7952103036807,6.79918501030166,0.611989305817931,0,0,0,0,0.859530882839914,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,1.16495949527454,0.0787831823072236,0.247247575143499,0.0674035438541849,0.196854963029498,0,0,0,1.28602518772015,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0.211200673038813,0,0.959575986597226,0,0,1.27134268827375,0,0.864221491201268,0,0,0.164185041498678,0,0,0,0,0,0,0.171086837884329,1.40963004463334,0,0,0,0.496166021811951,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,5.37415754237058,0.909894705249887,0,0,0,0,0.447764408660622,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0.318593534327405,0,0.776314784381297,0,0,0.521745061811734,0.150257608997218,0.761610424337591,0,0.181848659202559,0.644463342254931,0,1.19428766609585,0,0.686791410365586,0,0,0.770479321629213,2.78774068787403,0,0.226705925512272,0.926089897295336,0.489473409012935,0.179088841081487,0,0.877136198314828,0.353378291891762,1.15748422962549,0.337884881306145,0.76872455576384,0,0.303859956177382,0,0,0,0,0.327609848846413,0.491545817507439,5.4941152073243,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0.589848616738702,0.733714394086716,3.35024431835981,0,2.0710797781803,0,0,0.40341013740704,0,0.785720083444267,2.94789451518174,1.03499260351932,0,0,0,0,0,0,0,0,1.14986184875636,0,0,0,0,0,0,0.342976018874837,0,0,2.12748913591143,4.22679327189863,0,0,0.560544326627578,0,0.215927591218621,0,0,0,0,0.173858272302579,0,0,0,0,0,0.236664001461131,0,0,0.9164274741762,0,0,0.223710863595585,0.588901401691458,1.21917924982269,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2498775702396,3.88184358887261,0.240724100067505,0,0,0,0.157771562193185,0,0,0,0,0,0,0,2.95017044301978,0.633492505057185,0,0,0.0918948995348449,0,0.07577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| ||
|short_description=p@chr18:19612834..19612841,- | |short_description=p@chr18:19612834..19612841,- | ||
}} | }} |
Revision as of 02:27, 18 November 2012
Short description: | p@chr18:19612834..19612841, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:19612834..19612841, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.89e-11 | 253 |
endo-epithelial cell | 5.64e-11 | 42 |
epithelial cell of tracheobronchial tree | 8.51e-11 | 9 |
epithelial cell of lower respiratory tract | 8.51e-11 | 9 |
respiratory epithelial cell | 2.13e-10 | 13 |
endodermal cell | 4.21e-10 | 58 |
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 1.38e-09 | 82 |
subdivision of digestive tract | 3.04e-09 | 118 |
digestive system | 1.78e-08 | 145 |
digestive tract | 1.78e-08 | 145 |
primitive gut | 1.78e-08 | 145 |
endoderm-derived structure | 4.46e-08 | 160 |
endoderm | 4.46e-08 | 160 |
presumptive endoderm | 4.46e-08 | 160 |
simple columnar epithelium | 5.21e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.25e-20 | 106 |
cell type cancer | 1.89e-14 | 143 |
cancer | 5.13e-11 | 235 |
adenocarcinoma | 5.22e-11 | 25 |
disease of cellular proliferation | 1.26e-10 | 239 |
squamous cell carcinoma | 1.54e-09 | 14 |
disease of anatomical entity | 5.20e-08 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.