FFCP PHASE1:Hg19::chr17:15554920..15554929,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.58e-19!254;CL:0000076!3.54e-08!62;CL:0002076!1.18e-07!43 | |ontology_enrichment_celltype=CL:0000066!1.58e-19!254;CL:0000076!3.54e-08!62;CL:0002076!1.18e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000082;1.45e-09;19!CL:0002166;2.86e-07;3!CL:0002076;6.01e-07;42!CL:0002159;7.02e-07;14 | |ontology_enrichment_celltype_v019=CL:0000082;1.45e-09;19!CL:0002166;2.86e-07;3!CL:0002076;6.01e-07;42!CL:0002159;7.02e-07;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.44e-15,253;CL:0000082,8.41e-10,19;CL:0002076,7.04e-08,42;CL:0002166,2.77e-07,3;CL:0002159,6.88e-07,14;CL:0002541,6.95e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.86e-11;29 | |ontology_enrichment_development_v019=UBERON:0008947;8.86e-11;29 | ||
|ontology_enrichment_disease=DOID:305!2.53e-09!106;DOID:0050687!8.27e-07!143 | |ontology_enrichment_disease=DOID:305!2.53e-09!106;DOID:0050687!8.27e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;8.62e-07;14 | |ontology_enrichment_disease_v019=DOID:1749;8.62e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.31e-08,106;DOID:1749,7.15e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.88e-10!169;UBERON:0000925!1.88e-10!169;UBERON:0006595!1.88e-10!169;UBERON:0001004!2.69e-09!72;UBERON:0001007!9.98e-08!155;UBERON:0001555!9.98e-08!155;UBERON:0007026!9.98e-08!155;UBERON:0003102!1.42e-07!95;UBERON:0000161!2.67e-07!35;UBERON:0000065!9.35e-07!53 | |ontology_enrichment_uberon=UBERON:0004119!1.88e-10!169;UBERON:0000925!1.88e-10!169;UBERON:0006595!1.88e-10!169;UBERON:0001004!2.69e-09!72;UBERON:0001007!9.98e-08!155;UBERON:0001555!9.98e-08!155;UBERON:0007026!9.98e-08!155;UBERON:0003102!1.42e-07!95;UBERON:0000161!2.67e-07!35;UBERON:0000065!9.35e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0004807;1.44e-13;22!UBERON:0005911;1.05e-10;36!UBERON:0004802;1.45e-09;19!UBERON:0000115;1.45e-09;19!UBERON:0000072;1.87e-09;37!UBERON:0001708;5.81e-09;4!UBERON:0008895;5.81e-09;4!UBERON:0000065;2.02e-08;44!UBERON:0002048;5.73e-08;22!UBERON:0000117;5.73e-08;22!UBERON:0000171;5.73e-08;22!UBERON:0000170;5.73e-08;22!UBERON:0001737;1.28e-07;9!UBERON:0001557;1.28e-07;9!UBERON:0011159;3.71e-07;5!UBERON:0005178;4.81e-07;34!UBERON:0002224;4.81e-07;34!UBERON:0005181;6.13e-07;35 | |ontology_enrichment_uberon_v019=UBERON:0004807;1.44e-13;22!UBERON:0005911;1.05e-10;36!UBERON:0004802;1.45e-09;19!UBERON:0000115;1.45e-09;19!UBERON:0000072;1.87e-09;37!UBERON:0001708;5.81e-09;4!UBERON:0008895;5.81e-09;4!UBERON:0000065;2.02e-08;44!UBERON:0002048;5.73e-08;22!UBERON:0000117;5.73e-08;22!UBERON:0000171;5.73e-08;22!UBERON:0000170;5.73e-08;22!UBERON:0001737;1.28e-07;9!UBERON:0001557;1.28e-07;9!UBERON:0011159;3.71e-07;5!UBERON:0005178;4.81e-07;34!UBERON:0002224;4.81e-07;34!UBERON:0005181;6.13e-07;35 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0008947,4.32e-12,38;UBERON:0003258,4.32e-12,38;UBERON:0004119,4.89e-12,160;UBERON:0000925,4.89e-12,160;UBERON:0006595,4.89e-12,160;UBERON:0003124,2.53e-10,7;UBERON:0000072,2.56e-10,47;UBERON:0004807,3.77e-10,28;UBERON:0001004,4.59e-10,74;UBERON:0004802,8.41e-10,19;UBERON:0000115,8.41e-10,19;UBERON:0000065,1.45e-09,54;UBERON:0001041,9.69e-09,87;UBERON:0005631,9.70e-09,14;UBERON:0000158,9.70e-09,14;UBERON:0001708,9.73e-09,4;UBERON:0008895,9.73e-09,4;UBERON:0001007,1.79e-08,145;UBERON:0001555,1.79e-08,145;UBERON:0007026,1.79e-08,145;UBERON:0002048,3.62e-08,22;UBERON:0000117,3.62e-08,22;UBERON:0000171,3.62e-08,22;UBERON:0000170,3.62e-08,22;UBERON:0005597,3.62e-08,22;UBERON:0000118,3.62e-08,22;UBERON:0005911,5.69e-08,82;UBERON:0001737,6.18e-08,9;UBERON:0005178,6.84e-08,34;UBERON:0002224,6.84e-08,34;UBERON:0005181,1.40e-07,35;UBERON:0004921,1.83e-07,118;UBERON:0011159,5.55e-07,5;UBERON:0000920,6.95e-07,3;UBERON:0005157,7.19e-07,47 | |||
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| ||
|short_description=p3@TRIM16 | |short_description=p3@TRIM16 | ||
}} | }} |
Revision as of 23:07, 15 November 2012
Short description: | p3@TRIM16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TRIM16_5end |
Coexpression cluster: | NA |
Association with transcript: | 330bp_to_uc002gor.1_5end |
EntrezGene: | TRIM16 |
HGNC: | 17241 |
UniProt: | Q59EB2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.44e-15 | 253 |
epithelial cell of lung | 8.41e-10 | 19 |
endo-epithelial cell | 7.04e-08 | 42 |
epithelial cell of Malassez | 2.77e-07 | 3 |
general ecto-epithelial cell | 6.88e-07 | 14 |
chorionic membrane mesenchymal stem cell | 6.95e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
respiratory primordium | 4.32e-12 | 38 |
endoderm of foregut | 4.32e-12 | 38 |
endoderm-derived structure | 4.89e-12 | 160 |
endoderm | 4.89e-12 | 160 |
presumptive endoderm | 4.89e-12 | 160 |
chorion | 2.53e-10 | 7 |
segment of respiratory tract | 2.56e-10 | 47 |
respiratory system epithelium | 3.77e-10 | 28 |
respiratory system | 4.59e-10 | 74 |
respiratory tract epithelium | 8.41e-10 | 19 |
lung epithelium | 8.41e-10 | 19 |
respiratory tract | 1.45e-09 | 54 |
foregut | 9.69e-09 | 87 |
extraembryonic membrane | 9.70e-09 | 14 |
membranous layer | 9.70e-09 | 14 |
jaw skeleton | 9.73e-09 | 4 |
splanchnocranium | 9.73e-09 | 4 |
digestive system | 1.79e-08 | 145 |
digestive tract | 1.79e-08 | 145 |
primitive gut | 1.79e-08 | 145 |
lung | 3.62e-08 | 22 |
respiratory tube | 3.62e-08 | 22 |
respiration organ | 3.62e-08 | 22 |
pair of lungs | 3.62e-08 | 22 |
lung primordium | 3.62e-08 | 22 |
lung bud | 3.62e-08 | 22 |
endo-epithelium | 5.69e-08 | 82 |
larynx | 6.18e-08 | 9 |
thoracic cavity element | 6.84e-08 | 34 |
thoracic cavity | 6.84e-08 | 34 |
thoracic segment organ | 1.40e-07 | 35 |
subdivision of digestive tract | 1.83e-07 | 118 |
primary subdivision of cranial skeletal system | 5.55e-07 | 5 |
egg chorion | 6.95e-07 | 3 |
epithelial fold | 7.19e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.31e-08 | 106 |
squamous cell carcinoma | 7.15e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.