FFCP PHASE1:Hg19::chr3:171528227..171528298,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000766!9.33e-16!76;CL:0000557!1.04e-14!71;CL:0000839!1.18e-14!70;CL:0000763!5.01e-14!112;CL:0000049!5.01e-14!112;CL:0002139!2.24e-13!24;CL:0000115!6.65e-13!35;CL:0002194!1.73e-12!63;CL:0000576!1.73e-12!63;CL:0000040!1.73e-12!63;CL:0000559!1.73e-12!63;CL:0002009!5.73e-12!65;CL:0002057!8.36e-12!42;CL:0000860!2.67e-11!45;CL:0002078!1.78e-10!44;CL:0000071!4.77e-10!18;CL:0002546!4.77e-10!18;CL:0000213!6.18e-09!57;CL:0000215!6.18e-09!57 | |ontology_enrichment_celltype=CL:0000766!9.33e-16!76;CL:0000557!1.04e-14!71;CL:0000839!1.18e-14!70;CL:0000763!5.01e-14!112;CL:0000049!5.01e-14!112;CL:0002139!2.24e-13!24;CL:0000115!6.65e-13!35;CL:0002194!1.73e-12!63;CL:0000576!1.73e-12!63;CL:0000040!1.73e-12!63;CL:0000559!1.73e-12!63;CL:0002009!5.73e-12!65;CL:0002057!8.36e-12!42;CL:0000860!2.67e-11!45;CL:0002078!1.78e-10!44;CL:0000071!4.77e-10!18;CL:0002546!4.77e-10!18;CL:0000213!6.18e-09!57;CL:0000215!6.18e-09!57 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.21e-13;24!CL:0000473;2.08e-12;39!CL:0000234;2.08e-12;39!CL:0000860;3.43e-12;33!CL:0002057;3.43e-12;33!CL:0000115;2.33e-11;36!CL:0000071;4.88e-10;18!CL:0000576;9.41e-09;48!CL:0000766;1.10e-08;69!CL:0002078;1.49e-07;45 | |ontology_enrichment_celltype_v019=CL:0002139;2.21e-13;24!CL:0000473;2.08e-12;39!CL:0000234;2.08e-12;39!CL:0000860;3.43e-12;33!CL:0002057;3.43e-12;33!CL:0000115;2.33e-11;36!CL:0000071;4.88e-10;18!CL:0000576;9.41e-09;48!CL:0000766;1.10e-08;69!CL:0002078;1.49e-07;45 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.50e-16,72;CL:0000557,1.68e-15,67;CL:0000839,1.86e-15,66;CL:0000763,1.63e-14,108;CL:0000049,1.63e-14,108;CL:0000473,5.57e-14,48;CL:0000234,5.57e-14,48;CL:0002139,2.20e-13,24;CL:0002194,3.04e-13,59;CL:0000576,3.04e-13,59;CL:0000040,3.04e-13,59;CL:0000559,3.04e-13,59;CL:0000115,3.42e-13,36;CL:0002009,1.15e-12,61;CL:0000860,8.24e-12,42;CL:0002057,8.24e-12,42;CL:0002078,9.25e-11,45;CL:0000071,4.72e-10,18;CL:0002546,4.72e-10,18;CL:0000213,3.36e-09,58;CL:0000215,3.36e-09,58 | |||
|ontology_enrichment_development_v019=CL:0002546;4.88e-10;18!CL:0002057;4.05e-09;42 | |ontology_enrichment_development_v019=CL:0002546;4.88e-10;18!CL:0002057;4.05e-09;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!6.88e-14!115;UBERON:0004111!1.04e-13!241;UBERON:0000467!1.24e-12!625;UBERON:0003081!1.92e-12!216;UBERON:0000480!2.77e-12!626;UBERON:0002050!5.11e-12!605;UBERON:0005423!5.11e-12!605;UBERON:0002371!6.59e-12!80;UBERON:0000923!8.35e-12!604;UBERON:0005291!8.35e-12!604;UBERON:0006598!8.35e-12!604;UBERON:0002532!8.35e-12!604;UBERON:0007023!9.55e-12!115;UBERON:0000025!1.51e-11!194;UBERON:0000468!2.33e-11!659;UBERON:0000922!3.63e-11!612;UBERON:0002193!4.03e-11!112;UBERON:0001474!7.78e-11!86;UBERON:0000062!2.00e-10!511;UBERON:0001986!4.77e-10!18;UBERON:0004638!4.77e-10!18;UBERON:0004852!4.77e-10!18;UBERON:0000477!5.63e-10!286;UBERON:0002390!1.88e-09!102;UBERON:0003061!1.88e-09!102;UBERON:0004765!2.20e-09!101;UBERON:0001434!2.20e-09!101;UBERON:0001049!1.36e-07!57;UBERON:0005068!1.36e-07!57;UBERON:0006241!1.36e-07!57;UBERON:0007135!1.36e-07!57;UBERON:0000487!2.69e-07!22 | |ontology_enrichment_uberon=UBERON:0002405!6.88e-14!115;UBERON:0004111!1.04e-13!241;UBERON:0000467!1.24e-12!625;UBERON:0003081!1.92e-12!216;UBERON:0000480!2.77e-12!626;UBERON:0002050!5.11e-12!605;UBERON:0005423!5.11e-12!605;UBERON:0002371!6.59e-12!80;UBERON:0000923!8.35e-12!604;UBERON:0005291!8.35e-12!604;UBERON:0006598!8.35e-12!604;UBERON:0002532!8.35e-12!604;UBERON:0007023!9.55e-12!115;UBERON:0000025!1.51e-11!194;UBERON:0000468!2.33e-11!659;UBERON:0000922!3.63e-11!612;UBERON:0002193!4.03e-11!112;UBERON:0001474!7.78e-11!86;UBERON:0000062!2.00e-10!511;UBERON:0001986!4.77e-10!18;UBERON:0004638!4.77e-10!18;UBERON:0004852!4.77e-10!18;UBERON:0000477!5.63e-10!286;UBERON:0002390!1.88e-09!102;UBERON:0003061!1.88e-09!102;UBERON:0004765!2.20e-09!101;UBERON:0001434!2.20e-09!101;UBERON:0001049!1.36e-07!57;UBERON:0005068!1.36e-07!57;UBERON:0006241!1.36e-07!57;UBERON:0007135!1.36e-07!57;UBERON:0000487!2.69e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.88e-10;18!UBERON:0001986;4.88e-10;18!UBERON:0004852;4.88e-10;18!UBERON:0000487;3.24e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0004638;4.88e-10;18!UBERON:0001986;4.88e-10;18!UBERON:0004852;4.88e-10;18!UBERON:0000487;3.24e-07;22 | ||
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| ||
|short_description=p1@PLD1 | |short_description=p1@PLD1 | ||
}} | }} |
Revision as of 23:37, 16 November 2012
Short description: | p1@PLD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PLD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000340989, ENST00000342215, ENST00000351298, ENST00000356327, ENST00000440204, ENST00000460926, ENST00000498278, NM_001130081, NM_002662_5end |
EntrezGene: | PLD1 |
HGNC: | 9067 |
UniProt: | Q13393F8WBV7Q59EA4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.50e-16 | 72 |
granulocyte monocyte progenitor cell | 1.68e-15 | 67 |
myeloid lineage restricted progenitor cell | 1.86e-15 | 66 |
myeloid cell | 1.63e-14 | 108 |
common myeloid progenitor | 1.63e-14 | 108 |
defensive cell | 5.57e-14 | 48 |
phagocyte | 5.57e-14 | 48 |
endothelial cell of vascular tree | 2.20e-13 | 24 |
monopoietic cell | 3.04e-13 | 59 |
monocyte | 3.04e-13 | 59 |
monoblast | 3.04e-13 | 59 |
promonocyte | 3.04e-13 | 59 |
endothelial cell | 3.42e-13 | 36 |
macrophage dendritic cell progenitor | 1.15e-12 | 61 |
classical monocyte | 8.24e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.24e-12 | 42 |
meso-epithelial cell | 9.25e-11 | 45 |
blood vessel endothelial cell | 4.72e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.72e-10 | 18 |
lining cell | 3.36e-09 | 58 |
barrier cell | 3.36e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 2.94e-14 | 203 |
anatomical conduit | 1.06e-13 | 240 |
embryonic structure | 1.57e-12 | 564 |
bone marrow | 1.82e-12 | 76 |
germ layer | 2.12e-12 | 560 |
germ layer / neural crest | 2.12e-12 | 560 |
embryonic tissue | 2.12e-12 | 560 |
presumptive structure | 2.12e-12 | 560 |
germ layer / neural crest derived structure | 2.12e-12 | 560 |
epiblast (generic) | 2.12e-12 | 560 |
immune system | 2.78e-12 | 93 |
developing anatomical structure | 7.33e-12 | 581 |
hemolymphoid system | 1.58e-11 | 108 |
tube | 1.72e-11 | 192 |
adult organism | 1.92e-11 | 114 |
skeletal element | 1.95e-11 | 90 |
bone element | 2.88e-11 | 82 |
embryo | 4.62e-11 | 592 |
skeletal system | 4.43e-10 | 100 |
blood vessel endothelium | 4.72e-10 | 18 |
endothelium | 4.72e-10 | 18 |
cardiovascular system endothelium | 4.72e-10 | 18 |
hematopoietic system | 7.85e-10 | 98 |
blood island | 7.85e-10 | 98 |
neural tube | 2.04e-07 | 56 |
neural rod | 2.04e-07 | 56 |
future spinal cord | 2.04e-07 | 56 |
neural keel | 2.04e-07 | 56 |
simple squamous epithelium | 2.93e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.