FFCP PHASE1:Mm9::chr11:60966638..60966646,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 7: | Line 7: | ||
|id=chr11:60966638..60966646,- | |id=chr11:60966638..60966646,- | ||
|ontology_enrichment_celltype=CL:0000117!2.46e-09!23;CL:0000337!2.46e-09!23;CL:0000540!4.67e-07!33;CL:0000047!4.67e-07!33;CL:0000031!4.67e-07!33;CL:0000404!4.67e-07!33;CL:0000393!7.14e-07!39;CL:0000211!7.14e-07!39 | |ontology_enrichment_celltype=CL:0000117!2.46e-09!23;CL:0000337!2.46e-09!23;CL:0000540!4.67e-07!33;CL:0000047!4.67e-07!33;CL:0000031!4.67e-07!33;CL:0000404!4.67e-07!33;CL:0000393!7.14e-07!39;CL:0000211!7.14e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.81e-25,23;CL:0000337,3.81e-25,23;CL:0000540,2.97e-18,33;CL:0000047,2.97e-18,33;CL:0000031,2.97e-18,33;CL:0000404,2.97e-18,33;CL:0000393,1.88e-16,39;CL:0000211,1.88e-16,39;CL:0000221,3.43e-14,44;CL:0000133,3.43e-14,44;CL:0002319,6.06e-13,43;CL:0002321,2.45e-10,70;CL:0000723,3.15e-09,91;CL:0000048,3.15e-09,91;CL:0000034,2.71e-08,97;CL:0002612,5.00e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.90e-16,34;UBERON:0000073,3.00e-12,54;UBERON:0001948,3.68e-12,5;UBERON:0002315,3.68e-12,5;UBERON:0001017,5.48e-11,73;UBERON:0001016,1.52e-10,75;UBERON:0001049,3.03e-10,52;UBERON:0005068,3.03e-10,52;UBERON:0006241,3.03e-10,52;UBERON:0007135,3.03e-10,52;UBERON:0002240,4.76e-10,6;UBERON:0005174,4.76e-10,6;UBERON:0001137,4.76e-10,6;UBERON:0003528,5.20e-09,29;UBERON:0002791,5.20e-09,29;UBERON:0001893,5.20e-09,29;UBERON:0002346,1.64e-08,64;UBERON:0003075,1.64e-08,64;UBERON:0007284,1.64e-08,64;UBERON:0004121,4.87e-08,95;UBERON:0000924,4.87e-08,95;UBERON:0006601,4.87e-08,95;UBERON:0002257,5.00e-08,3;UBERON:0010371,7.47e-08,73;UBERON:0002420,3.10e-07,8;UBERON:0007245,3.10e-07,8;UBERON:0010009,3.10e-07,8;UBERON:0010011,3.10e-07,8;UBERON:0000454,3.10e-07,8;UBERON:0002780,4.41e-07,39;UBERON:0001890,4.41e-07,39;UBERON:0006240,4.41e-07,39;UBERON:0003080,7.82e-07,40 | |||
|phase1_expression=0.960893082628764,0,0.454999239389536,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.510259740906419,0.595745707205312,0,0.159992422793407,0.22940928106717,0.57423196411502,0,0.646413698057667,0.380046838912748,0.504060259519861,0.665191531965914,0,0,0,0.866554859253824,0.831173226792462,0.408338712524738,1.25559489221072,0,1.0470474879476,0.588231488031014,2.04913645487534,0.485510353031154,0.125896817975577,0.405507724878058,0,0.782391344348039,0,0.219686182734472,0.194429899074283,0,0,0,0,0,1.02903774414379,0.286533439938757,0.515672092277442,1.01158230429799,4.7609188134483,0,0,0,1.3498495759221,1.97773272513395,0.7104801149461,0,0.384218305321555,1.65903379693564,2.70011876663381,2.3135745748652,2.57085885963423,2.20868540951614,1.46988959057945,0.479227355091182,0,0,1.14918604276669,1.22885226604995,1.58263545276233,0.548925861614458,3.64639359389732,1.3959149950069,0.56276261003168,2.75036845998258,2.35702868378934,3.70166370077668,2.42319279572891,0.454357159999104,0.755715601067855,0.289864488701678,0,0,0.539703191637817,0.649776417447669,0,0,0.511290967734173,0,0,1.54927761754349,0,0,0,2.38140145112336,1.52015919285059,0.505524445014783,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.904335843315735,0.117588707135705,0.251333182659351,0,0,0,0.970601099684455,0.220841518460394,0,0,0,0.628340120440365,0.255457055208591,1.55759661857696,0,1.01656181658452,0.149790639404823,0,3.01570445070875,0.521472960576829,1.02286182932132,0.20778804455956,0.973447578406546,0.81471491080253,0.248813941220186,0,0.210441855886474,0.520481771850815,0.459804208866946,0.360124259610698,0.753524089178575,0.816437989815934,0.384341160854549,0.937017245597288,0,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0,0.411564272815887,0.796137067273973,0,0,0.568326998791185,0.207125772535502,0.469052119962192,0.720248245844059,0,0.196764231747404,0.462801338662135,0,0.536546802799238,0.583826711835847,0.493679549740441,0,0.0810688095458557,0.730999937126662,0,0,0,1.64647379806855,0.330418782983798,0,0.213288250535234,0.928946687441754,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,1.00534083520108,0.198956472041151,0.38992817423824,0,0.432276099749388,0.398282546508734,0,0.571242563048644,1.1270773567308,0,0.387904974335251,0.561086559122548,0.442655759869801,0.147610147979602,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0.674586337154561,0.202860121388503,0,0,0,0.972811360650212,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0.179397413521912,1.4473305640901,0,0,0.162964976442026,0.509235257325564,0,0,0,0.390267295715598,0.157635144106191,0.221464689648775,0.478364305972461,0,0.518054945597687,0.433947175744535,0,0,0,0,0,0.35163505977661,0.163934945376675,0.252470927204373,1.26203287766503,0,0.430846795465598,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0,0.321321316421807,0,0.890328018336276,1.30309567482861,0,0,0.242780636154981,0.906970670894253,0.188605079755898,0,0,0.258428293168221,1.09060118843252,1.06949213515416,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.258717367565509,0.857348140126369,0,1.07021290561242,0.329098041204242,0.304464949114599,0,0.21183207086382,0,0.16488625294148,0.161464426695906,0.241251699712623,0.358117032009409,0.164140899745061,0.291480836629851,0,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0,0.849892149969277,0.839708713941948,0.829199842826543,0,0,0,0.108005340821801,0.418176592028937,0.655087691238533,0.674321731924103,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,0.598066184175915,0.992750942742586,0.194451188344048,0.516639293910924,1.01373675294467,1.05621514781179,0.781226309063701,0.524296722128554,0.724752362478018,0.576060012515731,0,0.405450430580328,0.924398614483445,0.389762468933385,0.179026695667481,0,0.480781798079875,0.443068581523732,0,0.533447646584999,0,0.194915761479505,0.481059208201647,0.350630706544707,0.226730383615211,0,0.269141569828427,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,3.09335728218638,0,0,0,1.35096360967266,0,0.51776031175182,0.93408612825759,0,0.341467211508268,0,0.209613162627982,0,0,0,0,0.252697211763798,0,0,0.187283014939765,0.192075457214608,0.287177344778066,0,0.231768651889711,0.578727661391115,0.824171801606613,0.294397840268795,0,0.887379030796687,0.476872379894642,0.581385666529314,0.0941093804153306,0.338458431566706,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.591026894253381,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0.231867835620421 | |phase1_expression=0.960893082628764,0,0.454999239389536,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.510259740906419,0.595745707205312,0,0.159992422793407,0.22940928106717,0.57423196411502,0,0.646413698057667,0.380046838912748,0.504060259519861,0.665191531965914,0,0,0,0.866554859253824,0.831173226792462,0.408338712524738,1.25559489221072,0,1.0470474879476,0.588231488031014,2.04913645487534,0.485510353031154,0.125896817975577,0.405507724878058,0,0.782391344348039,0,0.219686182734472,0.194429899074283,0,0,0,0,0,1.02903774414379,0.286533439938757,0.515672092277442,1.01158230429799,4.7609188134483,0,0,0,1.3498495759221,1.97773272513395,0.7104801149461,0,0.384218305321555,1.65903379693564,2.70011876663381,2.3135745748652,2.57085885963423,2.20868540951614,1.46988959057945,0.479227355091182,0,0,1.14918604276669,1.22885226604995,1.58263545276233,0.548925861614458,3.64639359389732,1.3959149950069,0.56276261003168,2.75036845998258,2.35702868378934,3.70166370077668,2.42319279572891,0.454357159999104,0.755715601067855,0.289864488701678,0,0,0.539703191637817,0.649776417447669,0,0,0.511290967734173,0,0,1.54927761754349,0,0,0,2.38140145112336,1.52015919285059,0.505524445014783,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.904335843315735,0.117588707135705,0.251333182659351,0,0,0,0.970601099684455,0.220841518460394,0,0,0,0.628340120440365,0.255457055208591,1.55759661857696,0,1.01656181658452,0.149790639404823,0,3.01570445070875,0.521472960576829,1.02286182932132,0.20778804455956,0.973447578406546,0.81471491080253,0.248813941220186,0,0.210441855886474,0.520481771850815,0.459804208866946,0.360124259610698,0.753524089178575,0.816437989815934,0.384341160854549,0.937017245597288,0,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0,0.411564272815887,0.796137067273973,0,0,0.568326998791185,0.207125772535502,0.469052119962192,0.720248245844059,0,0.196764231747404,0.462801338662135,0,0.536546802799238,0.583826711835847,0.493679549740441,0,0.0810688095458557,0.730999937126662,0,0,0,1.64647379806855,0.330418782983798,0,0.213288250535234,0.928946687441754,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,1.00534083520108,0.198956472041151,0.38992817423824,0,0.432276099749388,0.398282546508734,0,0.571242563048644,1.1270773567308,0,0.387904974335251,0.561086559122548,0.442655759869801,0.147610147979602,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0.674586337154561,0.202860121388503,0,0,0,0.972811360650212,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0.179397413521912,1.4473305640901,0,0,0.162964976442026,0.509235257325564,0,0,0,0.390267295715598,0.157635144106191,0.221464689648775,0.478364305972461,0,0.518054945597687,0.433947175744535,0,0,0,0,0,0.35163505977661,0.163934945376675,0.252470927204373,1.26203287766503,0,0.430846795465598,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0,0.321321316421807,0,0.890328018336276,1.30309567482861,0,0,0.242780636154981,0.906970670894253,0.188605079755898,0,0,0.258428293168221,1.09060118843252,1.06949213515416,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.258717367565509,0.857348140126369,0,1.07021290561242,0.329098041204242,0.304464949114599,0,0.21183207086382,0,0.16488625294148,0.161464426695906,0.241251699712623,0.358117032009409,0.164140899745061,0.291480836629851,0,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0,0.849892149969277,0.839708713941948,0.829199842826543,0,0,0,0.108005340821801,0.418176592028937,0.655087691238533,0.674321731924103,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,0.598066184175915,0.992750942742586,0.194451188344048,0.516639293910924,1.01373675294467,1.05621514781179,0.781226309063701,0.524296722128554,0.724752362478018,0.576060012515731,0,0.405450430580328,0.924398614483445,0.389762468933385,0.179026695667481,0,0.480781798079875,0.443068581523732,0,0.533447646584999,0,0.194915761479505,0.481059208201647,0.350630706544707,0.226730383615211,0,0.269141569828427,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,3.09335728218638,0,0,0,1.35096360967266,0,0.51776031175182,0.93408612825759,0,0.341467211508268,0,0.209613162627982,0,0,0,0,0.252697211763798,0,0,0.187283014939765,0.192075457214608,0.287177344778066,0,0.231768651889711,0.578727661391115,0.824171801606613,0.294397840268795,0,0.887379030796687,0.476872379894642,0.581385666529314,0.0941093804153306,0.338458431566706,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.591026894253381,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr11:60966638..60966646,- | |short_description=p@chr11:60966638..60966646,- | ||
}} | }} |
Revision as of 03:54, 15 November 2012
Short description: | p@chr11:60966638..60966646, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:60966638..60966646, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.81e-25 | 23 |
neuroblast (sensu Vertebrata) | 3.81e-25 | 23 |
neuron | 2.97e-18 | 33 |
neuronal stem cell | 2.97e-18 | 33 |
neuroblast | 2.97e-18 | 33 |
electrically signaling cell | 2.97e-18 | 33 |
electrically responsive cell | 1.88e-16 | 39 |
electrically active cell | 1.88e-16 | 39 |
ectodermal cell | 3.43e-14 | 44 |
neurectodermal cell | 3.43e-14 | 44 |
neural cell | 6.06e-13 | 43 |
embryonic cell | 2.45e-10 | 70 |
somatic stem cell | 3.15e-09 | 91 |
multi fate stem cell | 3.15e-09 | 91 |
stem cell | 2.71e-08 | 97 |
neuron of the ventral spinal cord | 5.00e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
gray matter | 3.90e-16 | 34 |
regional part of nervous system | 3.00e-12 | 54 |
regional part of spinal cord | 3.68e-12 | 5 |
gray matter of spinal cord | 3.68e-12 | 5 |
central nervous system | 5.48e-11 | 73 |
nervous system | 1.52e-10 | 75 |
neural tube | 3.03e-10 | 52 |
neural rod | 3.03e-10 | 52 |
future spinal cord | 3.03e-10 | 52 |
neural keel | 3.03e-10 | 52 |
spinal cord | 4.76e-10 | 6 |
dorsal region element | 4.76e-10 | 6 |
dorsum | 4.76e-10 | 6 |
brain grey matter | 5.20e-09 | 29 |
regional part of telencephalon | 5.20e-09 | 29 |
telencephalon | 5.20e-09 | 29 |
neurectoderm | 1.64e-08 | 64 |
neural plate | 1.64e-08 | 64 |
presumptive neural plate | 1.64e-08 | 64 |
ectoderm-derived structure | 4.87e-08 | 95 |
ectoderm | 4.87e-08 | 95 |
presumptive ectoderm | 4.87e-08 | 95 |
ventral horn of spinal cord | 5.00e-08 | 3 |
ecto-epithelium | 7.47e-08 | 73 |
basal ganglion | 3.10e-07 | 8 |
nuclear complex of neuraxis | 3.10e-07 | 8 |
aggregate regional part of brain | 3.10e-07 | 8 |
collection of basal ganglia | 3.10e-07 | 8 |
cerebral subcortex | 3.10e-07 | 8 |
regional part of forebrain | 4.41e-07 | 39 |
forebrain | 4.41e-07 | 39 |
future forebrain | 4.41e-07 | 39 |
anterior neural tube | 7.82e-07 | 40 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.