FFCP PHASE1:Mm9::chr16:42249172..42249185,-: Difference between revisions
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|id=chr16:42249172..42249185,- | |id=chr16:42249172..42249185,- | ||
|ontology_enrichment_celltype=CL:0000540!1.30e-14!33;CL:0000047!1.30e-14!33;CL:0000031!1.30e-14!33;CL:0000404!1.30e-14!33;CL:0000117!3.65e-14!23;CL:0000337!3.65e-14!23;CL:0000393!7.29e-11!39;CL:0000211!7.29e-11!39;CL:0002319!7.63e-10!43;CL:0000221!2.08e-09!44;CL:0000133!2.08e-09!44;CL:0000055!3.31e-07!50 | |ontology_enrichment_celltype=CL:0000540!1.30e-14!33;CL:0000047!1.30e-14!33;CL:0000031!1.30e-14!33;CL:0000404!1.30e-14!33;CL:0000117!3.65e-14!23;CL:0000337!3.65e-14!23;CL:0000393!7.29e-11!39;CL:0000211!7.29e-11!39;CL:0002319!7.63e-10!43;CL:0000221!2.08e-09!44;CL:0000133!2.08e-09!44;CL:0000055!3.31e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.16e-17,23;CL:0000337,1.16e-17,23;CL:0000540,5.71e-12,33;CL:0000047,5.71e-12,33;CL:0000031,5.71e-12,33;CL:0000404,5.71e-12,33;CL:0002611,4.34e-11,2;CL:0000393,5.99e-10,39;CL:0000211,5.99e-10,39;CL:0002319,6.50e-09,43;CL:0000221,1.10e-08,44;CL:0000133,1.10e-08,44;CL:0002612,2.85e-08,3;CL:0000120,3.63e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.60e-25!73;UBERON:0005743!1.60e-25!73;UBERON:0002346!2.99e-25!71;UBERON:0003075!2.99e-25!71;UBERON:0007284!2.99e-25!71;UBERON:0000073!2.70e-24!75;UBERON:0001016!2.70e-24!75;UBERON:0001049!1.89e-22!52;UBERON:0005068!1.89e-22!52;UBERON:0006241!1.89e-22!52;UBERON:0007135!1.89e-22!52;UBERON:0004121!1.17e-21!102;UBERON:0000924!1.17e-21!102;UBERON:0006601!1.17e-21!102;UBERON:0002020!4.64e-20!34;UBERON:0002616!4.61e-19!49;UBERON:0000955!2.16e-18!50;UBERON:0006238!2.16e-18!50;UBERON:0003080!2.20e-17!40;UBERON:0003056!2.23e-17!49;UBERON:0002780!8.56e-17!39;UBERON:0001890!8.56e-17!39;UBERON:0006240!8.56e-17!39;UBERON:0000033!1.70e-16!63;UBERON:0002791!6.15e-16!29;UBERON:0003528!6.15e-16!29;UBERON:0001893!6.15e-16!29;UBERON:0000956!5.18e-11!21;UBERON:0001869!5.18e-11!21;UBERON:0000203!5.18e-11!21;UBERON:0002021!6.19e-09!10;UBERON:0000411!6.19e-09!10;UBERON:0001950!6.19e-09!10;UBERON:0007811!1.02e-08!86;UBERON:0002619!1.15e-08!17;UBERON:0000153!1.58e-07!94 | |ontology_enrichment_uberon=UBERON:0001017!1.60e-25!73;UBERON:0005743!1.60e-25!73;UBERON:0002346!2.99e-25!71;UBERON:0003075!2.99e-25!71;UBERON:0007284!2.99e-25!71;UBERON:0000073!2.70e-24!75;UBERON:0001016!2.70e-24!75;UBERON:0001049!1.89e-22!52;UBERON:0005068!1.89e-22!52;UBERON:0006241!1.89e-22!52;UBERON:0007135!1.89e-22!52;UBERON:0004121!1.17e-21!102;UBERON:0000924!1.17e-21!102;UBERON:0006601!1.17e-21!102;UBERON:0002020!4.64e-20!34;UBERON:0002616!4.61e-19!49;UBERON:0000955!2.16e-18!50;UBERON:0006238!2.16e-18!50;UBERON:0003080!2.20e-17!40;UBERON:0003056!2.23e-17!49;UBERON:0002780!8.56e-17!39;UBERON:0001890!8.56e-17!39;UBERON:0006240!8.56e-17!39;UBERON:0000033!1.70e-16!63;UBERON:0002791!6.15e-16!29;UBERON:0003528!6.15e-16!29;UBERON:0001893!6.15e-16!29;UBERON:0000956!5.18e-11!21;UBERON:0001869!5.18e-11!21;UBERON:0000203!5.18e-11!21;UBERON:0002021!6.19e-09!10;UBERON:0000411!6.19e-09!10;UBERON:0001950!6.19e-09!10;UBERON:0007811!1.02e-08!86;UBERON:0002619!1.15e-08!17;UBERON:0000153!1.58e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,3.69e-17,5;UBERON:0002315,3.69e-17,5;UBERON:0000073,1.32e-14,54;UBERON:0002240,2.42e-14,6;UBERON:0005174,2.42e-14,6;UBERON:0001137,2.42e-14,6;UBERON:0001017,3.01e-14,73;UBERON:0002020,3.97e-14,34;UBERON:0001016,8.19e-14,75;UBERON:0001049,6.65e-13,52;UBERON:0005068,6.65e-13,52;UBERON:0006241,6.65e-13,52;UBERON:0007135,6.65e-13,52;UBERON:0002256,4.34e-11,2;UBERON:0003076,5.33e-11,12;UBERON:0003057,5.33e-11,12;UBERON:0004121,1.82e-10,95;UBERON:0000924,1.82e-10,95;UBERON:0006601,1.82e-10,95;UBERON:0002346,3.67e-10,64;UBERON:0003075,3.67e-10,64;UBERON:0007284,3.67e-10,64;UBERON:0010371,1.08e-08,73;UBERON:0002257,2.85e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,5.28990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.725827286159344,0.675029691658453,0.210324961351382,1.14260393761521,1.98781686856452,0.367472397644862,0.575072826109418,0,0,0.766124028511126,1.22885226604995,0.923204014111357,3.65950574409639,0,0.558365998002762,2.8138130501584,0.763991238884051,2.65165726926301,4.27115042397309,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.520455980298408,0.304465478312141,0,0.753613202763113,0.470354828542819,0,0,0,0,0,0,0,0,0.292780797011547,2.72280718857492,0,0,0,0,0.449371918214468,0.457500602818626,2.01046963380583,0.347648640384553,0.511430914660661,1.45451631191692,0.162241263067758,0,0,0,0,0,0.229902104433473,0.540186389416048,0.452114453507145,0.272145996605311,0.384341160854549,0,0,0,0,0,0.657587197282725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.617427674275707,0,0,0.213288250535234,0.464473343720877,0.257734922644187,0,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0,1.79763881730844,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0.631016438832513,0.390438744296638,0.215423397732799,0,0.668396022247182,0,0.404810701674894,0.876767573733936,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0.36012218806262,0.129358683782755,0,0,0.178368817602071,0.493647061806363,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0.564751842617067,1.38097570952153,1.14579102687879,0.515559547031063,0.685082519770642,0.755393897389701,1.35004500046361,0.45032120322422,0.453142408984205,0.51776031175182,0.207574695168353,1.19707462020309,0,0.486213434136588,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0.252697211763798,0.50695859978048,0.188626341386076,0.0936415074698824,0.192075457214608,0.114870937911227,0.952587382566147,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0.581385666529314,0.376437521661322,0,0.548783918618318,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0.309873682371932,0,0.499621155875892,0,0.429742108096597,0.191288332068843,0.220591419119515,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,5.28990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.725827286159344,0.675029691658453,0.210324961351382,1.14260393761521,1.98781686856452,0.367472397644862,0.575072826109418,0,0,0.766124028511126,1.22885226604995,0.923204014111357,3.65950574409639,0,0.558365998002762,2.8138130501584,0.763991238884051,2.65165726926301,4.27115042397309,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.520455980298408,0.304465478312141,0,0.753613202763113,0.470354828542819,0,0,0,0,0,0,0,0,0.292780797011547,2.72280718857492,0,0,0,0,0.449371918214468,0.457500602818626,2.01046963380583,0.347648640384553,0.511430914660661,1.45451631191692,0.162241263067758,0,0,0,0,0,0.229902104433473,0.540186389416048,0.452114453507145,0.272145996605311,0.384341160854549,0,0,0,0,0,0.657587197282725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.617427674275707,0,0,0.213288250535234,0.464473343720877,0.257734922644187,0,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0,1.79763881730844,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0.631016438832513,0.390438744296638,0.215423397732799,0,0.668396022247182,0,0.404810701674894,0.876767573733936,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0.36012218806262,0.129358683782755,0,0,0.178368817602071,0.493647061806363,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0.564751842617067,1.38097570952153,1.14579102687879,0.515559547031063,0.685082519770642,0.755393897389701,1.35004500046361,0.45032120322422,0.453142408984205,0.51776031175182,0.207574695168353,1.19707462020309,0,0.486213434136588,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0.252697211763798,0.50695859978048,0.188626341386076,0.0936415074698824,0.192075457214608,0.114870937911227,0.952587382566147,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0.581385666529314,0.376437521661322,0,0.548783918618318,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0.309873682371932,0,0.499621155875892,0,0.429742108096597,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr16:42249172..42249185,- | |short_description=p@chr16:42249172..42249185,- | ||
}} | }} |
Revision as of 04:36, 15 November 2012
Short description: | p@chr16:42249172..42249185, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:42249172..42249185, - |
Coexpression cluster: | MCL_coexpression_mm9:596 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.16e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.16e-17 | 23 |
neuron | 5.71e-12 | 33 |
neuronal stem cell | 5.71e-12 | 33 |
neuroblast | 5.71e-12 | 33 |
electrically signaling cell | 5.71e-12 | 33 |
neuron of the dorsal spinal cord | 4.34e-11 | 2 |
electrically responsive cell | 5.99e-10 | 39 |
electrically active cell | 5.99e-10 | 39 |
neural cell | 6.50e-09 | 43 |
ectodermal cell | 1.10e-08 | 44 |
neurectodermal cell | 1.10e-08 | 44 |
neuron of the ventral spinal cord | 2.85e-08 | 3 |
granule cell | 3.63e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 3.69e-17 | 5 |
gray matter of spinal cord | 3.69e-17 | 5 |
regional part of nervous system | 1.32e-14 | 54 |
spinal cord | 2.42e-14 | 6 |
dorsal region element | 2.42e-14 | 6 |
dorsum | 2.42e-14 | 6 |
central nervous system | 3.01e-14 | 73 |
gray matter | 3.97e-14 | 34 |
nervous system | 8.19e-14 | 75 |
neural tube | 6.65e-13 | 52 |
neural rod | 6.65e-13 | 52 |
future spinal cord | 6.65e-13 | 52 |
neural keel | 6.65e-13 | 52 |
dorsal horn of spinal cord | 4.34e-11 | 2 |
posterior neural tube | 5.33e-11 | 12 |
chordal neural plate | 5.33e-11 | 12 |
ectoderm-derived structure | 1.82e-10 | 95 |
ectoderm | 1.82e-10 | 95 |
presumptive ectoderm | 1.82e-10 | 95 |
neurectoderm | 3.67e-10 | 64 |
neural plate | 3.67e-10 | 64 |
presumptive neural plate | 3.67e-10 | 64 |
ecto-epithelium | 1.08e-08 | 73 |
ventral horn of spinal cord | 2.85e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.