FFCP PHASE1:Hg19::chr19:4540109..4540116,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000763!5.42e-17!112;CL:0000049!5.42e-17!112;CL:0000988!1.11e-14!182;CL:0002032!2.33e-14!165;CL:0000837!2.33e-14!165;CL:0000037!6.87e-14!172;CL:0000566!6.87e-14!172;CL:0000766!6.45e-07!76 | |ontology_enrichment_celltype=CL:0000763!5.42e-17!112;CL:0000049!5.42e-17!112;CL:0000988!1.11e-14!182;CL:0002032!2.33e-14!165;CL:0000837!2.33e-14!165;CL:0000037!6.87e-14!172;CL:0000566!6.87e-14!172;CL:0000766!6.45e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000775;8.46e-09;3!CL:0000182;9.56e-07;12 | |ontology_enrichment_celltype_v019=CL:0000775;8.46e-09;3!CL:0000182;9.56e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.12e-14,108;CL:0000049,1.12e-14,108;CL:0000988,1.68e-10,177;CL:0002032,1.17e-09,161;CL:0000837,1.17e-09,161;CL:0000775,5.97e-09,3;CL:0000037,6.47e-09,168;CL:0000182,9.87e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.24e-09;11!UBERON:0009497;5.36e-08;13 | |ontology_enrichment_development_v019=UBERON:0004161;1.24e-09;11!UBERON:0009497;5.36e-08;13 | ||
|ontology_enrichment_disease=DOID:8692!7.51e-17!31;DOID:2531!2.64e-16!51;DOID:0060083!2.64e-16!51;DOID:1240!1.21e-15!39 | |ontology_enrichment_disease=DOID:8692!7.51e-17!31;DOID:2531!2.64e-16!51;DOID:0060083!2.64e-16!51;DOID:1240!1.21e-15!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;6.45e-32;31!DOID:1240;1.04e-24;39!DOID:2531;1.72e-16;51!DOID:0060083;1.72e-16;51!DOID:1036;9.88e-08;8 | |ontology_enrichment_disease_v019=DOID:8692;6.45e-32;31!DOID:1240;1.04e-24;39!DOID:2531;1.72e-16;51!DOID:0060083;1.72e-16;51!DOID:1036;9.88e-08;8 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,7.25e-33,31;DOID:1240,2.08e-30,39;DOID:2531,6.03e-24,51;DOID:0060083,6.03e-24,51;DOID:0050686,4.02e-09,137;DOID:1036,8.05e-08,8;DOID:162,4.75e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0002193!7.98e-11!112;UBERON:0007023!4.71e-10!115;UBERON:0000178!1.17e-09!15;UBERON:0000179!1.17e-09!15;UBERON:0000463!1.17e-09!15;UBERON:0002390!1.40e-09!102;UBERON:0003061!1.40e-09!102;UBERON:0002405!8.95e-08!115 | |ontology_enrichment_uberon=UBERON:0002193!7.98e-11!112;UBERON:0007023!4.71e-10!115;UBERON:0000178!1.17e-09!15;UBERON:0000179!1.17e-09!15;UBERON:0000463!1.17e-09!15;UBERON:0002390!1.40e-09!102;UBERON:0003061!1.40e-09!102;UBERON:0002405!8.95e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.08e-16;15!UBERON:0000179;3.08e-16;15!UBERON:0000463;3.08e-16;15!UBERON:0002365;3.65e-07;31!UBERON:0002330;3.65e-07;31!UBERON:0002107;7.19e-07;19!UBERON:0006925;7.19e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.08e-16;15!UBERON:0000179;3.08e-16;15!UBERON:0000463;3.08e-16;15!UBERON:0002365;3.65e-07;31!UBERON:0002330;3.65e-07;31!UBERON:0002107;7.19e-07;19!UBERON:0006925;7.19e-07;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.17e-16,15;UBERON:0000179,4.17e-16,15;UBERON:0000463,4.17e-16,15;UBERON:0002365,2.08e-07,31;UBERON:0002330,2.08e-07,31;UBERON:0002107,6.74e-07,19;UBERON:0006925,6.74e-07,19;UBERON:0008836,6.74e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.985207073399349,0.865818594450472,0.393364276848904,0.383829398097213,0.154816123316076,0.919421224478927,0.6024118375565,0,0.154934401160603,0.284338464974843,0.587200878669695,1.10799081706375,0.200544447470142,0.217010870715852,0,0,0,0,0.377875943688809,0,1.16214518452842,0.411167888021826,0.619412741790207,1.1507695692886,0,1.89185783910868,0,0,0,0.564727018627814,0.272906150057846,0.449446968890169,0.306083892370903,0.320929027076094,0,2.30895910130701,0.997318288108159,0.852449501065388,0,0,0,0.502497330513487,0.521482918420201,0.434377689410233,0,0,0.316462387440884,0.211255286311942,0,0.419317291016752,0.786300418025466,0.750884464207532,0.48217676009124,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0.167186495390678,0.32592226663359,0,0,0.445641827540694,0.294605907474837,0,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0,0,0.196468613246569,0,0.370784442784429,0.324547393654683,0.348259474598534,0.26591592103773,0,0,0,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0.66944122552934,0.805658634218294,0,0,0,0,0,0,0.112611480483322,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,0.121973706129595,0.265059536642971,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,4.91413608338813,1.77236972004421,0,0.368965315629341,0,0,0,0.703702806881416,0.0925884451585296,0,0,0,0,0,1.15493158208859,0.925971025153221,1.90254152234598,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0.215627574859517,0,0,0,0,0,0,2.99602809578873,2.99161459204025,4.14415513436035,0.736148950314839,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0.862856803274467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0.576570202095319,0.638063562472921,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,0,0,0.753150406214233,0.43050537267123,0,1.33029046061003,2.52695740227655,4.05958087385735,2.29391162142713,1.13929437434833,0.714695326373367,0.822724546172388,5.18778648954174,2.16012574895246,1.58625035258854,0,0.962479855263359,0.735120647943095,0,0,0,0.159426272728822,1.39705560002972,1.1490322207942,0.423347165447766,0,9.26630687774414,0.228234679033192,1.72347885350326,5.01268954180134,0,0.642352300414798,2.82519590067467,4.68430861459359,6.87010689511529,7.06653757909453,9.39439653148147,8.67615536901924,5.47086667125713,0.556812347790485,0,0,3.3307196799782,1.4098700508785,2.61996756571508,0.439524537815682,0,6.79804644092618,0,0,0,0,0,0.140669416410513,0,4.77931235257603,0,0.597743964753209,0.276283915531148,0,0,0.861593638227486,0,0.179736702294654,0.537063524026827,3.06943422136123,0.789147245095469,2.3948309234694,0,0,0.0927680981618513,0,0.260427761085233,0,1.44999915086959,0.455173793141999,2.03402920234213,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.538651809526579,0,0.23056390438806,1.88491053260521,0.217294743844016,0,0.0915975934018623,0,0,0.156980256395025,4.32150372940407,1.57916962432026,1.56850027454192,2.3495022176618,2.27704479269022,2.54298526368606,0.210998064528027,1.14262965711403,0,0.216388639742091,0.995261931078505,0.796118080530053,1.22206028986725,5.33738031625119,11.6150102609713,11.2775705465892,0.067401132980677,0.802577647298789,0,0.364909578431332,0.782658475728359,0,3.15667522279512,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,1.99226682220855,0,0,0.587954384486266,0,0.698906672968121,0,0,0.0730893170861856,0,0.581934098930517,0,0,0,0,0,0.977756913674015,0,1.70762395791482,0,0,0,0.171594997861965,0,0.248505071130865,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,1.8402114799552,0,0,0,0,0,0.223171457441873,0.201550417460179,0,1.16495949527454,1.18174773460835,1.2362378757175,1.28066733322951,0.492137407573744,0.423366660328922,0.795229689809303,0.272406812223151,0,0.137539436597234,0,0.2249738915515,0,0,0,0.551639951094387,0.367182116944987,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0.679872549120754,1.61207457045891,1.32506888912221,0,0.13223260174269,0,5.63852017853338,1.17466153824464,0.943225830597996,0,0,0.988058159489721,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0.231522474323834,0,0,1.54400723580486,0,0,0.192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| ||
|short_description=p3@LRG1 | |short_description=p3@LRG1 | ||
}} | }} |
Revision as of 12:07, 17 November 2012
Short description: | p3@LRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LRG1_5end |
Coexpression cluster: | NA |
Association with transcript: | -61bp_to_ENST00000538589_5end |
EntrezGene: | LRG1 |
HGNC: | 29480 |
UniProt: | B4E1I8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.12e-14 | 108 |
common myeloid progenitor | 1.12e-14 | 108 |
hematopoietic cell | 1.68e-10 | 177 |
hematopoietic oligopotent progenitor cell | 1.17e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.17e-09 | 161 |
neutrophil | 5.97e-09 | 3 |
hematopoietic stem cell | 6.47e-09 | 168 |
hepatocyte | 9.87e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
blood | 4.17e-16 | 15 |
haemolymphatic fluid | 4.17e-16 | 15 |
organism substance | 4.17e-16 | 15 |
exocrine gland | 2.08e-07 | 31 |
exocrine system | 2.08e-07 | 31 |
liver | 6.74e-07 | 19 |
digestive gland | 6.74e-07 | 19 |
liver bud | 6.74e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.25e-33 | 31 |
leukemia | 2.08e-30 | 39 |
hematologic cancer | 6.03e-24 | 51 |
immune system cancer | 6.03e-24 | 51 |
organ system cancer | 4.02e-09 | 137 |
chronic leukemia | 8.05e-08 | 8 |
cancer | 4.75e-07 | 235 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.