FFCP PHASE1:Hg19::chr1:170632051..170632081,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!6.04e-33!180;CL:0000057!2.44e-27!75;CL:0002620!1.08e-14!23;CL:0000680!4.82e-14!57;CL:0000056!4.82e-14!57;CL:0000355!4.82e-14!57;CL:0000187!9.26e-13!54;CL:0000359!8.28e-11!32;CL:0000183!9.21e-11!59;CL:0000048!1.09e-10!430;CL:0000393!2.08e-10!60;CL:0000211!2.08e-10!60;CL:0000723!4.84e-10!436;CL:0000192!5.61e-10!42;CL:0000514!5.61e-10!42;CL:0000034!3.20e-09!444;CL:0002494!1.07e-08!16;CL:0002334!4.33e-08!12;CL:0002556!8.06e-07!6 | |ontology_enrichment_celltype=CL:0000055!6.04e-33!180;CL:0000057!2.44e-27!75;CL:0002620!1.08e-14!23;CL:0000680!4.82e-14!57;CL:0000056!4.82e-14!57;CL:0000355!4.82e-14!57;CL:0000187!9.26e-13!54;CL:0000359!8.28e-11!32;CL:0000183!9.21e-11!59;CL:0000048!1.09e-10!430;CL:0000393!2.08e-10!60;CL:0000211!2.08e-10!60;CL:0000723!4.84e-10!436;CL:0000192!5.61e-10!42;CL:0000514!5.61e-10!42;CL:0000034!3.20e-09!444;CL:0002494!1.07e-08!16;CL:0002334!4.33e-08!12;CL:0002556!8.06e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002620;9.15e-12;23!CL:0002539;4.75e-11;10!CL:0000359;5.50e-11;32!CL:0000569;1.29e-10;4!CL:0000057;1.97e-10;73!CL:0002551;2.44e-09;6!CL:0002494;2.97e-08;16!CL:0002552;4.76e-08;5!CL:0000192;2.64e-07;43!CL:0002573;3.08e-07;2!CL:0002556;3.97e-07;6 | |ontology_enrichment_celltype_v019=CL:0002620;9.15e-12;23!CL:0002539;4.75e-11;10!CL:0000359;5.50e-11;32!CL:0000569;1.29e-10;4!CL:0000057;1.97e-10;73!CL:0002551;2.44e-09;6!CL:0002494;2.97e-08;16!CL:0002552;4.76e-08;5!CL:0000192;2.64e-07;43!CL:0002573;3.08e-07;2!CL:0002556;3.97e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.69e-19,76;CL:0002620,1.18e-11,23;CL:0000359,1.61e-11,32;CL:0002539,3.41e-11,10;CL:0000569,1.02e-10,4;CL:0000011,1.02e-10,4;CL:0000048,1.28e-09,427;CL:0002551,1.84e-09,6;CL:0000723,2.89e-09,433;CL:0000192,6.90e-09,43;CL:0000514,6.90e-09,43;CL:0000034,8.26e-09,441;CL:0002494,2.53e-08,16;CL:0002552,7.85e-08,5;CL:0002573,3.14e-07,2;CL:0000187,3.59e-07,55;CL:0002556,4.29e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000011;1.29e-10;4!CL:0000514;2.64e-07;43 | |ontology_enrichment_development_v019=CL:0000011;1.29e-10;4!CL:0000514;2.64e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.24e-21!83;UBERON:0002329!5.24e-21!83;UBERON:0003077!5.24e-21!83;UBERON:0003059!5.24e-21!83;UBERON:0007282!5.24e-21!83;UBERON:0009618!5.24e-21!83;UBERON:0007285!5.24e-21!83;UBERON:0004290!5.87e-18!70;UBERON:0000486!6.91e-15!82;UBERON:0001134!4.64e-14!61;UBERON:0002036!4.64e-14!61;UBERON:0003082!4.64e-14!61;UBERON:0003102!1.27e-13!95;UBERON:0002385!3.23e-13!63;UBERON:0001015!3.23e-13!63;UBERON:0000383!3.23e-13!63;UBERON:0004872!9.76e-12!84;UBERON:0002199!1.15e-11!45;UBERON:0002416!1.15e-11!45;UBERON:0002097!1.24e-11!40;UBERON:0001637!4.01e-11!42;UBERON:0003509!4.01e-11!42;UBERON:0004572!4.01e-11!42;UBERON:0004573!1.69e-09!33;UBERON:0004571!1.69e-09!33;UBERON:0000948!3.17e-08!24;UBERON:0005498!3.17e-08!24;UBERON:0004140!3.17e-08!24;UBERON:0009881!3.17e-08!24;UBERON:0004141!3.17e-08!24;UBERON:0003084!3.17e-08!24;UBERON:0007005!3.17e-08!24;UBERON:0004139!3.17e-08!24;UBERON:0004291!3.17e-08!24;UBERON:0005256!3.32e-08!143;UBERON:0000475!3.54e-08!365;UBERON:0001981!3.91e-07!60;UBERON:0007500!3.91e-07!60;UBERON:0004537!3.91e-07!60;UBERON:0006965!3.91e-07!60;UBERON:0001758!8.06e-07!6;UBERON:0003672!8.06e-07!6;UBERON:0007100!9.12e-07!27 | |ontology_enrichment_uberon=UBERON:0000914!5.24e-21!83;UBERON:0002329!5.24e-21!83;UBERON:0003077!5.24e-21!83;UBERON:0003059!5.24e-21!83;UBERON:0007282!5.24e-21!83;UBERON:0009618!5.24e-21!83;UBERON:0007285!5.24e-21!83;UBERON:0004290!5.87e-18!70;UBERON:0000486!6.91e-15!82;UBERON:0001134!4.64e-14!61;UBERON:0002036!4.64e-14!61;UBERON:0003082!4.64e-14!61;UBERON:0003102!1.27e-13!95;UBERON:0002385!3.23e-13!63;UBERON:0001015!3.23e-13!63;UBERON:0000383!3.23e-13!63;UBERON:0004872!9.76e-12!84;UBERON:0002199!1.15e-11!45;UBERON:0002416!1.15e-11!45;UBERON:0002097!1.24e-11!40;UBERON:0001637!4.01e-11!42;UBERON:0003509!4.01e-11!42;UBERON:0004572!4.01e-11!42;UBERON:0004573!1.69e-09!33;UBERON:0004571!1.69e-09!33;UBERON:0000948!3.17e-08!24;UBERON:0005498!3.17e-08!24;UBERON:0004140!3.17e-08!24;UBERON:0009881!3.17e-08!24;UBERON:0004141!3.17e-08!24;UBERON:0003084!3.17e-08!24;UBERON:0007005!3.17e-08!24;UBERON:0004139!3.17e-08!24;UBERON:0004291!3.17e-08!24;UBERON:0005256!3.32e-08!143;UBERON:0000475!3.54e-08!365;UBERON:0001981!3.91e-07!60;UBERON:0007500!3.91e-07!60;UBERON:0004537!3.91e-07!60;UBERON:0006965!3.91e-07!60;UBERON:0001758!8.06e-07!6;UBERON:0003672!8.06e-07!6;UBERON:0007100!9.12e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0004237;4.75e-11;10!UBERON:0004695;4.75e-11;10!UBERON:0002111;4.75e-11;10!UBERON:0004178;4.75e-11;10!UBERON:0004573;1.24e-10;33!UBERON:0004571;1.24e-10;33!UBERON:0002067;8.43e-09;9!UBERON:0002199;1.56e-07;46!UBERON:0002416;1.56e-07;46!UBERON:0001758;3.97e-07;6!UBERON:0003672;3.97e-07;6!UBERON:0001135;5.47e-07;15!UBERON:0002097;7.30e-07;41!UBERON:0002119;8.50e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0004237;4.75e-11;10!UBERON:0004695;4.75e-11;10!UBERON:0002111;4.75e-11;10!UBERON:0004178;4.75e-11;10!UBERON:0004573;1.24e-10;33!UBERON:0004571;1.24e-10;33!UBERON:0002067;8.43e-09;9!UBERON:0002199;1.56e-07;46!UBERON:0002416;1.56e-07;46!UBERON:0001758;3.97e-07;6!UBERON:0003672;3.97e-07;6!UBERON:0001135;5.47e-07;15!UBERON:0002097;7.30e-07;41!UBERON:0002119;8.50e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,2.87e-11,33;UBERON:0004571,2.87e-11,33;UBERON:0004237,3.41e-11,10;UBERON:0004695,3.41e-11,10;UBERON:0002111,3.41e-11,10;UBERON:0004178,3.41e-11,10;UBERON:0003102,4.28e-11,99;UBERON:0007524,4.86e-11,73;UBERON:0002199,2.06e-10,46;UBERON:0002416,2.06e-10,46;UBERON:0004872,2.20e-10,83;UBERON:0002329,2.57e-10,71;UBERON:0003059,2.57e-10,71;UBERON:0007282,2.57e-10,71;UBERON:0004290,2.57e-10,71;UBERON:0009618,2.57e-10,71;UBERON:0003077,4.26e-10,72;UBERON:0007285,4.26e-10,72;UBERON:0001637,2.32e-09,42;UBERON:0003509,2.32e-09,42;UBERON:0004572,2.32e-09,42;UBERON:0002097,3.95e-09,41;UBERON:0007503,6.64e-09,78;UBERON:0002067,7.08e-09,9;UBERON:0004016,7.08e-09,9;UBERON:0010083,7.08e-09,9;UBERON:0000486,4.74e-08,83;UBERON:0001758,4.29e-07,6;UBERON:0003672,4.29e-07,6;UBERON:0001135,4.44e-07,15;UBERON:0002119,8.56e-07,4 | |||
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| ||
|short_description=p16@PRRX1 | |short_description=p16@PRRX1 | ||
}} | }} |
Revision as of 04:58, 17 November 2012
Short description: | p16@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_PRRX1_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | 182bp_to_ENST00000553786_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | G3V4R6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.69e-19 | 76 |
skin fibroblast | 1.18e-11 | 23 |
vascular associated smooth muscle cell | 1.61e-11 | 32 |
aortic smooth muscle cell | 3.41e-11 | 10 |
cardiac mesenchymal cell | 1.02e-10 | 4 |
migratory trunk neural crest cell | 1.02e-10 | 4 |
multi fate stem cell | 1.28e-09 | 427 |
fibroblast of dermis | 1.84e-09 | 6 |
somatic stem cell | 2.89e-09 | 433 |
smooth muscle cell | 6.90e-09 | 43 |
smooth muscle myoblast | 6.90e-09 | 43 |
stem cell | 8.26e-09 | 441 |
cardiocyte | 2.53e-08 | 16 |
fibroblast of gingiva | 7.85e-08 | 5 |
Schwann cell | 3.14e-07 | 2 |
muscle cell | 3.59e-07 | 55 |
fibroblast of periodontium | 4.29e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 2.87e-11 | 33 |
systemic arterial system | 2.87e-11 | 33 |
blood vessel smooth muscle | 3.41e-11 | 10 |
arterial system smooth muscle | 3.41e-11 | 10 |
artery smooth muscle tissue | 3.41e-11 | 10 |
aorta smooth muscle tissue | 3.41e-11 | 10 |
surface structure | 4.28e-11 | 99 |
dense mesenchyme tissue | 4.86e-11 | 73 |
integument | 2.06e-10 | 46 |
integumental system | 2.06e-10 | 46 |
splanchnic layer of lateral plate mesoderm | 2.20e-10 | 83 |
somite | 2.57e-10 | 71 |
presomitic mesoderm | 2.57e-10 | 71 |
presumptive segmental plate | 2.57e-10 | 71 |
dermomyotome | 2.57e-10 | 71 |
trunk paraxial mesoderm | 2.57e-10 | 71 |
paraxial mesoderm | 4.26e-10 | 72 |
presumptive paraxial mesoderm | 4.26e-10 | 72 |
artery | 2.32e-09 | 42 |
arterial blood vessel | 2.32e-09 | 42 |
arterial system | 2.32e-09 | 42 |
skin of body | 3.95e-09 | 41 |
epithelial vesicle | 6.64e-09 | 78 |
dermis | 7.08e-09 | 9 |
dermatome | 7.08e-09 | 9 |
future dermis | 7.08e-09 | 9 |
multilaminar epithelium | 4.74e-08 | 83 |
periodontium | 4.29e-07 | 6 |
dentition | 4.29e-07 | 6 |
smooth muscle tissue | 4.44e-07 | 15 |
left ovary | 8.56e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.