FFCP PHASE1:Hg19::chr1:26317408..26317429,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000791!2.58e-26!18;CL:0000789!2.58e-26!18;CL:0002420!2.58e-26!18;CL:0002419!2.58e-26!18;CL:0000790!2.58e-26!18;CL:0000084!1.08e-20!25;CL:0000827!1.08e-20!25;CL:0000625!9.37e-17!11;CL:0000738!1.17e-16!140;CL:0000037!2.82e-13!172;CL:0000566!2.82e-13!172;CL:0002274!2.35e-12!5;CL:0000457!2.35e-12!5;CL:0002191!2.35e-12!5;CL:0000097!2.35e-12!5;CL:0000831!2.35e-12!5;CL:0002028!2.35e-12!5;CL:0000988!5.84e-12!182;CL:0000838!8.20e-12!52;CL:0000542!1.70e-11!53;CL:0000051!1.70e-11!53;CL:0002031!5.24e-10!124;CL:0000624!1.66e-09!6;CL:0000784!5.14e-09!3;CL:0002032!5.29e-09!165;CL:0000837!5.29e-09!165;CL:0002087!6.82e-09!119;CL:0000767!2.15e-08!3;CL:0000623!2.37e-08!3;CL:0000825!2.37e-08!3;CL:0000842!8.85e-08!3;CL:0000898!1.82e-07!3 | |ontology_enrichment_celltype=CL:0000791!2.58e-26!18;CL:0000789!2.58e-26!18;CL:0002420!2.58e-26!18;CL:0002419!2.58e-26!18;CL:0000790!2.58e-26!18;CL:0000084!1.08e-20!25;CL:0000827!1.08e-20!25;CL:0000625!9.37e-17!11;CL:0000738!1.17e-16!140;CL:0000037!2.82e-13!172;CL:0000566!2.82e-13!172;CL:0002274!2.35e-12!5;CL:0000457!2.35e-12!5;CL:0002191!2.35e-12!5;CL:0000097!2.35e-12!5;CL:0000831!2.35e-12!5;CL:0002028!2.35e-12!5;CL:0000988!5.84e-12!182;CL:0000838!8.20e-12!52;CL:0000542!1.70e-11!53;CL:0000051!1.70e-11!53;CL:0002031!5.24e-10!124;CL:0000624!1.66e-09!6;CL:0000784!5.14e-09!3;CL:0002032!5.29e-09!165;CL:0000837!5.29e-09!165;CL:0002087!6.82e-09!119;CL:0000767!2.15e-08!3;CL:0000623!2.37e-08!3;CL:0000825!2.37e-08!3;CL:0000842!8.85e-08!3;CL:0000898!1.82e-07!3 | ||
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|ontology_enrichment_celltype_v019_2=CL:0000784,1.91e-27,3;CL:0000625,7.87e-13,11;CL:0000767,1.78e-12,3;CL:0000738,4.84e-10,136;CL:0000084,1.37e-08,25;CL:0000827,1.37e-08,25;CL:0000791,6.61e-08,18;CL:0000789,6.61e-08,18;CL:0002420,6.61e-08,18;CL:0002419,6.61e-08,18;CL:0000790,6.61e-08,18;CL:0000451,6.99e-08,10;CL:0000037,1.10e-07,168;CL:0000097,1.13e-07,5;CL:0002028,1.13e-07,5;CL:0000988,3.58e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;7.72e-08;18 | |ontology_enrichment_development_v019=CL:0000790;7.72e-08;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!3.09e-10!4;UBERON:0005058!3.09e-10!4;UBERON:0009113!3.09e-10!4;UBERON:0003295!3.09e-10!4;UBERON:0005562!3.09e-10!4;UBERON:0004177!2.13e-08!7;UBERON:0002193!3.37e-07!112;UBERON:0003351!8.53e-07!6 | |ontology_enrichment_uberon=UBERON:0002370!3.09e-10!4;UBERON:0005058!3.09e-10!4;UBERON:0009113!3.09e-10!4;UBERON:0003295!3.09e-10!4;UBERON:0005562!3.09e-10!4;UBERON:0004177!2.13e-08!7;UBERON:0002193!3.37e-07!112;UBERON:0003351!8.53e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.13e-19;2!UBERON:0005058;3.13e-19;2!UBERON:0009113;3.13e-19;2!UBERON:0004177;3.13e-08;5!UBERON:0005057;3.13e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;3.13e-19;2!UBERON:0005058;3.13e-19;2!UBERON:0009113;3.13e-19;2!UBERON:0004177;3.13e-08;5!UBERON:0005057;3.13e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.45e-10,4;UBERON:0005058,4.45e-10,4;UBERON:0009113,4.45e-10,4;UBERON:0003295,4.45e-10,4;UBERON:0005562,4.45e-10,4;UBERON:0003351,5.42e-07,6 | |||
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| ||
|short_description=p5@PAFAH2 | |short_description=p5@PAFAH2 | ||
}} | }} |
Revision as of 11:31, 17 November 2012
Short description: | p5@PAFAH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_PAFAH2_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -101bp_to_DQ892796, DQ896043_5end |
EntrezGene: | PAFAH2 |
HGNC: | 8579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.91e-27 | 3 |
CD8-positive, alpha-beta T cell | 7.87e-13 | 11 |
basophil | 1.78e-12 | 3 |
leukocyte | 4.84e-10 | 136 |
T cell | 1.37e-08 | 25 |
pro-T cell | 1.37e-08 | 25 |
mature alpha-beta T cell | 6.61e-08 | 18 |
alpha-beta T cell | 6.61e-08 | 18 |
immature T cell | 6.61e-08 | 18 |
mature T cell | 6.61e-08 | 18 |
immature alpha-beta T cell | 6.61e-08 | 18 |
dendritic cell | 6.99e-08 | 10 |
hematopoietic stem cell | 1.10e-07 | 168 |
mast cell | 1.13e-07 | 5 |
basophil mast progenitor cell | 1.13e-07 | 5 |
hematopoietic cell | 3.58e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.45e-10 | 4 |
hemolymphoid system gland | 4.45e-10 | 4 |
thymic region | 4.45e-10 | 4 |
pharyngeal gland | 4.45e-10 | 4 |
thymus primordium | 4.45e-10 | 4 |
pharyngeal epithelium | 5.42e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.