FFCP PHASE1:Hg19::chr12:122296755..122296770,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000181!7.84e-08!12;CL:0000417!7.84e-08!12;CL:0000668!7.84e-08!12;CL:0000414!7.84e-08!12;CL:0000412!7.84e-08!12;CL:0000182!7.84e-08!12 | |ontology_enrichment_celltype=CL:0000181!7.84e-08!12;CL:0000417!7.84e-08!12;CL:0000668!7.84e-08!12;CL:0000414!7.84e-08!12;CL:0000412!7.84e-08!12;CL:0000182!7.84e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.97e-10;12!CL:0000153;7.86e-08;9!CL:0000447;7.86e-08;9!CL:0000327;2.83e-07;15 | |ontology_enrichment_celltype_v019=CL:0000182;1.97e-10;12!CL:0000153;7.86e-08;9!CL:0000447;7.86e-08;9!CL:0000327;2.83e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.91e-10,12;CL:0000153,6.69e-08,9;CL:0000447,6.69e-08,9;CL:0000327,2.50e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.26e-09;11!UBERON:0009497;3.35e-07;13!UBERON:0003104;8.45e-07;31 | |ontology_enrichment_development_v019=UBERON:0004161;9.26e-09;11!UBERON:0009497;3.35e-07;13!UBERON:0003104;8.45e-07;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.05e-12!19;UBERON:0006925!6.05e-12!19;UBERON:0008836!6.05e-12!19;UBERON:0007023!4.06e-11!115;UBERON:0009854!8.91e-11!23;UBERON:0005057!1.29e-10!26;UBERON:0008835!1.93e-10!22;UBERON:0003894!1.93e-10!22;UBERON:0009497!2.85e-10!25;UBERON:0000015!2.85e-10!25;UBERON:0002423!2.85e-10!25;UBERON:0006235!2.85e-10!25;UBERON:0004161!2.85e-10!25;UBERON:0000481!9.30e-10!347;UBERON:0002417!1.16e-09!61;UBERON:0000916!1.16e-09!61;UBERON:0000475!7.92e-09!365;UBERON:0009856!9.05e-09!26;UBERON:0007499!1.96e-08!25;UBERON:0001048!1.97e-08!168;UBERON:0001737!1.99e-08!9;UBERON:0000477!2.35e-08!286;UBERON:0003135!3.05e-08!11;UBERON:0005172!6.33e-08!55;UBERON:0005173!6.33e-08!55;UBERON:0002368!5.01e-07!35;UBERON:0005743!9.27e-07!86 | |ontology_enrichment_uberon=UBERON:0002107!6.05e-12!19;UBERON:0006925!6.05e-12!19;UBERON:0008836!6.05e-12!19;UBERON:0007023!4.06e-11!115;UBERON:0009854!8.91e-11!23;UBERON:0005057!1.29e-10!26;UBERON:0008835!1.93e-10!22;UBERON:0003894!1.93e-10!22;UBERON:0009497!2.85e-10!25;UBERON:0000015!2.85e-10!25;UBERON:0002423!2.85e-10!25;UBERON:0006235!2.85e-10!25;UBERON:0004161!2.85e-10!25;UBERON:0000481!9.30e-10!347;UBERON:0002417!1.16e-09!61;UBERON:0000916!1.16e-09!61;UBERON:0000475!7.92e-09!365;UBERON:0009856!9.05e-09!26;UBERON:0007499!1.96e-08!25;UBERON:0001048!1.97e-08!168;UBERON:0001737!1.99e-08!9;UBERON:0000477!2.35e-08!286;UBERON:0003135!3.05e-08!11;UBERON:0005172!6.33e-08!55;UBERON:0005173!6.33e-08!55;UBERON:0002368!5.01e-07!35;UBERON:0005743!9.27e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;9.03e-19;19!UBERON:0006925;9.03e-19;19!UBERON:0001737;9.01e-15;9!UBERON:0001557;9.01e-15;9!UBERON:0002423;2.74e-13;25!UBERON:0002368;6.05e-10;33!UBERON:0002365;1.22e-09;31!UBERON:0002330;1.22e-09;31!UBERON:0001896;2.90e-07;3!UBERON:0005290;2.90e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002107;9.03e-19;19!UBERON:0006925;9.03e-19;19!UBERON:0001737;9.01e-15;9!UBERON:0001557;9.01e-15;9!UBERON:0002423;2.74e-13;25!UBERON:0002368;6.05e-10;33!UBERON:0002365;1.22e-09;31!UBERON:0002330;1.22e-09;31!UBERON:0001896;2.90e-07;3!UBERON:0005290;2.90e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.83e-19,19;UBERON:0006925,8.83e-19,19;UBERON:0008836,8.83e-19,19;UBERON:0008835,1.17e-15,22;UBERON:0003894,1.17e-15,22;UBERON:0001737,5.15e-15,9;UBERON:0009854,8.43e-15,23;UBERON:0007499,2.70e-13,25;UBERON:0009497,2.70e-13,25;UBERON:0000015,2.70e-13,25;UBERON:0002423,2.70e-13,25;UBERON:0006235,2.70e-13,25;UBERON:0004161,2.70e-13,25;UBERON:0009856,1.24e-12,26;UBERON:0001048,5.28e-10,160;UBERON:0002365,5.68e-10,31;UBERON:0002330,5.68e-10,31;UBERON:0002368,1.36e-09,35;UBERON:0005172,7.03e-09,54;UBERON:0005173,7.03e-09,54;UBERON:0002417,1.83e-08,60;UBERON:0000916,1.83e-08,60;UBERON:0001041,4.05e-08,87;UBERON:0001896,2.83e-07,3;UBERON:0005290,2.83e-07,3;UBERON:0010096,2.83e-07,3 | |||
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| ||
|short_description=p1@HPD | |short_description=p1@HPD | ||
}} | }} |
Revision as of 23:54, 15 November 2012
Short description: | p1@HPD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_HPD_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000289004, ENST00000535114, NM_002150, uc001ubj.2_5end |
EntrezGene: | HPD |
HGNC: | 5147 |
UniProt: | P32754 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.91e-10 | 12 |
GAG secreting cell | 6.69e-08 | 9 |
carbohydrate secreting cell | 6.69e-08 | 9 |
extracellular matrix secreting cell | 2.50e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
liver | 8.83e-19 | 19 |
digestive gland | 8.83e-19 | 19 |
liver bud | 8.83e-19 | 19 |
hepatic diverticulum | 1.17e-15 | 22 |
liver primordium | 1.17e-15 | 22 |
larynx | 5.15e-15 | 9 |
digestive tract diverticulum | 8.43e-15 | 23 |
epithelial sac | 2.70e-13 | 25 |
epithelium of foregut-midgut junction | 2.70e-13 | 25 |
anatomical boundary | 2.70e-13 | 25 |
hepatobiliary system | 2.70e-13 | 25 |
foregut-midgut junction | 2.70e-13 | 25 |
septum transversum | 2.70e-13 | 25 |
sac | 1.24e-12 | 26 |
primordium | 5.28e-10 | 160 |
exocrine gland | 5.68e-10 | 31 |
exocrine system | 5.68e-10 | 31 |
endocrine gland | 1.36e-09 | 35 |
abdomen element | 7.03e-09 | 54 |
abdominal segment element | 7.03e-09 | 54 |
abdominal segment of trunk | 1.83e-08 | 60 |
abdomen | 1.83e-08 | 60 |
foregut | 4.05e-08 | 87 |
medulla oblongata | 2.83e-07 | 3 |
myelencephalon | 2.83e-07 | 3 |
future myelencephalon | 2.83e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.