FFCP PHASE1:Mm9::chr11:88155418..88155420,-: Difference between revisions
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|id=chr11:88155418..88155420,- | |id=chr11:88155418..88155420,- | ||
|ontology_enrichment_celltype=CL:0000221!5.38e-14!44;CL:0000133!5.38e-14!44;CL:0002319!2.31e-13!43;CL:0000055!3.19e-12!50;CL:0000540!2.22e-11!33;CL:0000047!2.22e-11!33;CL:0000031!2.22e-11!33;CL:0000404!2.22e-11!33;CL:0000393!6.89e-11!39;CL:0000211!6.89e-11!39;CL:0000117!2.62e-10!23;CL:0000337!2.62e-10!23 | |ontology_enrichment_celltype=CL:0000221!5.38e-14!44;CL:0000133!5.38e-14!44;CL:0002319!2.31e-13!43;CL:0000055!3.19e-12!50;CL:0000540!2.22e-11!33;CL:0000047!2.22e-11!33;CL:0000031!2.22e-11!33;CL:0000404!2.22e-11!33;CL:0000393!6.89e-11!39;CL:0000211!6.89e-11!39;CL:0000117!2.62e-10!23;CL:0000337!2.62e-10!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.63e-21,44;CL:0000133,3.63e-21,44;CL:0000540,4.52e-20,33;CL:0000047,4.52e-20,33;CL:0000031,4.52e-20,33;CL:0000404,4.52e-20,33;CL:0000393,1.16e-19,39;CL:0000211,1.16e-19,39;CL:0002319,1.19e-19,43;CL:0000117,1.62e-19,23;CL:0000337,1.62e-19,23;CL:0002321,3.38e-13,70;CL:0002609,2.87e-09,6;CL:0002612,8.93e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.17e-08!102;UBERON:0000924!1.17e-08!102;UBERON:0006601!1.17e-08!102;UBERON:0001017!9.90e-08!73;UBERON:0005743!9.90e-08!73;UBERON:0000073!1.01e-07!75;UBERON:0001016!1.01e-07!75 | |ontology_enrichment_uberon=UBERON:0004121!1.17e-08!102;UBERON:0000924!1.17e-08!102;UBERON:0006601!1.17e-08!102;UBERON:0001017!9.90e-08!73;UBERON:0005743!9.90e-08!73;UBERON:0000073!1.01e-07!75;UBERON:0001016!1.01e-07!75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.62e-10,34;UBERON:0010314,2.47e-10,92;UBERON:0001017,2.68e-10,73;UBERON:0004121,4.61e-10,95;UBERON:0000924,4.61e-10,95;UBERON:0006601,4.61e-10,95;UBERON:0001948,4.66e-10,5;UBERON:0002315,4.66e-10,5;UBERON:0001016,7.26e-10,75;UBERON:0010371,2.15e-08,73;UBERON:0002240,2.62e-08,6;UBERON:0005174,2.62e-08,6;UBERON:0001137,2.62e-08,6;UBERON:0000073,2.94e-08,54;UBERON:0002346,4.56e-07,64;UBERON:0003075,4.56e-07,64;UBERON:0007284,4.56e-07,64;UBERON:0002257,8.93e-07,3 | |||
|phase1_expression=1.60148847104794,0.348975407639361,0,0,0,0.16787927191189,0.233612640595526,0.387369970324729,0,0.70219357896598,0,0.8774937489487,0.342401459862411,0.611942816932982,0,0,0,0,0,0.42438965179803,1.27564935226605,1.78723712161594,0.522399578277871,0.319984845586813,0.68822784320151,0.57423196411502,0,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.367093504323363,0,0.65407546914134,2.41654801007919,1.1665793944457,0.839918529752175,1.43752564364972,0.167782606057736,0,0,1.02903774414379,1.14613375975503,0,0.809265843438391,1.05798195854407,0.633831403506179,0.338844532069132,0,0,0,0.7104801149461,0.898800331555214,0.768436610643109,1.65903379693564,2.43010688997043,1.47227472945967,1.42825492201902,1.32521124570968,1.83736198822431,2.01275489138296,0,1.10115880999389,0.766124028511126,1.84327839907492,1.18697658957174,0.914876436024097,0,1.67509799400829,3.37657566019008,0.916789486660861,2.94628585473668,1.28134512719193,1.3047961207771,0.075726193333184,0.68014404096107,0,0,0,0.539703191637817,0,0,0.702222100658759,0,0.259786004602869,0,1.83096445709685,0,0,0,0.649473123033642,0.253359865475099,0,0.91347103775248,0.517875767294343,0.29688427812965,0.867426633830679,0.608930956624282,0.691846491768175,1.3565037649736,0.823120949949934,0.251333182659351,0.247194967734374,0.144599356919912,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0.292780797011547,0.83778682725382,0,0.359445373517761,0,0.381210681219194,0.149790639404823,0,0,0.173824320192276,0.511430914660661,0.20778804455956,0,0,0.124406970610093,1.51633655060205,0.210441855886474,1.17108398666433,0.459804208866946,0,1.20563854268572,0.340182495756639,0.768682321709099,0.655912071918102,0.517406741478031,0.215567992932842,0,0,0,0.278047249225598,0,0.205782136407943,0.796137067273973,0,0,0.284163499395593,0.207125772535502,0.469052119962192,0.36012412292203,0.946978942340841,0.590292695242212,0.462801338662135,0.697601834251224,0.536546802799238,1.28441876603886,0.493679549740441,1.14917224855367,0.405344047729279,1.31579988682799,1.09775057645525,0.402619256281115,0.210289948564127,0.102904612379284,0,0.528901133327089,0.426576501070468,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.596869416123452,0.38992817423824,0,0.216138049874694,0.398282546508734,0,1.37098215131675,0,0.610953983535943,0.581857461502877,0.49095073923223,0.505892296994058,1.03327103585722,0.627994911365499,0.123397163921801,0,0,0,0,0,0.241177159752417,0.50925170356284,0,0.648540907100142,0,1.43768206527355,0.744281895337007,0.624075346229121,0.252578877947112,0.179397413521912,0,0.369506380333209,0.189491411770485,0.325929952884052,0.339490171550376,0.234690248288502,0,0.238043640886014,0.585400943573396,0.315270288212382,0.664394068946325,0.318909537314974,0.491589944147214,0,0.578596234326046,0,0,1.47529281905711,0,0.80275294993896,0.35163505977661,1.14754461763673,0.757412781613119,1.26203287766503,0.390438744296638,0.646270193198397,0.238968797952552,1.11399337041197,0.283076530788832,0.809621403349789,1.46127928955656,0,0,0.141940085208269,0.534196811001766,0,0.164970122972535,0,0,0.302323556964751,0.943025398779491,0.590603785761546,0.922305443831782,0.516856586336442,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0.680879211507576,1.8006109403131,0.258717367565509,0.643011105094777,0.177340233642274,0.891844088010353,0.822745103010605,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,0.18542530201051,0.170870880797853,0,0.370389054739423,0,0.410082683163076,0.228778173206523,0.679913719975421,0.69975726161829,0.690999869022119,1.90934123603023,0,0.203319467126849,0.216010681643603,0,0.436725127492355,0.269728692769641,0.41326727862668,0,0.388844919875379,0,0,0.149516546043979,0.66183396182839,0.583353565032143,0.645799117388655,0.675824501963113,0.469428954583016,0.5208175393758,0.314578033277133,0.241584120826006,0.576060012515731,0.632022241256357,0,0.308132871494482,1.03936658382236,0,0,0.360586348559907,0.147689527174577,0.100966449948148,0.304827226619999,0.302478555410522,0.194915761479505,0.384847366561318,0.467507608726276,0.226730383615211,0,0.0897138566094757,0,0.386379188064381,0,0.183151624267265,0,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0.45032120322422,0.453142408984205,0,1.24544817101012,0.399024873401031,0,0,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0.252697211763798,0,0.377252682772152,0.561849044819294,0.128050304809739,0.574354689556133,0,0.231768651889711,0.578727661391115,1.64834360321323,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.0941093804153306,0.423073039458382,0.548783918618318,0.263069711437843,0.271608227691724,0,0.355905054372522,0.29551344712669,0,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0 | |phase1_expression=1.60148847104794,0.348975407639361,0,0,0,0.16787927191189,0.233612640595526,0.387369970324729,0,0.70219357896598,0,0.8774937489487,0.342401459862411,0.611942816932982,0,0,0,0,0,0.42438965179803,1.27564935226605,1.78723712161594,0.522399578277871,0.319984845586813,0.68822784320151,0.57423196411502,0,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.367093504323363,0,0.65407546914134,2.41654801007919,1.1665793944457,0.839918529752175,1.43752564364972,0.167782606057736,0,0,1.02903774414379,1.14613375975503,0,0.809265843438391,1.05798195854407,0.633831403506179,0.338844532069132,0,0,0,0.7104801149461,0.898800331555214,0.768436610643109,1.65903379693564,2.43010688997043,1.47227472945967,1.42825492201902,1.32521124570968,1.83736198822431,2.01275489138296,0,1.10115880999389,0.766124028511126,1.84327839907492,1.18697658957174,0.914876436024097,0,1.67509799400829,3.37657566019008,0.916789486660861,2.94628585473668,1.28134512719193,1.3047961207771,0.075726193333184,0.68014404096107,0,0,0,0.539703191637817,0,0,0.702222100658759,0,0.259786004602869,0,1.83096445709685,0,0,0,0.649473123033642,0.253359865475099,0,0.91347103775248,0.517875767294343,0.29688427812965,0.867426633830679,0.608930956624282,0.691846491768175,1.3565037649736,0.823120949949934,0.251333182659351,0.247194967734374,0.144599356919912,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0.292780797011547,0.83778682725382,0,0.359445373517761,0,0.381210681219194,0.149790639404823,0,0,0.173824320192276,0.511430914660661,0.20778804455956,0,0,0.124406970610093,1.51633655060205,0.210441855886474,1.17108398666433,0.459804208866946,0,1.20563854268572,0.340182495756639,0.768682321709099,0.655912071918102,0.517406741478031,0.215567992932842,0,0,0,0.278047249225598,0,0.205782136407943,0.796137067273973,0,0,0.284163499395593,0.207125772535502,0.469052119962192,0.36012412292203,0.946978942340841,0.590292695242212,0.462801338662135,0.697601834251224,0.536546802799238,1.28441876603886,0.493679549740441,1.14917224855367,0.405344047729279,1.31579988682799,1.09775057645525,0.402619256281115,0.210289948564127,0.102904612379284,0,0.528901133327089,0.426576501070468,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.596869416123452,0.38992817423824,0,0.216138049874694,0.398282546508734,0,1.37098215131675,0,0.610953983535943,0.581857461502877,0.49095073923223,0.505892296994058,1.03327103585722,0.627994911365499,0.123397163921801,0,0,0,0,0,0.241177159752417,0.50925170356284,0,0.648540907100142,0,1.43768206527355,0.744281895337007,0.624075346229121,0.252578877947112,0.179397413521912,0,0.369506380333209,0.189491411770485,0.325929952884052,0.339490171550376,0.234690248288502,0,0.238043640886014,0.585400943573396,0.315270288212382,0.664394068946325,0.318909537314974,0.491589944147214,0,0.578596234326046,0,0,1.47529281905711,0,0.80275294993896,0.35163505977661,1.14754461763673,0.757412781613119,1.26203287766503,0.390438744296638,0.646270193198397,0.238968797952552,1.11399337041197,0.283076530788832,0.809621403349789,1.46127928955656,0,0,0.141940085208269,0.534196811001766,0,0.164970122972535,0,0,0.302323556964751,0.943025398779491,0.590603785761546,0.922305443831782,0.516856586336442,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0.680879211507576,1.8006109403131,0.258717367565509,0.643011105094777,0.177340233642274,0.891844088010353,0.822745103010605,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,0.18542530201051,0.170870880797853,0,0.370389054739423,0,0.410082683163076,0.228778173206523,0.679913719975421,0.69975726161829,0.690999869022119,1.90934123603023,0,0.203319467126849,0.216010681643603,0,0.436725127492355,0.269728692769641,0.41326727862668,0,0.388844919875379,0,0,0.149516546043979,0.66183396182839,0.583353565032143,0.645799117388655,0.675824501963113,0.469428954583016,0.5208175393758,0.314578033277133,0.241584120826006,0.576060012515731,0.632022241256357,0,0.308132871494482,1.03936658382236,0,0,0.360586348559907,0.147689527174577,0.100966449948148,0.304827226619999,0.302478555410522,0.194915761479505,0.384847366561318,0.467507608726276,0.226730383615211,0,0.0897138566094757,0,0.386379188064381,0,0.183151624267265,0,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0.45032120322422,0.453142408984205,0,1.24544817101012,0.399024873401031,0,0,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0.252697211763798,0,0.377252682772152,0.561849044819294,0.128050304809739,0.574354689556133,0,0.231768651889711,0.578727661391115,1.64834360321323,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.0941093804153306,0.423073039458382,0.548783918618318,0.263069711437843,0.271608227691724,0,0.355905054372522,0.29551344712669,0,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr11:88155418..88155420,- | |short_description=p@chr11:88155418..88155420,- | ||
}} | }} |
Revision as of 09:37, 14 November 2012
Short description: | p@chr11:88155418..88155420, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:88155418..88155420, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.63e-21 | 44 |
neurectodermal cell | 3.63e-21 | 44 |
neuron | 4.52e-20 | 33 |
neuronal stem cell | 4.52e-20 | 33 |
neuroblast | 4.52e-20 | 33 |
electrically signaling cell | 4.52e-20 | 33 |
electrically responsive cell | 1.16e-19 | 39 |
electrically active cell | 1.16e-19 | 39 |
neural cell | 1.19e-19 | 43 |
CNS neuron (sensu Vertebrata) | 1.62e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.62e-19 | 23 |
embryonic cell | 3.38e-13 | 70 |
neuron of cerebral cortex | 2.87e-09 | 6 |
neuron of the ventral spinal cord | 8.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gray matter | 1.62e-10 | 34 |
structure with developmental contribution from neural crest | 2.47e-10 | 92 |
central nervous system | 2.68e-10 | 73 |
ectoderm-derived structure | 4.61e-10 | 95 |
ectoderm | 4.61e-10 | 95 |
presumptive ectoderm | 4.61e-10 | 95 |
regional part of spinal cord | 4.66e-10 | 5 |
gray matter of spinal cord | 4.66e-10 | 5 |
nervous system | 7.26e-10 | 75 |
ecto-epithelium | 2.15e-08 | 73 |
spinal cord | 2.62e-08 | 6 |
dorsal region element | 2.62e-08 | 6 |
dorsum | 2.62e-08 | 6 |
regional part of nervous system | 2.94e-08 | 54 |
neurectoderm | 4.56e-07 | 64 |
neural plate | 4.56e-07 | 64 |
presumptive neural plate | 4.56e-07 | 64 |
ventral horn of spinal cord | 8.93e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.