FFCP PHASE1:Hg19::chr18:59139576..59139586,+: Difference between revisions
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|ontology_enrichment_celltype_v019=CL:0002605;1.23e-38;3!CL:0002319;2.00e-26;25!CL:0000540;8.63e-20;6!CL:0000404;8.63e-20;6!CL:0000128;3.15e-17;7!CL:0000126;3.15e-17;7!CL:0000127;3.15e-17;7!CL:0000047;2.37e-15;2!CL:0000306;1.70e-08;4!CL:0002222;1.70e-08;4!CL:0002224;1.70e-08;4!CL:0000243;1.13e-07;15!CL:0000125;1.13e-07;15!CL:0000095;5.83e-07;17!CL:0002322;6.39e-07;5 | |ontology_enrichment_celltype_v019=CL:0002605;1.23e-38;3!CL:0002319;2.00e-26;25!CL:0000540;8.63e-20;6!CL:0000404;8.63e-20;6!CL:0000128;3.15e-17;7!CL:0000126;3.15e-17;7!CL:0000127;3.15e-17;7!CL:0000047;2.37e-15;2!CL:0000306;1.70e-08;4!CL:0002222;1.70e-08;4!CL:0002224;1.70e-08;4!CL:0000243;1.13e-07;15!CL:0000125;1.13e-07;15!CL:0000095;5.83e-07;17!CL:0002322;6.39e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.01e-38,3;CL:0000047,3.36e-32,8;CL:0002319,2.00e-26,25;CL:0000540,1.04e-19,6;CL:0000031,1.04e-19,6;CL:0000404,1.04e-19,6;CL:0000128,2.90e-17,7;CL:0000126,2.90e-17,7;CL:0000127,2.90e-17,7;CL:0002453,2.90e-17,7;CL:0000133,6.77e-17,59;CL:0000221,5.58e-14,72;CL:0000306,1.70e-08,4;CL:0002222,1.70e-08,4;CL:0002224,1.70e-08,4;CL:0000243,1.09e-07,15;CL:0000125,1.09e-07,15;CL:0000030,1.09e-07,15;CL:0000339,1.09e-07,15;CL:0000095,5.66e-07,17;CL:0000123,5.66e-07,17;CL:0002322,6.39e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000031;8.63e-20;6!CL:0000133;1.35e-08;59!CL:0000339;1.13e-07;15 | |ontology_enrichment_development_v019=CL:0000031;8.63e-20;6!CL:0000133;1.35e-08;59!CL:0000339;1.13e-07;15 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0010077;1.70e-08;4!UBERON:0005389;1.70e-08;4!UBERON:0000484;1.70e-08;4!UBERON:0000965;1.70e-08;4!UBERON:0001803;1.70e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0010077;1.70e-08;4!UBERON:0005389;1.70e-08;4!UBERON:0000484;1.70e-08;4!UBERON:0000965;1.70e-08;4!UBERON:0001803;1.70e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.51e-09,81;UBERON:0010077,1.70e-08,4;UBERON:0005389,1.70e-08,4;UBERON:0000484,1.70e-08,4;UBERON:0002546,1.70e-08,4;UBERON:0000965,1.70e-08,4;UBERON:0001803,1.70e-08,4;UBERON:0003073,1.70e-08,4;UBERON:0005426,1.70e-08,4;UBERON:0001016,5.21e-08,89 | |||
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|short_description=p@chr18:59139576..59139586,+ | |short_description=p@chr18:59139576..59139586,+ | ||
}} | }} |
Revision as of 12:41, 17 November 2012
Short description: | p@chr18:59139576..59139586, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:59139576..59139586, + |
Coexpression cluster: | C1801_Lens_Astrocyte_Neural_Neurons_H9_eye_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.01e-38 | 3 |
neuronal stem cell | 3.36e-32 | 8 |
neural cell | 2.00e-26 | 25 |
neuron | 1.04e-19 | 6 |
neuroblast | 1.04e-19 | 6 |
electrically signaling cell | 1.04e-19 | 6 |
oligodendrocyte | 2.90e-17 | 7 |
macroglial cell | 2.90e-17 | 7 |
astrocyte | 2.90e-17 | 7 |
oligodendrocyte precursor cell | 2.90e-17 | 7 |
neurectodermal cell | 6.77e-17 | 59 |
ectodermal cell | 5.58e-14 | 72 |
crystallin accumulating cell | 1.70e-08 | 4 |
vertebrate lens cell | 1.70e-08 | 4 |
lens epithelial cell | 1.70e-08 | 4 |
glial cell (sensu Vertebrata) | 1.09e-07 | 15 |
glial cell | 1.09e-07 | 15 |
glioblast | 1.09e-07 | 15 |
glioblast (sensu Vertebrata) | 1.09e-07 | 15 |
neuron associated cell | 5.66e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 5.66e-07 | 17 |
embryonic stem cell | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.51e-09 | 81 |
cuboidal epithelium | 1.70e-08 | 4 |
transparent eye structure | 1.70e-08 | 4 |
simple cuboidal epithelium | 1.70e-08 | 4 |
cranial placode | 1.70e-08 | 4 |
lens of camera-type eye | 1.70e-08 | 4 |
epithelium of lens | 1.70e-08 | 4 |
lens placode | 1.70e-08 | 4 |
lens vesicle | 1.70e-08 | 4 |
nervous system | 5.21e-08 | 89 |
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