FFCP PHASE1:Hg19::chr4:41218683..41218708,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002139!2.57e-15!24;CL:0000115!4.65e-15!35;CL:0000071!1.76e-11!18;CL:0002546!1.76e-11!18;CL:0000222!5.29e-11!119;CL:0002078!6.22e-10!44;CL:0000213!7.94e-10!57;CL:0000215!7.94e-10!57 | |ontology_enrichment_celltype=CL:0002139!2.57e-15!24;CL:0000115!4.65e-15!35;CL:0000071!1.76e-11!18;CL:0002546!1.76e-11!18;CL:0000222!5.29e-11!119;CL:0002078!6.22e-10!44;CL:0000213!7.94e-10!57;CL:0000215!7.94e-10!57 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.80e-28;24!CL:0000115;5.50e-24;36!CL:0000071;5.74e-21;18!CL:0002078;1.46e-15;45!CL:0000213;2.83e-10;58!CL:0000215;2.83e-10;58!CL:1000413;7.07e-10;9!CL:0002543;1.10e-09;6!CL:0002138;4.47e-09;6!CL:0002544;1.98e-07;6 | |ontology_enrichment_celltype_v019=CL:0002139;1.80e-28;24!CL:0000115;5.50e-24;36!CL:0000071;5.74e-21;18!CL:0002078;1.46e-15;45!CL:0000213;2.83e-10;58!CL:0000215;2.83e-10;58!CL:1000413;7.07e-10;9!CL:0002543;1.10e-09;6!CL:0002138;4.47e-09;6!CL:0002544;1.98e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.99e-29,36;CL:0002139,1.48e-28,24;CL:0002078,6.41e-23,45;CL:0000071,5.25e-21,18;CL:0002546,5.25e-21,18;CL:0000213,1.43e-16,58;CL:0000215,1.43e-16,58;CL:0000222,2.29e-11,121;CL:1000413,9.58e-10,9;CL:0002543,1.16e-09,6;CL:0005020,4.02e-09,6;CL:0002138,4.02e-09,6;CL:0005022,4.02e-09,6;CL:0002544,1.74e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;5.74e-21;18!CL:0005022;4.47e-09;6 | |ontology_enrichment_development_v019=CL:0002546;5.74e-21;18!CL:0005022;4.47e-09;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.07e-16!79;UBERON:0007798!1.07e-16!79;UBERON:0000055!2.32e-16!69;UBERON:0001981!4.85e-15!60;UBERON:0007500!4.85e-15!60;UBERON:0004537!4.85e-15!60;UBERON:0006965!4.85e-15!60;UBERON:0000477!1.84e-14!286;UBERON:0004872!2.70e-14!84;UBERON:0000468!3.49e-14!659;UBERON:0004111!1.50e-13!241;UBERON:0000467!6.08e-13!625;UBERON:0000480!1.00e-12!626;UBERON:0001009!1.31e-12!113;UBERON:0004535!7.00e-12!110;UBERON:0000025!1.20e-11!194;UBERON:0001986!1.76e-11!18;UBERON:0004638!1.76e-11!18;UBERON:0004852!1.76e-11!18;UBERON:0003914!5.32e-11!118;UBERON:0000487!1.68e-09!22;UBERON:0002050!5.79e-08!605;UBERON:0005423!5.79e-08!605;UBERON:0000923!1.11e-07!604;UBERON:0005291!1.11e-07!604;UBERON:0006598!1.11e-07!604;UBERON:0002532!1.11e-07!604;UBERON:0000475!2.19e-07!365;UBERON:0000922!2.19e-07!612;UBERON:0000483!3.77e-07!309;UBERON:0006914!4.30e-07!25;UBERON:0000119!4.65e-07!312;UBERON:0007023!6.96e-07!115 | |ontology_enrichment_uberon=UBERON:0002049!1.07e-16!79;UBERON:0007798!1.07e-16!79;UBERON:0000055!2.32e-16!69;UBERON:0001981!4.85e-15!60;UBERON:0007500!4.85e-15!60;UBERON:0004537!4.85e-15!60;UBERON:0006965!4.85e-15!60;UBERON:0000477!1.84e-14!286;UBERON:0004872!2.70e-14!84;UBERON:0000468!3.49e-14!659;UBERON:0004111!1.50e-13!241;UBERON:0000467!6.08e-13!625;UBERON:0000480!1.00e-12!626;UBERON:0001009!1.31e-12!113;UBERON:0004535!7.00e-12!110;UBERON:0000025!1.20e-11!194;UBERON:0001986!1.76e-11!18;UBERON:0004638!1.76e-11!18;UBERON:0004852!1.76e-11!18;UBERON:0003914!5.32e-11!118;UBERON:0000487!1.68e-09!22;UBERON:0002050!5.79e-08!605;UBERON:0005423!5.79e-08!605;UBERON:0000923!1.11e-07!604;UBERON:0005291!1.11e-07!604;UBERON:0006598!1.11e-07!604;UBERON:0002532!1.11e-07!604;UBERON:0000475!2.19e-07!365;UBERON:0000922!2.19e-07!612;UBERON:0000483!3.77e-07!309;UBERON:0006914!4.30e-07!25;UBERON:0000119!4.65e-07!312;UBERON:0007023!6.96e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.74e-21;18!UBERON:0001986;5.74e-21;18!UBERON:0004852;5.74e-21;18!UBERON:0000487;6.18e-18;22!UBERON:0006914;4.89e-15;25!UBERON:0000055;7.31e-12;65!UBERON:0007500;1.39e-10;56!UBERON:0001981;1.39e-10;56!UBERON:0004537;1.39e-10;56!UBERON:0000490;2.52e-10;33!UBERON:0001638;3.40e-10;9!UBERON:0003920;3.40e-10;9!UBERON:0004582;3.40e-10;9!UBERON:0003915;7.07e-10;9!UBERON:0004700;7.07e-10;9!UBERON:0001917;7.07e-10;9!UBERON:0002049;1.32e-08;75!UBERON:0007798;1.32e-08;75!UBERON:0000947;3.02e-07;21!UBERON:0010191;3.02e-07;21!UBERON:0001009;3.85e-07;112!UBERON:0004535;7.18e-07;109 | |ontology_enrichment_uberon_v019=UBERON:0004638;5.74e-21;18!UBERON:0001986;5.74e-21;18!UBERON:0004852;5.74e-21;18!UBERON:0000487;6.18e-18;22!UBERON:0006914;4.89e-15;25!UBERON:0000055;7.31e-12;65!UBERON:0007500;1.39e-10;56!UBERON:0001981;1.39e-10;56!UBERON:0004537;1.39e-10;56!UBERON:0000490;2.52e-10;33!UBERON:0001638;3.40e-10;9!UBERON:0003920;3.40e-10;9!UBERON:0004582;3.40e-10;9!UBERON:0003915;7.07e-10;9!UBERON:0004700;7.07e-10;9!UBERON:0001917;7.07e-10;9!UBERON:0002049;1.32e-08;75!UBERON:0007798;1.32e-08;75!UBERON:0000947;3.02e-07;21!UBERON:0010191;3.02e-07;21!UBERON:0001009;3.85e-07;112!UBERON:0004535;7.18e-07;109 | ||
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| ||
|short_description=p7@APBB2 | |short_description=p7@APBB2 | ||
}} | }} |
Revision as of 15:51, 17 November 2012
Short description: | p7@APBB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_APBB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000502682_5end |
EntrezGene: | APBB2 |
HGNC: | 582 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.99e-29 | 36 |
endothelial cell of vascular tree | 1.48e-28 | 24 |
meso-epithelial cell | 6.41e-23 | 45 |
blood vessel endothelial cell | 5.25e-21 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.25e-21 | 18 |
lining cell | 1.43e-16 | 58 |
barrier cell | 1.43e-16 | 58 |
mesodermal cell | 2.29e-11 | 121 |
endothelial cell of artery | 9.58e-10 | 9 |
vein endothelial cell | 1.16e-09 | 6 |
lymphangioblast | 4.02e-09 | 6 |
endothelial cell of lymphatic vessel | 4.02e-09 | 6 |
vascular lymphangioblast | 4.02e-09 | 6 |
aortic endothelial cell | 1.74e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
vessel | 8.31e-25 | 68 |
vasculature | 3.96e-22 | 78 |
vascular system | 3.96e-22 | 78 |
blood vessel endothelium | 5.25e-21 | 18 |
endothelium | 5.25e-21 | 18 |
cardiovascular system endothelium | 5.25e-21 | 18 |
epithelial tube open at both ends | 1.71e-20 | 59 |
blood vessel | 1.71e-20 | 59 |
blood vasculature | 1.71e-20 | 59 |
vascular cord | 1.71e-20 | 59 |
simple squamous epithelium | 3.70e-18 | 22 |
splanchnic layer of lateral plate mesoderm | 2.98e-17 | 83 |
circulatory system | 1.21e-16 | 112 |
cardiovascular system | 9.25e-16 | 109 |
squamous epithelium | 3.15e-15 | 25 |
epithelial tube | 6.34e-12 | 117 |
vein | 5.89e-10 | 9 |
venous blood vessel | 5.89e-10 | 9 |
venous system | 5.89e-10 | 9 |
endothelial tube | 9.58e-10 | 9 |
arterial system endothelium | 9.58e-10 | 9 |
endothelium of artery | 9.58e-10 | 9 |
lateral plate mesoderm | 1.73e-09 | 203 |
anatomical conduit | 8.44e-09 | 240 |
tube | 1.77e-08 | 192 |
artery | 2.15e-07 | 42 |
arterial blood vessel | 2.15e-07 | 42 |
arterial system | 2.15e-07 | 42 |
aorta | 2.17e-07 | 21 |
aortic system | 2.17e-07 | 21 |
mesoderm | 7.53e-07 | 315 |
mesoderm-derived structure | 7.53e-07 | 315 |
presumptive mesoderm | 7.53e-07 | 315 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.