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FFCP PHASE1:Mm9::chrX:149078677..149078705,-: Difference between revisions

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|id=chrX:149078677..149078705,-
|id=chrX:149078677..149078705,-
|ontology_enrichment_celltype=CL:0000540!3.55e-16!33;CL:0000047!3.55e-16!33;CL:0000031!3.55e-16!33;CL:0000404!3.55e-16!33;CL:0000221!2.16e-12!44;CL:0000133!2.16e-12!44;CL:0000393!8.31e-12!39;CL:0000211!8.31e-12!39;CL:0002319!9.67e-12!43;CL:0000117!1.10e-10!23;CL:0000337!1.10e-10!23;CL:0000055!1.90e-08!50
|ontology_enrichment_celltype=CL:0000540!3.55e-16!33;CL:0000047!3.55e-16!33;CL:0000031!3.55e-16!33;CL:0000404!3.55e-16!33;CL:0000221!2.16e-12!44;CL:0000133!2.16e-12!44;CL:0000393!8.31e-12!39;CL:0000211!8.31e-12!39;CL:0002319!9.67e-12!43;CL:0000117!1.10e-10!23;CL:0000337!1.10e-10!23;CL:0000055!1.90e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,7.72e-21,33;CL:0000047,7.72e-21,33;CL:0000031,7.72e-21,33;CL:0000404,7.72e-21,33;CL:0000221,3.33e-18,44;CL:0000133,3.33e-18,44;CL:0002319,3.99e-17,43;CL:0000393,1.68e-16,39;CL:0000211,1.68e-16,39;CL:0000117,5.02e-16,23;CL:0000337,5.02e-16,23;CL:0002321,1.40e-08,70;CL:0000107,8.95e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.37e-27!102;UBERON:0000924!1.37e-27!102;UBERON:0006601!1.37e-27!102;UBERON:0000073!9.86e-26!75;UBERON:0001016!9.86e-26!75;UBERON:0001017!2.10e-24!73;UBERON:0005743!2.10e-24!73;UBERON:0002346!2.18e-18!71;UBERON:0003075!2.18e-18!71;UBERON:0007284!2.18e-18!71;UBERON:0001049!2.90e-16!52;UBERON:0005068!2.90e-16!52;UBERON:0006241!2.90e-16!52;UBERON:0007135!2.90e-16!52;UBERON:0000033!6.40e-16!63;UBERON:0002020!3.52e-15!34;UBERON:0000955!5.95e-15!50;UBERON:0006238!5.95e-15!50;UBERON:0002616!2.65e-14!49;UBERON:0002791!1.07e-11!29;UBERON:0003528!1.07e-11!29;UBERON:0001893!1.07e-11!29;UBERON:0003056!1.05e-10!49;UBERON:0003080!1.42e-10!40;UBERON:0002780!7.34e-10!39;UBERON:0001890!7.34e-10!39;UBERON:0006240!7.34e-10!39;UBERON:0007811!1.94e-08!86;UBERON:0002021!4.82e-08!10;UBERON:0000411!4.82e-08!10;UBERON:0001950!4.82e-08!10;UBERON:0000010!1.11e-07!11;UBERON:0000153!1.36e-07!94;UBERON:0002619!1.44e-07!17;UBERON:0000956!5.40e-07!21;UBERON:0001869!5.40e-07!21;UBERON:0000203!5.40e-07!21;UBERON:0003076!6.22e-07!12;UBERON:0003057!6.22e-07!12
|ontology_enrichment_uberon=UBERON:0004121!1.37e-27!102;UBERON:0000924!1.37e-27!102;UBERON:0006601!1.37e-27!102;UBERON:0000073!9.86e-26!75;UBERON:0001016!9.86e-26!75;UBERON:0001017!2.10e-24!73;UBERON:0005743!2.10e-24!73;UBERON:0002346!2.18e-18!71;UBERON:0003075!2.18e-18!71;UBERON:0007284!2.18e-18!71;UBERON:0001049!2.90e-16!52;UBERON:0005068!2.90e-16!52;UBERON:0006241!2.90e-16!52;UBERON:0007135!2.90e-16!52;UBERON:0000033!6.40e-16!63;UBERON:0002020!3.52e-15!34;UBERON:0000955!5.95e-15!50;UBERON:0006238!5.95e-15!50;UBERON:0002616!2.65e-14!49;UBERON:0002791!1.07e-11!29;UBERON:0003528!1.07e-11!29;UBERON:0001893!1.07e-11!29;UBERON:0003056!1.05e-10!49;UBERON:0003080!1.42e-10!40;UBERON:0002780!7.34e-10!39;UBERON:0001890!7.34e-10!39;UBERON:0006240!7.34e-10!39;UBERON:0007811!1.94e-08!86;UBERON:0002021!4.82e-08!10;UBERON:0000411!4.82e-08!10;UBERON:0001950!4.82e-08!10;UBERON:0000010!1.11e-07!11;UBERON:0000153!1.36e-07!94;UBERON:0002619!1.44e-07!17;UBERON:0000956!5.40e-07!21;UBERON:0001869!5.40e-07!21;UBERON:0000203!5.40e-07!21;UBERON:0003076!6.22e-07!12;UBERON:0003057!6.22e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.07e-41,75;UBERON:0001017,1.46e-38,73;UBERON:0004121,1.07e-33,95;UBERON:0000924,1.07e-33,95;UBERON:0006601,1.07e-33,95;UBERON:0000073,9.47e-30,54;UBERON:0001049,3.19e-27,52;UBERON:0005068,3.19e-27,52;UBERON:0006241,3.19e-27,52;UBERON:0007135,3.19e-27,52;UBERON:0002020,1.37e-24,34;UBERON:0002346,6.88e-23,64;UBERON:0003075,6.88e-23,64;UBERON:0007284,6.88e-23,64;UBERON:0000955,3.32e-21,47;UBERON:0006238,3.32e-21,47;UBERON:0010371,3.83e-20,73;UBERON:0002616,3.95e-20,46;UBERON:0003528,1.32e-18,29;UBERON:0002791,1.32e-18,29;UBERON:0001893,1.32e-18,29;UBERON:0003080,1.03e-16,40;UBERON:0002780,1.70e-15,39;UBERON:0001890,1.70e-15,39;UBERON:0006240,1.70e-15,39;UBERON:0010314,1.27e-14,92;UBERON:0003056,1.89e-13,49;UBERON:0002619,3.99e-13,17;UBERON:0002021,9.92e-13,10;UBERON:0000411,9.92e-13,10;UBERON:0001950,9.92e-13,10;UBERON:0000956,9.50e-12,21;UBERON:0001869,9.50e-12,21;UBERON:0000203,9.50e-12,21;UBERON:0003076,1.01e-11,12;UBERON:0003057,1.01e-11,12;UBERON:0011216,3.58e-09,194;UBERON:0002240,3.70e-09,6;UBERON:0005174,3.70e-09,6;UBERON:0001137,3.70e-09,6;UBERON:0000010,1.17e-08,11;UBERON:0002420,2.42e-08,8;UBERON:0007245,2.42e-08,8;UBERON:0010009,2.42e-08,8;UBERON:0010011,2.42e-08,8;UBERON:0000454,2.42e-08,8;UBERON:0004111,7.26e-08,122;UBERON:0000025,9.78e-08,114;UBERON:0001948,1.34e-07,5;UBERON:0002315,1.34e-07,5;UBERON:0002950,3.23e-07,4;UBERON:0001891,3.23e-07,4;UBERON:0009616,3.23e-07,4;UBERON:0010286,3.23e-07,4;UBERON:0002410,8.95e-07,9
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,0,0,0.210324961351382,3.14216082844184,4.63823935998388,1.83736198822431,1.0543001812006,0,4.40463523997555,8.42736431362239,12.4421291937557,1.31886287730194,1.37231465403614,0.52091337055676,8.37548997004143,5.6276261003168,7.18151764551008,5.89257170947335,6.40672563595963,2.05039390407831,2.42323818666189,1.73814588245607,0,0,0,0,0,0,0.561777680527007,0,0,0,4.78867627240714,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.608930956624282,0,0.452167921657868,0.117588707135705,0.251333182659351,0,0.433798070759735,0,1.13236794963186,0.220841518460394,0.484875253135222,0,2.92780797011547,5.23616767033638,0,0,0,0,13.3313669070292,12.3525162761029,2.26177833803156,5.73620256634512,4.85859368927628,10.5971902725376,8.92326946872667,0,0.124406970610093,0,0.841767423545896,0,0,0.360124259610698,0,0.0680364991513279,0.2562274405697,0.562210347358373,1.55222022443409,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0.292399974850665,0,0.134206418760372,8.83217783969334,1.85228302282712,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0.551873492609465,16.8578119487182,15.7063660033552,0,1.00988370881749,0.631016438832513,1.95219372148319,0.861693590931196,5.9742199488138,5.79276552614225,1.98153571552183,4.45291771842384,2.04579100537918,1.18586333383957,3.85585579706168,0.567760340833074,0,0,3.79431282836832,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0.329098041204242,0.304464949114599,0,0,0,0.8244312647074,0,0.241251699712623,0.596861720015682,0.164140899745061,0.291480836629851,16.8737024829564,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0,1.13365191807606,0,0,0,0,0.187682475451182,0.549454872801795,0,0,5.64751842617067,3.22227665555024,5.72895513439397,2.23409137046794,2.74033007908257,3.7769694869485,4.05013500139084,2.70192721934532,3.17199686288943,1.55328093525546,0.207574695168353,0,0,0,0.838452650511929,0.919217542250071,1.55572709461131,0.412070114477788,1.28367683836726,0,1.01391719956096,0.377252682772152,0.655490552289177,0.512201219238954,0.631790158511746,0.476293691283074,0.347652977834566,0.578727661391115,0,0.294397840268795,0.685738504770831,0,0.953744759789284,1.0174249164263,0.658765662907314,0.507687647350059,0.73171189149109,0.789209134313529,0.543216455383447,0.561142271657738,0,0.985044823755635,0.409231043169689,0.929621047115796,0.578719832943424,0.749431733813838,1.63752125911786,0.214871054048298,1.14772999241306,1.54413993383661,3.94175320554716
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,0,0,0.210324961351382,3.14216082844184,4.63823935998388,1.83736198822431,1.0543001812006,0,4.40463523997555,8.42736431362239,12.4421291937557,1.31886287730194,1.37231465403614,0.52091337055676,8.37548997004143,5.6276261003168,7.18151764551008,5.89257170947335,6.40672563595963,2.05039390407831,2.42323818666189,1.73814588245607,0,0,0,0,0,0,0.561777680527007,0,0,0,4.78867627240714,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.608930956624282,0,0.452167921657868,0.117588707135705,0.251333182659351,0,0.433798070759735,0,1.13236794963186,0.220841518460394,0.484875253135222,0,2.92780797011547,5.23616767033638,0,0,0,0,13.3313669070292,12.3525162761029,2.26177833803156,5.73620256634512,4.85859368927628,10.5971902725376,8.92326946872667,0,0.124406970610093,0,0.841767423545896,0,0,0.360124259610698,0,0.0680364991513279,0.2562274405697,0.562210347358373,1.55222022443409,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0.292399974850665,0,0.134206418760372,8.83217783969334,1.85228302282712,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0.551873492609465,16.8578119487182,15.7063660033552,0,1.00988370881749,0.631016438832513,1.95219372148319,0.861693590931196,5.9742199488138,5.79276552614225,1.98153571552183,4.45291771842384,2.04579100537918,1.18586333383957,3.85585579706168,0.567760340833074,0,0,3.79431282836832,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0.329098041204242,0.304464949114599,0,0,0,0.8244312647074,0,0.241251699712623,0.596861720015682,0.164140899745061,0.291480836629851,16.8737024829564,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0,1.13365191807606,0,0,0,0,0.187682475451182,0.549454872801795,0,0,5.64751842617067,3.22227665555024,5.72895513439397,2.23409137046794,2.74033007908257,3.7769694869485,4.05013500139084,2.70192721934532,3.17199686288943,1.55328093525546,0.207574695168353,0,0,0,0.838452650511929,0.919217542250071,1.55572709461131,0.412070114477788,1.28367683836726,0,1.01391719956096,0.377252682772152,0.655490552289177,0.512201219238954,0.631790158511746,0.476293691283074,0.347652977834566,0.578727661391115,0,0.294397840268795,0.685738504770831,0,0.953744759789284,1.0174249164263,0.658765662907314,0.507687647350059,0.73171189149109,0.789209134313529,0.543216455383447,0.561142271657738,0,0.985044823755635,0.409231043169689,0.929621047115796,0.578719832943424,0.749431733813838,1.63752125911786,0.214871054048298,1.14772999241306,1.54413993383661,3.94175320554716
|short_description=p5@Shroom2
|short_description=p5@Shroom2
}}
}}

Revision as of 03:49, 14 November 2012

Short description:p5@Shroom2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Shroom2_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: -24bp_to_ENSMUST00000141677_5end
EntrezGene:Shroom2
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p5@Shroom2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.18
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D92.42
Mouse Schwann, donor2.CNhs12573.11746-123F91.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I25.24
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A413.33
corpus striatum, adult.CNhs10487.19-21D812.35
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D55.74
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F210.60
diencephalon, neonate N30.CNhs11201.1388-42B28.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E88.83
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C216.86
medulla oblongata, neonate N30.CNhs11200.1396-42A315.71
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.97
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G63.79
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C916.87
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system8.07e-4175
central nervous system1.46e-3873
ectoderm-derived structure1.07e-3395
ectoderm1.07e-3395
presumptive ectoderm1.07e-3395
regional part of nervous system9.47e-3054
neural tube3.19e-2752
neural rod3.19e-2752
future spinal cord3.19e-2752
neural keel3.19e-2752
gray matter1.37e-2434
neurectoderm6.88e-2364
neural plate6.88e-2364
presumptive neural plate6.88e-2364
brain3.32e-2147
future brain3.32e-2147
ecto-epithelium3.83e-2073
regional part of brain3.95e-2046
brain grey matter1.32e-1829
regional part of telencephalon1.32e-1829
telencephalon1.32e-1829
anterior neural tube1.03e-1640
regional part of forebrain1.70e-1539
forebrain1.70e-1539
future forebrain1.70e-1539
structure with developmental contribution from neural crest1.27e-1492
pre-chordal neural plate1.89e-1349
regional part of cerebral cortex3.99e-1317
occipital lobe9.92e-1310
visual cortex9.92e-1310
neocortex9.92e-1310
cerebral cortex9.50e-1221
cerebral hemisphere9.50e-1221
pallium9.50e-1221
posterior neural tube1.01e-1112
chordal neural plate1.01e-1112
organ system subdivision3.58e-09194
spinal cord3.70e-096
dorsal region element3.70e-096
dorsum3.70e-096
peripheral nervous system1.17e-0811
basal ganglion2.42e-088
nuclear complex of neuraxis2.42e-088
aggregate regional part of brain2.42e-088
collection of basal ganglia2.42e-088
cerebral subcortex2.42e-088
anatomical conduit7.26e-08122
tube9.78e-08114
regional part of spinal cord1.34e-075
gray matter of spinal cord1.34e-075
regional part of midbrain3.23e-074
midbrain3.23e-074
presumptive midbrain3.23e-074
midbrain neural tube3.23e-074
autonomic nervous system8.95e-079







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