FFCP PHASE1:Hg19::chr7:99797848..99797861,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000945!5.94e-37!24;CL:0000826!5.94e-37!24;CL:0000236!1.83e-25!14;CL:0000542!4.21e-15!53;CL:0000051!4.21e-15!53;CL:0000838!5.93e-14!52;CL:0000037!6.82e-13!172;CL:0000566!6.82e-13!172;CL:0002032!4.52e-12!165;CL:0000837!4.52e-12!165;CL:0000738!7.16e-12!140;CL:0000988!1.30e-11!182;CL:0002087!2.30e-11!119;CL:0000451!3.87e-10!10;CL:0000990!2.30e-09!8;CL:0002031!6.48e-09!124 | |ontology_enrichment_celltype=CL:0000945!5.94e-37!24;CL:0000826!5.94e-37!24;CL:0000236!1.83e-25!14;CL:0000542!4.21e-15!53;CL:0000051!4.21e-15!53;CL:0000838!5.93e-14!52;CL:0000037!6.82e-13!172;CL:0000566!6.82e-13!172;CL:0002032!4.52e-12!165;CL:0000837!4.52e-12!165;CL:0000738!7.16e-12!140;CL:0000988!1.30e-11!182;CL:0002087!2.30e-11!119;CL:0000451!3.87e-10!10;CL:0000990!2.30e-09!8;CL:0002031!6.48e-09!124 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.10e-81;13!CL:0000945;8.57e-44;24!CL:0000542;2.41e-16;53 | |ontology_enrichment_celltype_v019=CL:0000236;2.10e-81;13!CL:0000945;8.57e-44;24!CL:0000542;2.41e-16;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.52e-75,14;CL:0000945,8.59e-44,24;CL:0000826,8.59e-44,24;CL:0000838,8.86e-20,52;CL:0000542,2.17e-19,53;CL:0000051,2.17e-19,53;CL:0002087,2.40e-10,115;CL:0002031,7.19e-10,120;CL:0000738,1.41e-08,136;CL:0002032,4.58e-07,161;CL:0000837,4.58e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000051;2.41e-16;53!UBERON:0006298;1.84e-14;1!UBERON:0004872;1.32e-08;7 | |ontology_enrichment_development_v019=CL:0000051;2.41e-16;53!UBERON:0006298;1.84e-14;1!UBERON:0004872;1.32e-08;7 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!2.85e-08!3;UBERON:0004854!2.85e-08!3;UBERON:0009034!2.85e-08!3;UBERON:0002095!2.85e-08!3;UBERON:0004782!2.85e-08!3;UBERON:0003281!2.85e-08!3;UBERON:0009664!2.85e-08!3;UBERON:0002296!2.85e-08!3;UBERON:0005602!2.85e-08!3;UBERON:0001179!2.85e-08!3;UBERON:0006293!2.85e-08!3;UBERON:0007023!2.85e-08!115 | |ontology_enrichment_uberon=UBERON:0002106!2.85e-08!3;UBERON:0004854!2.85e-08!3;UBERON:0009034!2.85e-08!3;UBERON:0002095!2.85e-08!3;UBERON:0004782!2.85e-08!3;UBERON:0003281!2.85e-08!3;UBERON:0009664!2.85e-08!3;UBERON:0002296!2.85e-08!3;UBERON:0005602!2.85e-08!3;UBERON:0001179!2.85e-08!3;UBERON:0006293!2.85e-08!3;UBERON:0007023!2.85e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;7.93e-19;3!UBERON:0000029;1.84e-14;1!UBERON:0001736;1.84e-14;1!UBERON:0004177;1.09e-11;5!UBERON:0005057;1.09e-11;5!UBERON:0001829;7.03e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0002106;7.93e-19;3!UBERON:0000029;1.84e-14;1!UBERON:0001736;1.84e-14;1!UBERON:0004177;1.09e-11;5!UBERON:0005057;1.09e-11;5!UBERON:0001829;7.03e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,9.50e-19,3;UBERON:0004854,9.50e-19,3;UBERON:0009034,9.50e-19,3;UBERON:0002095,9.50e-19,3;UBERON:0004782,9.50e-19,3;UBERON:0003281,9.50e-19,3;UBERON:0009664,9.50e-19,3;UBERON:0002296,9.50e-19,3;UBERON:0005602,9.50e-19,3;UBERON:0001179,9.50e-19,3;UBERON:0006293,9.50e-19,3;UBERON:0000029,1.61e-14,1;UBERON:0001736,1.84e-14,1;UBERON:0006298,1.84e-14,1;UBERON:0004177,1.42e-08,7;UBERON:0005057,1.42e-08,7;UBERON:0001829,7.03e-08,2;UBERON:0000945,1.31e-07,8;UBERON:0010039,1.31e-07,8 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0.232401601740905,0.142169232487422,0,0,0,0,0,0.971680998056939,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0.209658645508376,0,0,0,0,0,0,0,3.27683166757279,0.889509253863555,1.28019066769952,1.20118796110804,3.4485146397269,3.30522436392431,1.90810750907073,2.84606484554724,1.76171156811282,4.20500550937752,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.261958150995425,0,0.370784442784429,0.649094787309367,0.522389211897802,0.398873881556595,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.432807638929335,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0.403599414382095,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0.511572370226872,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0.359030577639089,0,0,0,0,0,0,0,0.451191321234361,0,0.335643173951685,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,1.48849806543585,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0.310482014706917,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0.327130788511688,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0,0,0,0,0,0,5.82700291475092,1.28915775947154,0.0999411559249289,0,0,0,0,1.37618785021362,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0.534434810531121,0,0.752122617877125,0.378893491091197,1.33982065078089,0,0,0,0,0,0.186224142887574,0,0,0,0,0,0.740872583160463,0.286888821570705,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | ||
|short_description=p6@STAG3 | |short_description=p6@STAG3 | ||
}} | }} |
Revision as of 23:07, 15 November 2012
Short description: | p6@STAG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_STAG3_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 78bp_to_ENST00000479359_5end |
EntrezGene: | STAG3 |
HGNC: | 11356 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.52e-75 | 14 |
lymphocyte of B lineage | 8.59e-44 | 24 |
pro-B cell | 8.59e-44 | 24 |
lymphoid lineage restricted progenitor cell | 8.86e-20 | 52 |
lymphocyte | 2.17e-19 | 53 |
common lymphoid progenitor | 2.17e-19 | 53 |
nongranular leukocyte | 2.40e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 7.19e-10 | 120 |
leukocyte | 1.41e-08 | 136 |
hematopoietic oligopotent progenitor cell | 4.58e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.58e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
spleen | 9.50e-19 | 3 |
gastrointestinal system mesentery | 9.50e-19 | 3 |
stomach region | 9.50e-19 | 3 |
mesentery | 9.50e-19 | 3 |
gastrointestinal system serosa | 9.50e-19 | 3 |
mesentery of stomach | 9.50e-19 | 3 |
gut mesentery | 9.50e-19 | 3 |
dorsal mesentery | 9.50e-19 | 3 |
dorsal mesogastrium | 9.50e-19 | 3 |
peritoneal cavity | 9.50e-19 | 3 |
spleen primordium | 9.50e-19 | 3 |
lymph node | 1.61e-14 | 1 |
submandibular gland | 1.84e-14 | 1 |
submandibular gland primordium | 1.84e-14 | 1 |
hemopoietic organ | 1.42e-08 | 7 |
immune organ | 1.42e-08 | 7 |
major salivary gland | 7.03e-08 | 2 |
stomach | 1.31e-07 | 8 |
food storage organ | 1.31e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.