FFCP PHASE1:Mm9::chr9:108997020..108997029,+: Difference between revisions
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|id=chr9:108997020..108997029,+ | |id=chr9:108997020..108997029,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.11e-27,3;CL:0000239,2.79e-23,6;CL:0000677,2.79e-23,6;CL:0000584,2.79e-23,6;CL:0000075,5.02e-20,7;CL:0000066,5.49e-17,25;CL:0002563,1.12e-15,9;CL:0002251,1.12e-15,9;CL:0000473,2.87e-12,7;CL:0002076,1.49e-09,15;CL:0000223,3.07e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.70e-21,15;UBERON:0001962,7.02e-19,2;UBERON:0001961,7.02e-19,2;UBERON:0001744,7.02e-19,2;UBERON:0004923,1.79e-17,24;UBERON:0003350,1.12e-15,9;UBERON:0004808,1.12e-15,9;UBERON:0001277,1.12e-15,9;UBERON:0002465,6.33e-13,3;UBERON:0000485,6.71e-13,11;UBERON:0001242,5.68e-11,13;UBERON:0001262,5.68e-11,13;UBERON:0004786,5.68e-11,13;UBERON:0003199,2.01e-10,1 | |||
|phase1_expression=0,2.09385244583617,2.27499619694768,0,0,2.01455126294268,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55987876469451,3.44113921600755,4.01962374880514,3.01533397311352,3.23206849028834,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0.52091337055676,0,0,0,0,0.142371680799103,0,0,0,0,0,0.679971333707751,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0.431135985865684,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0.757736633841335,0.179397413521912,0,0,0,0,0,0.234690248288502,0,0,0.780534591431195,0,0,0,0,0.172684981865896,0,0,0,0,0.551873492609465,0,0.117211686592203,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,1.17335854031855,0,0,0.16488625294148,0,0.180938774784468,0.119372344003136,0.656563598980245,0,0.18542530201051,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.205421914329655,0.389762468933385,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0,0.0974578807397524,0.192423683280659,0,0.226730383615211,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,2.09385244583617,2.27499619694768,0,0,2.01455126294268,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55987876469451,3.44113921600755,4.01962374880514,3.01533397311352,3.23206849028834,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0.52091337055676,0,0,0,0,0.142371680799103,0,0,0,0,0,0.679971333707751,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0.431135985865684,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0.757736633841335,0.179397413521912,0,0,0,0,0,0.234690248288502,0,0,0.780534591431195,0,0,0,0,0.172684981865896,0,0,0,0,0.551873492609465,0,0.117211686592203,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,1.17335854031855,0,0,0.16488625294148,0,0.180938774784468,0.119372344003136,0.656563598980245,0,0.18542530201051,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.205421914329655,0.389762468933385,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0,0.0974578807397524,0.192423683280659,0,0.226730383615211,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr9:108997020..108997029,+ | |short_description=p@chr9:108997020..108997029,+ | ||
}} | }} |
Revision as of 00:23, 15 November 2012
Short description: | p@chr9:108997020..108997029, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:108997020..108997029, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.11e-27 | 3 |
brush border epithelial cell | 2.79e-23 | 6 |
gut absorptive cell | 2.79e-23 | 6 |
enterocyte | 2.79e-23 | 6 |
columnar/cuboidal epithelial cell | 5.02e-20 | 7 |
epithelial cell | 5.49e-17 | 25 |
intestinal epithelial cell | 1.12e-15 | 9 |
epithelial cell of alimentary canal | 1.12e-15 | 9 |
defensive cell | 2.87e-12 | 7 |
endo-epithelial cell | 1.49e-09 | 15 |
endodermal cell | 3.07e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 7.70e-21 | 15 |
gut-associated lymphoid tissue | 7.02e-19 | 2 |
mucosa-associated lymphoid tissue | 7.02e-19 | 2 |
lymphoid tissue | 7.02e-19 | 2 |
organ component layer | 1.79e-17 | 24 |
epithelium of mucosa | 1.12e-15 | 9 |
gastrointestinal system epithelium | 1.12e-15 | 9 |
intestinal epithelium | 1.12e-15 | 9 |
lymphoid system | 6.33e-13 | 3 |
simple columnar epithelium | 6.71e-13 | 11 |
intestinal mucosa | 5.68e-11 | 13 |
wall of intestine | 5.68e-11 | 13 |
gastrointestinal system mucosa | 5.68e-11 | 13 |
egg chamber | 2.01e-10 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.